Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00256
(680 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 49 3e-06
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 46 2e-05
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 41 7e-04
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 41 9e-04
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 40 0.001
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 40 0.001
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 38 0.005
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 33 0.13
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 33 0.13
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 33 0.13
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 33 0.23
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 33 0.23
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 31 0.53
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 31 0.71
At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein ... 31 0.71
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 31 0.71
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 31 0.93
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 31 0.93
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 31 0.93
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 31 0.93
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 31 0.93
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 31 0.93
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 30 1.2
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 30 1.2
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 30 1.2
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 30 1.2
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 30 1.2
At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein ... 30 1.6
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 30 1.6
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 30 1.6
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 30 1.6
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 30 1.6
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 30 1.6
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 29 2.8
At4g36190.1 68417.m05149 serine carboxypeptidase S28 family prot... 29 2.8
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 29 2.8
At4g36195.1 68417.m05150 serine carboxypeptidase S28 family prot... 29 3.8
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 29 3.8
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 29 3.8
At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein ... 29 3.8
At2g37035.1 68415.m04543 expressed protein 29 3.8
At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-... 28 5.0
At4g04320.2 68417.m00617 malonyl-CoA decarboxylase family protei... 28 5.0
At4g04320.1 68417.m00616 malonyl-CoA decarboxylase family protei... 28 5.0
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 28 5.0
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 28 5.0
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 28 5.0
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 28 5.0
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 28 5.0
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 28 6.6
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 28 6.6
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 28 6.6
At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein ... 28 6.6
At3g61690.1 68416.m06913 expressed protein 28 6.6
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 28 6.6
At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein ... 28 6.6
At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein ... 28 6.6
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 28 6.6
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 25 7.4
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 27 8.7
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 27 8.7
At5g22355.1 68418.m02608 DC1 domain-containing protein contains ... 27 8.7
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 27 8.7
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 27 8.7
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +3
Query: 237 FLHAAELNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFA 410
F A+L H++ + + CG K F L +H VH E+P+ C C F
Sbjct: 1226 FESKAKLQTHKRNRCTHEG--CG---KKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFK 1280
Query: 411 RRAEVRDHMRTHTGERPFSC--DTCGAAF 491
+ +H+R HTGERP+ C D CG +F
Sbjct: 1281 WQWARTEHLRLHTGERPYICKVDGCGLSF 1309
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +2
Query: 530 HLNERRHHCAQ--CPKRFKRRRLLEYHIKASHTGERPLKC--DTCGASF 664
H +ER C+ C FK + H++ HTGERP C D CG SF
Sbjct: 1262 HKDERPFECSWKGCSMTFKWQWARTEHLRL-HTGERPYICKVDGCGLSF 1309
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 393 CEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFS 494
C K F + H R H ERPF C G + +
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMT 1278
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = +3
