Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00256
(680 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 59 1e-10
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 28 0.24
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 27 0.55
AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease pr... 24 3.9
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 24 5.1
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 23 8.9
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 23 8.9
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 58.8 bits (136), Expect = 1e-10
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 FLHAAELNQHEK-THSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFAR 413
F + EL +H + H+ + C + + L+ H H+ EKP+ C C A
Sbjct: 192 FTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPD 251
Query: 414 RAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
+ ++ HMR HTGE+P+SCD C A F+Q ++L
Sbjct: 252 KFKLTRHMRIHTGEKPYSCDVCFARFTQSNSL 283
Score = 58.0 bits (134), Expect = 3e-10
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 LNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDH 434
L++H KTHS + C V + F T +L+ H H+ KP+ C C+ F E+ H
Sbjct: 142 LSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRH 201
Query: 435 MR-THTGERPFSCDTCGAAFSQRSNL 509
+R HT ERP C C A + S L
Sbjct: 202 IRYRHTHERPHKCTECDYASVELSKL 227
Score = 54.4 bits (125), Expect = 3e-09
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = +3
Query: 279 SSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGER 458
S+ ++C N + L H HS ++P+ C VCE+ F A +++H+ THTG +
Sbjct: 122 STGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTK 181
Query: 459 PFSCDTCGAAFSQRSNL 509
P C C F+ L
Sbjct: 182 PHRCKHCDNCFTTSGEL 198
Score = 52.8 bits (121), Expect = 1e-08
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +3
Query: 267 EKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTH 446
+ H++ K C + +F +++ ++H H EK Y C C A + H+ H
Sbjct: 318 QNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLH 377
Query: 447 TGERPFSCDTCGAAFSQRSNL 509
T ++P+ CD C F Q+ L
Sbjct: 378 TDQKPYKCDQCAQTFRQKQLL 398
Score = 50.8 bits (116), Expect = 4e-08
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 249 AELNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVR 428
++L +H +TH+ K F C + + L H +H+ EKPY C VC F + ++
Sbjct: 225 SKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLK 284
Query: 429 DHMRTH-TGERP-FSCDTCGAAFSQRSNL 509
H H G +P F C C ++++L
Sbjct: 285 AHKMIHQVGNKPVFQCKLCPTTCGRKTDL 313
Score = 42.7 bits (96), Expect = 1e-05
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Frame = +3
Query: 264 HEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRT 443
H KTH K + C + + +LE H ++H+ +KPY C C + F ++ ++ HM
Sbjct: 345 HAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNY 404
Query: 444 HTG---------ERPFSCDTCGAAFSQRSNL 509
+ + C TC F + NL
Sbjct: 405 YHNPDYVAPTPKAKTHICPTCKRPFRHKGNL 435
Score = 41.1 bits (92), Expect = 3e-05
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 512 SHRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTCGASF 664
S TH +R H C C + FK L+ H+ +HTG +P +C C F
Sbjct: 143 SRHLKTHSEDRPHKCVVCERGFKTLASLQNHVN-THTGTKPHRCKHCDNCF 192
Score = 40.3 bits (90), Expect = 5e-05
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 527 THLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTCGASF 664
TH E+ + C CP R LE H+ HT ++P KCD C +F
Sbjct: 348 THEGEKCYRCEYCPYASISMRHLESHLLL-HTDQKPYKCDQCAQTF 392
Score = 39.1 bits (87), Expect = 1e-04
Identities = 22/54 (40%), Positives = 27/54 (50%)
Frame = +2
Query: 491 LAALQPDSHRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTC 652
LA+LQ +H + TH + H C C F L HI+ HT ERP KC C
Sbjct: 167 LASLQ--NHVN-THTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTEC 217
Score = 39.1 bits (87), Expect = 1e-04
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 515 HRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTC 652
H H +ER H C +C L+ HI+ +HTGE+P +C C
Sbjct: 201 HIRYRHTHERPHKCTECDYASVELSKLKRHIR-THTGEKPFQCPHC 245
Score = 38.7 bits (86), Expect = 2e-04
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 94 KPRTRAAGGSHRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEKSFFT 246
K ++ G ++ C C T + L HLK HS+ RP C CE+ F T
Sbjct: 117 KRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSE-DRPHKCVVCERGFKT 166
Score = 37.9 bits (84), Expect = 3e-04
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 536 NERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTCGASF 664
N+ C CP R+ L H++ HT ++P+KC C ++F
Sbjct: 294 NKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTF 336
Score = 37.5 bits (83), Expect = 4e-04
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 527 THLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTCGASF 664
