Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00255
(462 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62910 Cluster: 60S ribosomal protein L32; n=83; Eukary... 138 5e-32
UniRef50_A2R659 Cluster: Contig An15c0220, complete genome; n=7;... 106 2e-22
UniRef50_UPI00005A1969 Cluster: PREDICTED: similar to 60S riboso... 101 6e-21
UniRef50_P49211 Cluster: 60S ribosomal protein L32-1; n=72; Euka... 100 1e-20
UniRef50_Q0J0S1 Cluster: Os09g0501200 protein; n=1; Oryza sativa... 99 4e-20
UniRef50_P34040 Cluster: 60S ribosomal protein L32; n=1; Hypocre... 93 2e-18
UniRef50_P38061 Cluster: 60S ribosomal protein L32; n=39; Eukary... 91 8e-18
UniRef50_Q9NGS3 Cluster: 60S ribosomal protein L32; n=8; Trypano... 89 3e-17
UniRef50_Q7R1L8 Cluster: GLP_28_64726_64316; n=1; Giardia lambli... 84 1e-15
UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S riboso... 82 7e-15
UniRef50_A0DPG3 Cluster: Chromosome undetermined scaffold_59, wh... 81 1e-14
UniRef50_Q8SS18 Cluster: 60S ribosomal protein L32; n=1; Encepha... 80 2e-14
UniRef50_Q9SEV3 Cluster: 60S ribosomal protein L32; n=1; Guillar... 77 1e-13
UniRef50_Q9XFE3 Cluster: 60S ribosomal protein; n=1; Oryza sativ... 73 4e-12
UniRef50_UPI00005A3317 Cluster: PREDICTED: similar to 60S riboso... 72 7e-12
UniRef50_Q1RQD0 Cluster: Ribosomal protein L32; n=1; Nyctotherus... 63 3e-09
UniRef50_UPI00015537AF Cluster: PREDICTED: hypothetical protein;... 61 1e-08
UniRef50_A2F2J1 Cluster: Ribosomal protein L32, putative; n=5; T... 60 2e-08
UniRef50_Q3LWI6 Cluster: Ribosomal protein L32; n=1; Bigelowiell... 60 3e-08
UniRef50_O26128 Cluster: 50S ribosomal protein L32e; n=3; Methan... 52 5e-06
UniRef50_A0RUF7 Cluster: Ribosomal protein L32E; n=2; Thermoprot... 52 8e-06
UniRef50_Q9YF92 Cluster: 50S ribosomal protein L32e; n=2; Desulf... 52 8e-06
UniRef50_Q96BP1 Cluster: RPL32P3 protein; n=2; Catarrhini|Rep: R... 49 4e-05
UniRef50_Q975J7 Cluster: 50S ribosomal protein L32e; n=3; Sulfol... 49 4e-05
UniRef50_UPI00015BB237 Cluster: LSU ribosomal protein L32E; n=1;... 49 6e-05
UniRef50_Q1VH30 Cluster: 50S ribosomal protein L32e; n=3; cellul... 49 6e-05
UniRef50_Q9UX90 Cluster: 50S ribosomal protein L32e; n=2; Sulfol... 48 1e-04
UniRef50_Q8ZVV9 Cluster: 50S ribosomal protein L32e; n=5; Archae... 46 5e-04
UniRef50_P54010 Cluster: 50S ribosomal protein L32e; n=10; Eurya... 46 5e-04
UniRef50_Q8TRT0 Cluster: 50S ribosomal protein L32e; n=6; Methan... 46 5e-04
UniRef50_O28371 Cluster: 50S ribosomal protein L32e; n=2; Euryar... 46 5e-04
UniRef50_A3H8Q6 Cluster: Ribosomal protein L32e; n=1; Caldivirga... 44 0.001
UniRef50_A2SPL9 Cluster: Ribosomal protein L32e; n=2; Methanomic... 44 0.001
UniRef50_A3DNC4 Cluster: Ribosomal protein L32e; n=1; Staphyloth... 44 0.002
UniRef50_Q2FSG6 Cluster: Ribosomal protein L32e; n=1; Methanospi... 43 0.003
UniRef50_A7I5Q6 Cluster: Ribosomal protein L32e; n=1; Candidatus... 43 0.004
UniRef50_Q74MV8 Cluster: 50S ribosomal protein L32e; n=1; Nanoar... 42 0.009
UniRef50_A2VEI8 Cluster: IP17707p; n=1; Drosophila melanogaster|... 40 0.026