Query: 231 EVFLHAAELNQHEKTHSSVKDFVCGV*N--KSFGTQHNLEVHGIVHSREKPYVCGV--CE 398
+ F + L +H H + +VC K F L+ H ++H+ E+ Y+C C
Sbjct: 88 KTFFDVSALRKHSHIHGE-RQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCG 146
Query: 399 KAFARRAEVRDHMRTHTGERPFSCDTCG 482
KAF+ +R HM+TH+ E C G
Sbjct: 147 KAFSLDFNLRSHMKTHSQENYHICPYSG 174
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 360 HSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQ 497
HS K +VC C K +A +++ + H++T G R SCD CG FS+
Sbjct: 139 HSNHKQWVCERCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSR 182
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +3
Query: 360 HSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQ 497
HS K ++C C K +A +++ + H++T G R SCD CG FS+
Sbjct: 142 HSNHKQWICERCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSR 185
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = +3
Query: 237 FLHAAELNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFA 410
F +L H++ +K CG K+F + L H VHS ++P C C+ F
Sbjct: 1248 FSSEKQLMLHKRNICPIKG--CG---KNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFK 1302
Query: 411 RRAEVRDHMRTHTGERPFSC--DTCGAAF 491
+H+R HTG RP+ C CG F
Sbjct: 1303 WAWSRTEHIRVHTGARPYVCAEPDCGQTF 1331
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 360 HSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQ 497
HS K +VC C K +A +++ + H++T G R SCD CG FS+
Sbjct: 112 HSVHKQWVCERCSKGYAVQSDYKAHLKT-CGSRGHSCD-CGRVFSR 155
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGERPFSC--DTCGAAFSQRSNL 509
+ C C F + A ++ HM++H+ ER F+C D C A++ ++ +L
Sbjct: 66 HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHL 111
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +2
Query: 461 VLVRHVRRGVLAALQPDSHRSATHLNER---RHHCAQCPKRFKRRRLLEYHIKASHTGER 631
++ +H++ L+ + A ++E H C +C FK+ L+ H++ SH+ ER
Sbjct: 34 LITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQECGAEFKKPAHLKQHMQ-SHSLER 92
Query: 632 PLKC--DTCGASFVYPEH 679
C D C AS+ +H
Sbjct: 93 SFTCYVDDCAASYRRKDH 110
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 470 RHVRRGVLAALQPDSHRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKC-- 643
+H+++ + L+ +H + E + C F + L+ H+KA H RP C
Sbjct: 283 KHLKKNIKRHLR--THDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGF 340
Query: 644 DTCGASFVY 670
CG F Y
Sbjct: 341 PGCGMRFAY 349
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = +3
Query: 237 FLHAAELNQHEKTHSSVKDFVCGV*N--KSFGTQHNLEVHGIVHSREKPYVCGV--CEKA 404
F A L QH ++HS + F C V + S+ + +L H + H + K + C C+
Sbjct: 75 FKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTH-KGKLFKCPKENCKSE 133
Query: 405 FARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
F+ + V H++ + D G + N
Sbjct: 134 FSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDKDN 167
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 20/99 (20%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS-------------REKPYVCGV--C--- 395
KT + FVC + NK F NL++H H+ R+K YVC V C
Sbjct: 53 KTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHH 112
Query: 396 --EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + C+ C ++ +S+
Sbjct: 113 DPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSD 151
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 545 RHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTC 652
RH C C K F RR L H+K S+ +C C
Sbjct: 16 RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVC 51
Score = 32.3 bits (70), Expect = 0.31
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +1
Query: 82 EHSLKP-RTRAAGGSHRCARCRKTFASKYTLQEHLKI--HS-DRPRPXSCSQCEKSF 240
+ L P + R HRC C K F + L EH+KI HS +PR C + KSF
Sbjct: 2 DSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSF 58
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 545 RHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTC 652
RH C C K F RR L H+K S+ +C C
Sbjct: 16 RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVC 51
Score = 32.3 bits (70), Expect = 0.31
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +1
Query: 82 EHSLKP-RTRAAGGSHRCARCRKTFASKYTLQEHLKI--HS-DRPRPXSCSQCEKSF 240
+ L P + R HRC C K F + L EH+KI HS +PR C + KSF
Sbjct: 2 DSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSF 58
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 363 SREKPYVCGVCEKAFARRAEVRDHMRTHTGER 458
S+ +PY+C CE+ F+ + HM H +R
Sbjct: 16 SQARPYICEFCERGFSNAQALGGHMNIHRKDR 47
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 21/100 (21%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS--------------REKPYVC--GVC-- 395
KT + FVC + NK F NL++H H+ R+K YVC C
Sbjct: 91 KTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEASCVH 150
Query: 396 ---EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + CD C ++ +S+
Sbjct: 151 HDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 190
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 339 LEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
L+ H KP+ CG C KA A + + R H + + G + + C TCG+ F + +L
Sbjct: 252 LQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEK-NCG-KLWYC-TCGSDFKHKRSL 305