TH E+ C C + L H++ HTGE+P CD C A F
Sbjct: 233 THTGEKPFQCPHCTYASPDKFKLTRHMRI-HTGEKPYSCDVCFARF 277
Score = 36.3 bits (80), Expect = 9e-04
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 85 HSLKPRTRAAGGSHRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEKSFFTQQ 252
+ + +T +RC C S L+ HL +H+D+ +P C QC ++F +Q
Sbjct: 342 YKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQ-KPYKCDQCAQTFRQKQ 396
Score = 35.9 bits (79), Expect = 0.001
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 100 RTRAAGGSHRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEKSFFT 246
+T + H+C C + F + +LQ H+ H+ +P C C+ F T
Sbjct: 147 KTHSEDRPHKCVVCERGFKTLASLQNHVNTHTG-TKPHRCKHCDNCFTT 194
Score = 33.5 bits (73), Expect = 0.006
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 124 HRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCE 231
HRC C F + L H++ RP C++C+
Sbjct: 183 HRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECD 218
Score = 33.5 bits (73), Expect = 0.006
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 100 RTRAAGGSHRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEKSFFTQQN 255
RT +C C K+ L H++IH+ +P SC C + FTQ N
Sbjct: 232 RTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGE-KPYSCDVC-FARFTQSN 281
Score = 29.5 bits (63), Expect = 0.10
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 127 RCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCE 231
+C RC TF +Y+ + H K H C +CE
Sbjct: 328 KCKRCDSTFPDRYSYKMHAKTHEGE----KCYRCE 358
Score = 26.2 bits (55), Expect = 0.96
Identities = 9/35 (25%), Positives = 15/35 (42%)
Frame = +1
Query: 124 HRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQC 228
H+C C L+ H++ H+ +P C C
Sbjct: 212 HKCTECDYASVELSKLKRHIRTHTGE-KPFQCPHC 245
Score = 26.2 bits (55), Expect = 0.96
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Frame = +3
Query: 255 LNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVH-GIVHS--------REKPYVCGVCEKAF 407
L H H+ K + C ++F + L+ H H+ + K ++C C++ F
Sbjct: 370 LESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPF 429
Query: 408 ARRAEVRDHMRTHTGERPFS 467
+ + HM H E S
Sbjct: 430 RHKGNLIRHMAMHDPESTVS 449
Score = 25.0 bits (52), Expect = 2.2
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Frame = +1
Query: 124 HRCARCRKTFASKYTLQEHLKIHSD----RPRPXS----CSQCEKSF 240
++C +C +TF K L+ H+ + + P P + C C++ F
Sbjct: 383 YKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPF 429
Score = 24.2 bits (50), Expect = 3.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 121 SHRCARCRKTFASKYTLQEHLKIH 192
+H C C++ F K L H+ +H
Sbjct: 419 THICPTCKRPFRHKGNLIRHMAMH 442
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 28.3 bits (60), Expect = 0.24
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = +3
Query: 294 FVCGV*NKSFGTQ-----HNLEVHGIVHSREKPYV-CGVCEKAFARRAEVRDHMR 440
F C + + S+ T+ H EVH I S E + C +C K F++R + + HMR
Sbjct: 349 FQCNLCDMSYRTKLQYQKHEYEVHRI--SNENFGIKCTICHKLFSQRQDYQLHMR 401
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 27.1 bits (57), Expect = 0.55
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 515 HRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASH 619
H + H + H C C ++F RR ++ H K H
Sbjct: 913 HHANIH-RPQSHECPVCGQKFTRRDNMKAHCKVKH 946
>AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease
protein.
Length = 375
Score = 24.2 bits (50), Expect = 3.9
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 73 HFAEHSLKPRTRAAGGSHRCARCRKTFASKYTLQEHLKIHSD 198
H EH KP T G + RC R R+ L++ L HSD
Sbjct: 23 HGQEH--KPCTTPNGTAGRCVRVRECGYVLDLLRKDLFAHSD 62
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 23.8 bits (49), Expect = 5.1
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 297 VCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTG 452
+CGV +S + L V H +P+V V +KA +R MR H+G
Sbjct: 729 ICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRALRGIMRNHSG 780
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.0 bits (47), Expect = 8.9
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 515 HRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASH 619
H +H +R C CP + R L H++ H
Sbjct: 541 HHFHSH-TPQRSLCPYCPASYSRIDTLRSHLRIKH 574
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 23.0 bits (47), Expect = 8.9
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 515 HRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASH 619
H +H +R C CP + R L H++ H
Sbjct: 517 HHFHSH-TPQRSLCPYCPASYSRIDTLRSHLRIKH 550
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,810
Number of Sequences: 2352
Number of extensions: 9250
Number of successful extensions: 51
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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