UniRef50_Q0W1X1 Cluster: Putative 50S ribosomal protein L32E; n=... 38 0.080
UniRef50_Q6L1B0 Cluster: 50S ribosomal protein L32e; n=5; Euryar... 38 0.14
UniRef50_A1RWR9 Cluster: Ribosomal protein L32e; n=1; Thermofilu... 37 0.24
UniRef50_A4RVQ1 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 0.75
UniRef50_Q01E89 Cluster: Chromosome 02 contig 1, DNA sequence; n... 34 1.3
UniRef50_Q2W4D7 Cluster: Lipid-A-disaccharide synthase; n=4; Rho... 33 2.3
UniRef50_Q45W16 Cluster: ATP-binding cassette, sub-family G, mem... 33 3.0
UniRef50_Q6PB51 Cluster: Coiled-coil domain-containing protein 1... 33 3.0
UniRef50_P12736 Cluster: 50S ribosomal protein L32e; n=5; Haloba... 33 4.0
UniRef50_UPI000155C280 Cluster: PREDICTED: similar to DNA bindin... 32 7.0
UniRef50_Q3JR04 Cluster: Putative uncharacterized protein; n=2; ... 32 7.0
UniRef50_A3ZQV8 Cluster: Putative uncharacterized protein; n=1; ... 32 7.0
UniRef50_A0DX60 Cluster: Chromosome undetermined scaffold_68, wh... 32 7.0
UniRef50_A1HRM4 Cluster: Putative uncharacterized protein; n=1; ... 31 9.2
UniRef50_Q4XZG1 Cluster: Putative uncharacterized protein; n=1; ... 31 9.2
>UniRef50_P62910 Cluster: 60S ribosomal protein L32; n=83;
Eukaryota|Rep: 60S ribosomal protein L32 - Homo sapiens
(Human)
Length = 135
Score = 138 bits (334), Expect = 5e-32
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 220
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 221 NKKTRHMLPNG 253
NKKT+HMLP+G
Sbjct: 63 NKKTKHMLPSG 73
Score = 99.5 bits (237), Expect = 3e-20
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P RK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 424 SQENE 438
S+ENE
Sbjct: 131 SEENE 135
>UniRef50_A2R659 Cluster: Contig An15c0220, complete genome; n=7;
Trichocomaceae|Rep: Contig An15c0220, complete genome -
Aspergillus niger
Length = 179
Score = 106 bits (255), Expect = 2e-22
Identities = 48/73 (65%), Positives = 59/73 (80%)
Frame = +2
Query: 35 KMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGY 214
KM + + P IVKKRTKRF RHQSDR+ + +WRKP+GIDNRVRRRF+G MP+IGY
Sbjct: 48 KMVLAKKHVP-IVKKRTKRFWRHQSDRFKCVPESWRKPKGIDNRVRRRFRGNIPMPSIGY 106
Query: 215 GSNKKTRHMLPNG 253
GSNKKT+HM+P+G
Sbjct: 107 GSNKKTKHMMPSG 119
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P + LVHN K++E+L+M NR Y AEIA VSS+KR I+ +A+ L ++VTN R+
Sbjct: 117 PSGHKAFLVHNPKDVELLLMHNRTYAAEIASAVSSRKRVDIIAKAKALGVKVTNPKGRVT 176
Query: 424 SQ 429
++
Sbjct: 177 TE 178
>UniRef50_UPI00005A1969 Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 60S ribosomal protein L32 - Canis familiaris
Length = 204
Score = 101 bits (243), Expect = 6e-21
Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
Frame = +2
Query: 38 MAIRPVYRPTIVK--KRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 211
++IRP+ +P IVK KRTK+FI+ QSD+Y K+K NW KPRG+ NRV RRFK Q LMPN G
Sbjct: 59 LSIRPLGKPKIVKIKKRTKKFIQLQSDQYAKIKHNWWKPRGVGNRVLRRFKDQILMPNTG 118
Query: 212 YGSNKKTRHMLPNGSVRS*FTMLKSWKS**CKTGSTAQRSLTVS 343
Y SNKKT+ ML +G + +K + ST QR LTVS
Sbjct: 119 YRSNKKTKPMLLSGFEKFLVYNIKEVEVLLMCNKSTIQRLLTVS 162