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 31.1 bits (67), Expect = 0.71
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 20/99 (20%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS-------------REKPYVCG--VC--- 395
KT + FVC + NK F NL++H H+ ++K YVC C
Sbjct: 55 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHH 114
Query: 396 --EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + CD C ++ +S+
Sbjct: 115 DPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 153
>At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 251
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +3
Query: 300 CGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTH 446
C KS Q++ +H + + + PY C C F + HM +H
Sbjct: 143 CEENEKSDDAQYDGRIHSLPYKKYGPYTCPKCNSIFDTSQKFAAHMSSH 191
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.1 bits (67), Expect = 0.71
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 339 LEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
L+ H KP+ C +C KAFA + + R H + + G + + C +CG+ F + +L
Sbjct: 249 LQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEK-NCG-KLWYC-SCGSDFKHKRSL 302
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 LNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDH 434
L H K K F C + K+F + + H + K + C C F + ++DH
Sbjct: 249 LQTHYKRKHGSKPFACRMCGKAFAVKGDWRTH--EKNCGKLWYCS-CGSDFKHKRSLKDH 305
Query: 435 MRTH-TGERPFSCDTCG 482
++ G P D+ G
Sbjct: 306 VKAFGNGHVPCGIDSFG 322
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGE 455
+ C +C K F R A +R HMR H E
Sbjct: 217 HYCQICGKGFKRDANLRMHMRAHGDE 242
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 333 HNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
H HGI KP++C C KAFA R + R H + + G + + C CG+ F + +L
Sbjct: 291 HYKRKHGI-----KPFMCRKCGKAFAVRGDWRTHEK-NCG-KLWYC-ICGSDFKHKRSL 341
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +3
Query: 255 LNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDH 434
L H K +K F+C K+F + + H + K + C +C F + ++DH
Sbjct: 288 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTH--EKNCGKLWYC-ICGSDFKHKRSLKDH 344
Query: 435 MR 440
++
Sbjct: 345 IK 346
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 423 VRDHMRTHTGERPFSCDTCGAAFSQRSN 506
++ H + G +PF C CG AF+ R +
Sbjct: 288 LQTHYKRKHGIKPFMCRKCGKAFAVRGD 315
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 363 SREKPYVCGVCEKAFARRAEVRDHMRTHTGERP 461
S+ PY C VCEKAF + H +H + P
Sbjct: 101 SKNLPYKCNVCEKAFPSYQALGGHKASHRIKPP 133
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 30.7 bits (66), Expect = 0.93
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 20/99 (20%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS-------------REKPYVC--GVC--- 395
KT + F+C V NK F + NL++H H+ + K Y+C C
Sbjct: 73 KTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHH 132
Query: 396 --EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + CD C ++ +S+
Sbjct: 133 DPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSD 171
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 470 RHVRRGVLAALQPDSHRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKC-- 643
+H+++ + L+ +H + E + C F + L+ H+KA H RP C
Sbjct: 195 KHLKKNIKRHLR--THDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGF 252
Query: 644 DTCGASFVY 670
CG F Y
Sbjct: 253 PGCGMRFAY 261
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 30.7 bits (66), Expect = 0.93
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 20/99 (20%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS-------------REKPYVC--GVC--- 395
KT + F+C V NK F + NL++H H+ R K Y+C C
Sbjct: 74 KTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHH 133
Query: 396 --EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + CD C ++ +S+
Sbjct: 134 DPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSD 172
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 369 EKPYVCGVCEKAFARRAEVRDHMRTHT 449
+K +C VC+K+F+ + HMR HT
Sbjct: 6 KKTKICQVCKKSFSNGKALGGHMRAHT 32
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 515 HRSATHLNER-RHHCAQCPKRFKRRRLLEYHIKAS-HTGERPLKCDTC 652
+RS+ +E R+ CA C ++F + L H+K S H+G P C C
Sbjct: 3 YRSSMESSETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEP-TCGVC 49
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 124 HRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEK 234
++CA C + F L EH+KI +C C+K
Sbjct: 15 NKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKK 51
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = +2
Query: 554 CAQCPKRFKRRRLLEYHIKASHTGE-----RPLKCDTCGASF 664
CA C F RR+LLE H++ H + L+C CG+ F
Sbjct: 498 CAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHF 539
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 20/99 (20%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS-------------REKPYVC--GVC--- 395
KT + F+C V NK F + NL++H H+ + K Y+C C
Sbjct: 75 KTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHH 134
Query: 396 --EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + C+ C ++ +S+
Sbjct: 135 DPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSD 173
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 21/100 (21%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS--------------REKPYVCGV--C-- 395
KT + F+C V NK F NL++H H+ R+K YVC C
Sbjct: 84 KTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVH 143
Query: 396 ---EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + C+ C ++ +S+
Sbjct: 144 HHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSD 183
>At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 287
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 82 EHSLKPRTRAAGGSHRCARCRKTFASKYTLQEHLK 186
E S + +T + G+ C C +TF S+ LQ H K
Sbjct: 246 ETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTK 280
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 21/92 (22%)
Frame = +3
Query: 294 FVCGV*NKSFGTQHNLEVHGIVHS--------------REKPYVCGV--CEKAFARRA-- 419
FVC + NK F NL++H H+ ++K Y+C + C A RA
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALG 141
Query: 420 ---EVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
++ H GE+ + C+ C ++ +S+
Sbjct: 142 DLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSD 173
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 515 HRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTCGASF 664
H S H E++ C +C K++ + + H K G R KCD CG F
Sbjct: 149 HYSRKH-GEKKWKCEKCSKKYAVQSDWKAHAKT--CGTREYKCD-CGTLF 194
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 333 HNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMR 440
+ LE G+V E PY CGVC++ F ++ +H +
Sbjct: 103 NKLENKGLVKPPE-PYFCGVCDRRFYTNEKLINHFK 137
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGE 455
+ C +C K F R A +R HMR H E
Sbjct: 244 HFCTICGKGFKRDANLRMHMRGHGDE 269
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGE 455
+ C +C K F R A +R HMR H E
Sbjct: 244 HFCTICGKGFKRDANLRMHMRGHGDE 269
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 366 REKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCD 473
+E+ +VC C K F + H+RTH E D
Sbjct: 5 KERKFVCKFCSKRFPCGKSLGGHIRTHMNENSADSD 40
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 127 RCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCE 231
RC C K F S L H+ HS+R + SQ +
Sbjct: 94 RCRECGKGFVSSKALCGHMACHSEREKIVMDSQSD 128
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 336 NLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTG 452
+L V+G S+ K + CG+C F + HMR H G
Sbjct: 216 SLVVYGKA-SKNKVHECGICGAEFTSGQALGGHMRRHRG 253
>At4g36190.1 68417.m05149 serine carboxypeptidase S28 family protein
contains Pfam PF05577: Serine carboxypeptidase S28
Length = 493
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 285 VKDFVCGV*---NKSFGTQHNLEVHGIVHSREKPYVCGVC-EKAFARRAEVRDHMRTHTG 452
V++F GV +K++ +H L+ + S ++ + VC E A+ + A D +R+H
Sbjct: 304 VREFCMGVFGQSSKTYSRKHLLDTAVTLESADRLWWFQVCTEVAYFQVAPANDSIRSHQI 363
Query: 453 ERPFSCDTCGAAFSQ 497
+ D C + F +
Sbjct: 364 NTEYHLDLCKSLFGK 378
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 354 IVHSREKPYVCGVCEKAFARRAEVRDHMRTH 446
+ H + P +C VC K FA V H+R H
Sbjct: 134 LTHLPQGPPMCNVCGKGFASWKAVFGHLRQH 164
>At4g36195.1 68417.m05150 serine carboxypeptidase S28 family protein
contains Pfam PF05577: Serine carboxypeptidase S28
Length = 488
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 297 VCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVC-EKAFARRAEVRDHMRTHTGERPFSCD 473
V G+ +K++ +H L+ S ++ + VC E A+ + A D +R+H + D
Sbjct: 311 VFGLSSKTYSRKHLLDTAVTPESADRLWWFQVCTEVAYFQVAPANDSIRSHQINTEYHLD 370
Query: 474 TCGAAFSQ 497
C + F +
Sbjct: 371 LCKSLFGK 378
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 21/92 (22%)
Frame = +3
Query: 294 FVCGV*NKSFGTQHNLEVHGIVHS--------------REKPYVC--GVC-----EKAFA 410
F+C V NK F NL++H H+ ++K Y+C C +A
Sbjct: 68 FICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHHDPARALG 127
Query: 411 RRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
++ H GE+ + CD C ++ S+
Sbjct: 128 DLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSD 159
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 423 VRDHMRTHTGERPFSCDTCGAAFSQRSN 506
++ H + G RPF+C CG AF+ + +
Sbjct: 327 LQTHYKRKHGVRPFACRRCGKAFAVKGD 354
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
+P+ C C KAFA + + R H + + G + + C +CG+ F + +L
Sbjct: 338 RPFACRRCGKAFAVKGDWRTHEK-NCG-KLWYC-SCGSDFKHKRSL 380
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 587 RLLEYHIKASHTGERPLKCDTCGASF 664
R L+ H K H G RP C CG +F
Sbjct: 325 RTLQTHYKRKH-GVRPFACRRCGKAF 349
>At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 353
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 124 HRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEK 234
HRC C K F++ TL H H R R S SQ ++
Sbjct: 284 HRCGLCHKVFSTYQTLGGHQTFH--RMRNKSKSQTKR 318
>At2g37035.1 68415.m04543 expressed protein
Length = 433
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -2
Query: 430 SLTSALLANAFSHTPHTYGFSREWTMPCTSRLCCVPNDLFQT----PHTKSL 287
SL S L N+ SHTP + R +RL + +D F T PH +SL
Sbjct: 72 SLLSRLPLNSRSHTPTRFNHHRRAPFLQLTRLGTLDDDFFSTDEHDPHRRSL 123
>At5g54360.1 68418.m06769 zinc finger (C2H2 type) family
protein-related contains Prosite:PS00028: Zinc finger,
C2H2 type, domain.