>UniRef50_P49211 Cluster: 60S ribosomal protein L32-1; n=72;
Eukaryota|Rep: 60S ribosomal protein L32-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 100 bits (240), Expect = 1e-20
Identities = 45/72 (62%), Positives = 58/72 (80%)
Frame = +2
Query: 38 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 217
MA+ P+ +VKKR+ +FIR QSDR +K +WR+P+GID+RVRR+FKG LMPN+GYG
Sbjct: 1 MAV-PLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 59
Query: 218 SNKKTRHMLPNG 253
S+KKTRH LPNG
Sbjct: 60 SDKKTRHYLPNG 71
Score = 95.5 bits (227), Expect = 5e-19
Identities = 45/67 (67%), Positives = 51/67 (76%)
Frame = +1
Query: 238 YAPKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAAR 417
Y P +K +VHN ELE+LMM NR YCAEIAH VS+KKRK IVERA QL + VTN AR
Sbjct: 67 YLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTNRLAR 126
Query: 418 LRSQENE 438
LRSQE+E
Sbjct: 127 LRSQEDE 133
>UniRef50_Q0J0S1 Cluster: Os09g0501200 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0501200 protein -
Oryza sativa subsp. japonica (Rice)
Length = 186
Score = 99.1 bits (236), Expect = 4e-20
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = +2
Query: 50 PVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 229
P+ IVKKR K+F R SDRY LK +WR+P+GID+RVRR+FKG LMPNIGYGS+KK
Sbjct: 64 PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKK 123
Query: 230 TRHMLPN 250
TRH LPN
Sbjct: 124 TRHYLPN 130
Score = 36.3 bits (80), Expect = 0.32
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 238 YAPKWIRKVLVHNVKELEILMMQNR 312
Y P +K +VHNV ELE+LMM NR
Sbjct: 127 YLPNKFKKFVVHNVSELELLMMHNR 151
>UniRef50_P34040 Cluster: 60S ribosomal protein L32; n=1; Hypocrea
lixii|Rep: 60S ribosomal protein L32 - Trichoderma
harzianum (Hypocrea lixii)
Length = 137
Score = 93.5 bits (222), Expect = 2e-18
Identities = 40/62 (64%), Positives = 48/62 (77%)
Frame = +2
Query: 68 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 247
IVKK F RHQSDR+D++ +WRKP+GID RVRRRF+G MP IGYGSNKKTR + P
Sbjct: 10 IVKKHKTTFARHQSDRFDRVGSSWRKPKGIDGRVRRRFRGTIRMPKIGYGSNKKTRFLTP 69
Query: 248 NG 253
+G
Sbjct: 70 SG 71
>UniRef50_P38061 Cluster: 60S ribosomal protein L32; n=39;
Eukaryota|Rep: 60S ribosomal protein L32 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 130
Score = 91.5 bits (217), Expect = 8e-18
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 62 PTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHM 241
P IVKK TK+F RH SDRY ++ NWRK +GID+ VRRRF+G P IGYGSNKKT+ +
Sbjct: 7 PKIVKKHTKKFKRHHSDRYHRVAENWRKQKGIDSVVRRRFRGNISQPKIGYGSNKKTKFL 66
Query: 242 LPNG 253
P+G
Sbjct: 67 SPSG 70
Score = 59.3 bits (137), Expect = 4e-08
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +1
Query: 241 APKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARL 420
+P + LV NVK+LE L M + Y AEIAH +S+K R +I+ RA+ L I+VTN RL
Sbjct: 67 SPSGHKTFLVANVKDLETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVTNPKGRL 126
>UniRef50_Q9NGS3 Cluster: 60S ribosomal protein L32; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L32 -
Leishmania donovani
Length = 134
Score = 89.4 bits (212), Expect = 3e-17
Identities = 37/70 (52%), Positives = 53/70 (75%)
Frame = +2
Query: 44 IRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSN 223
++P IVKKRTKRF RH+ + + +L +WRKPRG D+ VRRR+KGQ +MPN GYGS+
Sbjct: 2 VKPTVSKAIVKKRTKRFTRHRYELFPQLSSSWRKPRGEDSPVRRRYKGQKVMPNKGYGSD 61
Query: 224 KKTRHMLPNG 253
+ T+++ P+G
Sbjct: 62 RATKYITPSG 71
Score = 55.2 bits (127), Expect = 7e-07
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = +1
Query: 268 VHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARL 420
++NV++L +L+MQNRKY I+H V ++KRK I +A +L +R+ N A+L
Sbjct: 78 INNVEDLYMLVMQNRKYAGVISHTVGARKRKAIARKAMELDVRLANGNAKL 128
>UniRef50_Q7R1L8 Cluster: GLP_28_64726_64316; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_28_64726_64316 - Giardia lamblia
ATCC 50803
Length = 136
Score = 84.2 bits (199), Expect = 1e-15
Identities = 37/70 (52%), Positives = 53/70 (75%)
Frame = +2
Query: 44 IRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSN 223
I P+ I+KKR +FIR QS+R+ ++K +WRKPRGID+ +R +++GQ M +IGYGS+
Sbjct: 6 IHPLPHKIIIKKRKNKFIRFQSERFVRVKPSWRKPRGIDSPMRHQYRGQRPMVSIGYGSD 65
Query: 224 KKTRHMLPNG 253
K+TR MLP G
Sbjct: 66 KETRFMLPCG 75
Score = 59.7 bits (138), Expect = 3e-08
Identities = 26/55 (47%), Positives = 40/55 (72%)
Frame = +1
Query: 268 VHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQE 432
+ V EL+ L M N+ + A+IAHGVS++ RK I+E A+++ +RV NA A+LR +E
Sbjct: 81 ISTVHELKTLFMNNKTHAAQIAHGVSARSRKQILEEAKKMGVRVLNADAKLRKEE 135
>UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L32 - Macaca mulatta
Length = 199
Score = 81.8 bits (193), Expect = 7e-15
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P ++K LVHN+KELE+L+ N+ YCA+IA+ VSSK K IVERA QL+IRVT+ ARL
Sbjct: 135 PSSLQKFLVHNIKELEVLLKCNKSYCAKIAYNVSSKNHKAIVERAAQLAIRVTSHNARLC 194
Query: 424 SQENE 438
S+EN+
Sbjct: 195 SKENK 199
Score = 60.9 bits (141), Expect = 1e-08
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +2
Query: 149 RGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 250
RGIDNR+ RRFK Q+LM NIGYGSNKK +H LP+
Sbjct: 103 RGIDNRIHRRFKSQFLMSNIGYGSNKKIKHTLPS 136
>UniRef50_A0DPG3 Cluster: Chromosome undetermined scaffold_59, whole
genome shotgun sequence; n=10; Eukaryota|Rep: Chromosome
undetermined scaffold_59, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 136
Score = 81.0 bits (191), Expect = 1e-14
Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MAIRPVYRPTIVKKRTKRFIRHQSDRYD-KLKRNWRKPRGIDNRVRRRFKGQYLMPNIGY 214
M ++ + IV KRTKRF+R +S+ Y KL+ +WR+PRGIDNRVRRRF+G MP G+
Sbjct: 1 MVVKALAHKRIVHKRTKRFVRFESEDYPHKLRPSWRRPRGIDNRVRRRFRGNRPMPKAGH 60
Query: 215 GSNKKTRHMLPNG 253
+KKTR++ +G
Sbjct: 61 RGDKKTRYLDQSG 73
Score = 63.7 bits (148), Expect = 2e-09
Identities = 25/61 (40%), Positives = 45/61 (73%)
Frame = +1
Query: 256 RKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQEN 435
RK+L+ N K+LE+L+ NR + E+AH +S++KR +V RA +L++R+TN ++R++E
Sbjct: 75 RKLLITNEKDLELLLTNNRTFAGELAHNLSARKRATLVRRAAELNVRLTNGKGKVRAEEK 134
Query: 436 E 438
+
Sbjct: 135 K 135