Length = 270
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 121 SHRCARCRKTFASKYTLQEHLKIH 192
SH C C++ F S + L H+K H
Sbjct: 80 SHTCRFCKRNFKSCFALGGHMKCH 103
>At4g04320.2 68417.m00617 malonyl-CoA decarboxylase family protein
contains weak similarity to Malonyl-CoA decarboxylase,
mitochondrial precursor (EC 4.1.1.9) (MCD)
(Swiss-Prot:O95822) [Homo sapiens]; contains Pfam
profile PF05292: Malonyl-CoA decarboxylase (MCD)
Length = 517
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 663 KDAPHVSHFSGRSPVCEALMWYSSNLLRLNR 571
KD PHVS F+ SP+ + W S L +R
Sbjct: 329 KDMPHVSTFATLSPIPGFMQWLLSKLSSQSR 359
>At4g04320.1 68417.m00616 malonyl-CoA decarboxylase family protein
contains weak similarity to Malonyl-CoA decarboxylase,
mitochondrial precursor (EC 4.1.1.9) (MCD)
(Swiss-Prot:O95822) [Homo sapiens]; contains Pfam
profile PF05292: Malonyl-CoA decarboxylase (MCD)
Length = 518
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 663 KDAPHVSHFSGRSPVCEALMWYSSNLLRLNR 571
KD PHVS F+ SP+ + W S L +R
Sbjct: 330 KDMPHVSTFATLSPIPGFMQWLLSKLSSQSR 360
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 91 LKPRTRAAGGSHRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEKS 237
L+ R ++ + C C K F L H K+H R + +Q E S
Sbjct: 87 LQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENS 135
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 118 GSHRCARCRKTFASKYTLQEHLKIHSDR 201
G RC C K F + ++L H++ H DR
Sbjct: 117 GKIRCCLCGKEFQTMHSLFGHMRRHPDR 144
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 112 AGGSHRCARCRKTFASKYTLQEHLKIHSDR 201
+G +HRC C + F+S L H++ H ++
Sbjct: 207 SGMNHRCNICSRVFSSGQALGGHMRCHWEK 236
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 339 LEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
L+ H KP+ C +C K A + + R H + + G+R + C CG+ F + +L
Sbjct: 216 LQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEK-NCGKR-WVC-VCGSDFKHKRSL 269
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 103 TRAAGGSHRCARCRKTFASKYTLQEHLKIH 192
T +G SH C C K+F S L H + H
Sbjct: 129 TTGSGKSHVCTICNKSFPSGQALGGHKRCH 158
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 112 AGGSHRCARCRKTFASKYTLQEHLKIHSD 198
+G H C+ C K+FAS L H + H D
Sbjct: 160 SGKIHTCSICFKSFASGQALGGHKRCHYD 188
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTH 446
K +VC +C K+FA + H R H
Sbjct: 146 KSHVCSICHKSFATGQALGGHKRCH 170
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 369 EKPYVCGVCEKAFARRAEVRDHMRTHTG 452
EK + C +C+ F+ + HMR H G
Sbjct: 189 EKTHECSICKAEFSSGQALGGHMRRHRG 216
>At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 271
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 354 IVHSREKPYVCGVCEKAFARRAEVRDHMRTH 446
+ H + P VC +C + F V HMR H
Sbjct: 130 LTHPPKGPPVCHICGRGFGSWKAVFGHMRAH 160
>At3g61690.1 68416.m06913 expressed protein
Length = 1303
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 266 REDALQRQGLRVRSLKQVVRHAAQPGGARHRPLP 367
R D+++++ L +L VR++A RH P P
Sbjct: 531 RVDSIRKKSLESETLSSGVRYSADSSSVRHTPSP 564
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 363 SREKPYVCGVCEKAFARRAEVRDHMRTHTG 452
S K + CG+C F + HMR H G
Sbjct: 256 SNNKVHECGICGAEFTSGQALGGHMRRHRG 285
>At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 329
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 291 DFVCGV*NKSFGTQHNL-EVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTH 446
D++ N+ HN H + + + PY C C F + HM +H
Sbjct: 214 DYIESQENEKSNNDHNDGRTHSLPYEKYGPYTCPKCNGVFNTSQKFAAHMSSH 266
>At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein
(ZFP1) identical to zinc finger protein, ZFP1
gi|790673|gb|AAA87297; contains zinc finger, C2H2 type,
domain, Prosite:PS00028
Length = 228
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 145 KTFASKYTLQEHLKIHSDRPRPXSCSQCEKSFFTQQ 252
KT +S + +H + PR SC+ C++ F++ Q
Sbjct: 46 KTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQ 81
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/35 (28%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 91 LKPRTRAAGGS-HRCARCRKTFASKYTLQEHLKIH 192
++P+ A G H+C+ C + F++ +L H ++H
Sbjct: 786 MRPKKLAPSGKIHKCSICHREFSTGQSLGGHKRLH 820
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 25.4 bits (53), Expect(2) = 7.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 363 SREKPYVCGVCEKAFARRAEVRDHMRTH 446
S +VC +C K+F+ + H R H
Sbjct: 406 SHNGDHVCNICHKSFSTGQALGGHKRCH 433
Score = 20.6 bits (41), Expect(2) = 7.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 297 VCGV*NKSFGTQHNLEVHGIVHSREK 374
VC NKSF + L H H++ K
Sbjct: 343 VCVTCNKSFSSYQALGGHRASHNKVK 368
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 14/64 (21%)
Frame = +1
Query: 103 TRAAGGSHRCARCRKTFASKYTLQEHLKIH--------SDRPRPXS------CSQCEKSF 240
T A S++C C KTF+S L H H +D+ P + CS C KSF
Sbjct: 68 TVAEKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSF 127
Query: 241 FTQQ 252
T Q
Sbjct: 128 ATGQ 131
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTH 446
K +VC VC K+FA + H R H
Sbjct: 116 KSHVCSVCGKSFATGQALGGHKRCH 140
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 124 HRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEK 234
++C C + F K L EH++I +C C K
Sbjct: 6 NKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNK 42
>At5g22355.1 68418.m02608 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain; similar to ULI3 [Arabidopsis
thaliana] GI:17225050
Length = 664
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 172 QEHLKIHSDRPRPXSCSQCEKSFF 243
Q LK+H+ P C+ C K+FF
Sbjct: 70 QHTLKLHNSLRNPCKCNLCGKTFF 93
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 112 AGGSHRCARCRKTFASKYTLQEHLKIHSD 198
+G +H C+ C K+F S L H + H D
Sbjct: 145 SGKTHNCSICFKSFPSGQALGGHKRCHYD 173
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/72 (23%), Positives = 25/72 (34%)
Frame = +3
Query: 243 HAAELNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAE 422
H A + +KT + G N E G++ K Y C C + F
Sbjct: 5 HLASFSNRDKTQEEEGEDGNGDNRVIMNHYKNYEA-GLIPWPPKNYTCSFCRREFRSAQA 63
Query: 423 VRDHMRTHTGER 458
+ HM H +R
Sbjct: 64 LGGHMNVHRRDR 75
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,905,130
Number of Sequences: 28952
Number of extensions: 176727
Number of successful extensions: 943
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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