>UniRef50_Q8SS18 Cluster: 60S ribosomal protein L32; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L32
- Encephalitozoon cuniculi
Length = 139
Score = 80.2 bits (189), Expect = 2e-14
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +2
Query: 77 KRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 253
++ K+FIRH SDRY ++K +WR+P GID++VR+R KG+ MP+I Y K+ RH+LPNG
Sbjct: 19 RKNKKFIRHHSDRYKRVKPSWRRPHGIDSKVRKRCKGEREMPSIKYKKPKEIRHLLPNG 77
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARL 420
P +RKV + N+ +L L NR YC EIAH V ++KR IV RA++L I + N ARL
Sbjct: 75 PNGLRKVRIFNINDLTPLTSLNRFYCGEIAHAVGARKRIAIVNRAKELGICLLNGNARL 133
>UniRef50_Q9SEV3 Cluster: 60S ribosomal protein L32; n=1; Guillardia
theta|Rep: 60S ribosomal protein L32 - Guillardia theta
(Cryptomonas phi)
Length = 119
Score = 77.4 bits (182), Expect = 1e-13
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +2
Query: 71 VKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 250
+ K K F RH++ +Y ++ WRKP+GID+ VRRRFKG+ MPNIGYGS+KK+R++
Sbjct: 4 LNKTKKNFKRHEAKKYKRINAGWRKPKGIDSCVRRRFKGKTKMPNIGYGSSKKSRYLGKT 63
Query: 251 G 253
G
Sbjct: 64 G 64
Score = 36.3 bits (80), Expect = 0.32
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 268 VHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 405
V + KEL+ L+M N Y EI+ + +K+K I+E+A ++VTN
Sbjct: 70 VKSPKELDFLIMSNLFYDIEISKKLGKEKKKKIIEKAIIYDMKVTN 115
>UniRef50_Q9XFE3 Cluster: 60S ribosomal protein; n=1; Oryza
sativa|Rep: 60S ribosomal protein - Oryza sativa (Rice)
Length = 114
Score = 72.5 bits (170), Expect = 4e-12
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = +2
Query: 35 KMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPN 205
KMA+ P+ IVKKR K+F R SDRY LK +WR+P+GID+RVRR+FKG LMPN
Sbjct: 10 KMAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPN 65
>UniRef50_UPI00005A3317 Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=2; Canis lupus familiaris|Rep: PREDICTED:
similar to 60S ribosomal protein L32 - Canis familiaris
Length = 218
Score = 71.7 bits (168), Expect = 7e-12
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 220
A+RP+ +P I K + R K+K NWR+PRGID+RV FKG LMPNI Y S
Sbjct: 85 ALRPLGKPKIFKMGPRSSSGTSQIRCVKMKHNWREPRGIDDRVCGSFKGPILMPNIDYMS 144
Query: 221 NKKTRHMLPNG 253
++KT+ MLP+G
Sbjct: 145 HEKTKPMLPSG 155
Score = 69.3 bits (162), Expect = 4e-11
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRK-YCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARL 420
P +K+L HN KEL++L+M N K +CAEIAH V SK + RA QL+I VTN A L
Sbjct: 153 PSGFQKLLTHNGKELKVLLMCNNKSHCAEIAHNVFSKNCRTSAGRAAQLAIEVTNPNASL 212
Query: 421 RSQENE 438
RS+ENE
Sbjct: 213 RSEENE 218
>UniRef50_Q1RQD0 Cluster: Ribosomal protein L32; n=1; Nyctotherus
ovalis|Rep: Ribosomal protein L32 - Nyctotherus ovalis
Length = 105
Score = 62.9 bits (146), Expect = 3e-09
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +2
Query: 125 LKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 253
+K +WRKP GIDNRVRR+ G MP GYGSN++TR ML NG
Sbjct: 1 MKTSWRKPGGIDNRVRRKCGGTIRMPGAGYGSNRQTRFMLANG 43
Score = 37.1 bits (82), Expect = 0.19
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +1
Query: 253 IRKVLVHNVKELEILMMQNRKYCAEIAHGVSSK 351
++K ++ K+LE+L+M NR++ EIAH +S+K
Sbjct: 44 LKKFVITCAKDLELLLMHNREFMGEIAHNLSAK 76
>UniRef50_UPI00015537AF Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 125
Score = 60.9 bits (141), Expect = 1e-08
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 220
A++P+ +P I +KR+K+ HQSD ++K W++PR I V KG+ LM IGYG
Sbjct: 3 ALQPLVKPKISRKRSKKCTWHQSDGCVRMKPAWQEPRSISTWVWGGLKGKVLMLRIGYG- 61
Query: 221 NKKTRHMLP 247
NK T+ MLP
Sbjct: 62 NKMTKLMLP 70
Score = 37.9 bits (84), Expect = 0.11
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 328 IAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQEN 435
I+ +SSK + IVERA L+IRVT+A ARL ++N
Sbjct: 72 ISFSLSSKNLEAIVERAAWLAIRVTDANARLHGEDN 107
>UniRef50_A2F2J1 Cluster: Ribosomal protein L32, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L32,
putative - Trichomonas vaginalis G3
Length = 150
Score = 60.5 bits (140), Expect = 2e-08
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +2
Query: 137 WRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGSV 259
WR PRGID+R RR+++G L P+ G+GS+K+TR MLPNG +
Sbjct: 51 WRHPRGIDSRFRRKYRGTPLHPSAGFGSDKETRFMLPNGFI 91
>UniRef50_Q3LWI6 Cluster: Ribosomal protein L32; n=1; Bigelowiella
natans|Rep: Ribosomal protein L32 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 106
Score = 59.7 bits (138), Expect = 3e-08
Identities = 24/56 (42%), Positives = 37/56 (66%)
Frame = +2
Query: 86 KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 253
K F++H S ++K+ WRKP GID+++R+R KG P IGYGS+K+ + + G
Sbjct: 3 KSFLKHNSKSLIRIKKKWRKPIGIDSKIRKRTKGAPKTPKIGYGSSKRIKSLNATG 58
>UniRef50_O26128 Cluster: 50S ribosomal protein L32e; n=3;
Methanobacteriaceae|Rep: 50S ribosomal protein L32e -
Methanobacterium thermoautotrophicum
Length = 108
Score = 52.4 bits (120), Expect = 5e-06
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +2
Query: 86 KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 253
K+F R + RY KL WR+PRG +++RR KG+ MP IGY + R + P+G
Sbjct: 3 KKFKRQEYARYKKLGEKWRRPRGRTSKMRRYEKGKPAMPAIGYRKPSEVRGLHPSG 58
>UniRef50_A0RUF7 Cluster: Ribosomal protein L32E; n=2;
Thermoprotei|Rep: Ribosomal protein L32E - Cenarchaeum
symbiosum
Length = 134
Score = 51.6 bits (118), Expect = 8e-06
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 71 VKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRR-RFKGQYLMPNIGYGSNKKTRHMLP 247
V K F+R +S RY ++K WRKP+G+DN R+ + +G+ + +GYG + R + P
Sbjct: 14 VAKHRPDFVRAESWRYKRIKPAWRKPKGVDNHQRKQKSRGRPGLVKVGYGGPRAARGLHP 73
Query: 248 NG 253
+G
Sbjct: 74 SG 75
>UniRef50_Q9YF92 Cluster: 50S ribosomal protein L32e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L32e -
Aeropyrum pernix
Length = 145
Score = 51.6 bits (118), Expect = 8e-06
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 59 RPTIVKKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKT 232
R I K RF+R+ S R+ K +R WRKP+G DN++R + KG + +GY + K
Sbjct: 30 RRLIASKSRHRFLRYLSWRFWKFERRDYWRKPKGNDNKMRLQLKGYPPIVKVGYRTPKAI 89
Query: 233 RHMLPNG 253
R M P+G
Sbjct: 90 RGMHPSG 96
>UniRef50_Q96BP1 Cluster: RPL32P3 protein; n=2; Catarrhini|Rep:
RPL32P3 protein - Homo sapiens (Human)
Length = 82
Score = 49.2 bits (112), Expect = 4e-05
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 130
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>UniRef50_Q975J7 Cluster: 50S ribosomal protein L32e; n=3;
Sulfolobus|Rep: 50S ribosomal protein L32e - Sulfolobus
tokodaii
Length = 131
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +2
Query: 71 VKKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHML 244
++++ +F+R+ D++ ++ R WRKP+GIDN VR KG IG+ S ++ R +
Sbjct: 17 IREKKIKFLRYDWDKFYRIGRQETWRKPKGIDNPVRLELKGYQPKVKIGFRSPREIRGLH 76
Query: 245 PNGSV 259
P+G +
Sbjct: 77 PSGLI 81
>UniRef50_UPI00015BB237 Cluster: LSU ribosomal protein L32E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L32E - Ignicoccus hospitalis KIN4/I
Length = 148
Score = 48.8 bits (111), Expect = 6e-05
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 405
P + V+VHNVKELE + K+ IA V KKR I+ RAQ+L +RV N
Sbjct: 92 PSGLEPVIVHNVKELE--KVDKEKHIVYIASSVGKKKRAEIIRRAQELGVRVAN 143
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +2
Query: 92 FIRHQSDRYDKLKRN--WRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 253
FIR+ RY +L+R WRKP+G DN+ R + KG + +GY + K+ R + P+G
Sbjct: 39 FIRYHWWRYFRLERGYKWRKPKGNDNKSRLQLKGYPPIVKVGYRTPKEVRGLHPSG 94
>UniRef50_Q1VH30 Cluster: 50S ribosomal protein L32e; n=3; cellular
organisms|Rep: 50S ribosomal protein L32e -
Psychroflexus torquis ATCC 700755
Length = 238
Score = 48.8 bits (111), Expect = 6e-05
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 KKRTKRFIRHQSDRYDKLKRN-WRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 250
KK+T F R + RY +L R+ WR P G+DN+ RR +K + + IG+G R + P+
Sbjct: 124 KKKTPSFRRTEWFRYKRLSRSGWRAPHGMDNKQRRNYKYRGSLVRIGHGKVAAARFLHPS 183
Query: 251 G 253
G
Sbjct: 184 G 184
Score = 37.5 bits (83), Expect = 0.14
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 405
P R+++VHN+ +LE + + A + V +KR+ I RA +L +RV N
Sbjct: 182 PSGFREIMVHNIDDLETIDPETE--AARVGATVGGRKREHIYARADELGVRVLN 233
>UniRef50_Q9UX90 Cluster: 50S ribosomal protein L32e; n=2;
Sulfolobaceae|Rep: 50S ribosomal protein L32e -
Sulfolobus solfataricus
Length = 138
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 VKKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHML 244
+K + +F+R+ SD++ +L R WR+P G DN+ R + +G + ++GY KK R
Sbjct: 20 LKAKKPKFLRYDSDKFYRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKKVRGFH 79
Query: 245 PNG 253
P+G
Sbjct: 80 PSG 82
Score = 42.3 bits (95), Expect = 0.005
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 214 RFQQEDPSYAPKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSI 393
R ++ + P +R+V+VHNV EL + Q I+ V KKR I+ +A++L +
Sbjct: 70 RLPKKVRGFHPSGLRQVIVHNVNELVKVQNQKDNVIVTISSSVGFKKRLEILNKARELGL 129
Query: 394 RVTN 405
+V+N
Sbjct: 130 KVSN 133
>UniRef50_Q8ZVV9 Cluster: 50S ribosomal protein L32e; n=5;
Archaea|Rep: 50S ribosomal protein L32e - Pyrobaculum
aerophilum
Length = 152
Score = 45.6 bits (103), Expect = 5e-04
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +2
Query: 68 IVKKRTKRFIRHQSDRYDKLKRN-WRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHML 244
++K++ F+R RY +++ + WR R IDN++RR++KG +GY R +
Sbjct: 21 LLKRKKPEFVRIDQWRYKRIEDSGWRNTRSIDNKIRRKWKGWPKPVEVGYRKPAAVRGLH 80
Query: 245 PNGSV 259
P+G V
Sbjct: 81 PSGFV 85
Score = 33.9 bits (74), Expect = 1.7
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARL 420
P +VLVHNV+EL + + + I V +KR IV+RA+++ V N R+
Sbjct: 81 PSGFVEVLVHNVEEL--AKLDPKTHAIRIGRTVGLRKRIEIVKRAREMGFYVLNPGKRV 137
>UniRef50_P54010 Cluster: 50S ribosomal protein L32e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L32e -
Methanococcus jannaschii
Length = 146
Score = 45.6 bits (103), Expect = 5e-04
Identities = 20/61 (32%), Positives = 37/61 (60%)
Frame = +2
Query: 71 VKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 250
+K + FIR ++ R+ +L WR+P+G +++R ++K + + IGY S K R + P+
Sbjct: 11 LKMKKPDFIRQEAHRHKRLGEKWRRPKGRHSKMRLKWKEKPPVVEIGYRSPKAVRGLHPS 70
Query: 251 G 253
G
Sbjct: 71 G 71
Score = 37.9 bits (84), Expect = 0.11
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 405
P + VLV+NVK+LE L + + A IA V +K+ I+ RA++L IR+ N
Sbjct: 69 PSGLEDVLVYNVKDLEKLNPETQG--ARIASTVGKRKKIEIIIRARELGIRILN 120
>UniRef50_Q8TRT0 Cluster: 50S ribosomal protein L32e; n=6;
Methanosarcinaceae|Rep: 50S ribosomal protein L32e -
Methanosarcina acetivorans
Length = 129
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +2
Query: 68 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 247
+ K + +F R S ++ +L NWR+PRG + RR++ + + +GYGS + + P
Sbjct: 14 VQKGKKPQFKRTCSHKFKRLDDNWRRPRGSQGKQRRKYVSKGALVQVGYGSPAAVKGLHP 73
Query: 248 NG 253
+G
Sbjct: 74 SG 75
>UniRef50_O28371 Cluster: 50S ribosomal protein L32e; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L32e -
Archaeoglobus fulgidus
Length = 129
Score = 45.6 bits (103), Expect = 5e-04
Identities = 22/64 (34%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Frame = +2
Query: 74 KKRTKRFIRHQSDRYDKLK-RNWRKPRGIDNRVRRRFKGQY---LMPNIGYGSNKKTRHM 241
K R F R+ ++ +L+ ++WR+PRG+ N++R+R+ G++ + N+G+GS K R +
Sbjct: 14 KARKPEFRRYCWNKKLRLRNKSWRRPRGLFNKLRKRYGGKWSGRIPVNVGFGSPKAVRGL 73
Query: 242 LPNG 253
P+G
Sbjct: 74 HPSG 77
>UniRef50_A3H8Q6 Cluster: Ribosomal protein L32e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L32e -
Caldivirga maquilingensis IC-167
Length = 197
Score = 44.4 bits (100), Expect = 0.001
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Frame = +2
Query: 71 VKKRTKR--FIRHQSDRYD-KLKRN-WRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRH 238
++ R +R FIR+ + + +L+ + WR+P+GIDN++R + KG M N+GY + R
Sbjct: 71 IRMRRERYGFIRYYNKEHKIRLEDSPWRRPKGIDNKIRMKRKGYPPMVNVGYRGPRGVRG 130
Query: 239 MLPNGSV 259
+ P+G +
Sbjct: 131 IHPSGFI 137
>UniRef50_A2SPL9 Cluster: Ribosomal protein L32e; n=2;
Methanomicrobiales|Rep: Ribosomal protein L32e -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 144
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 77 KRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 253
K++ RF R KL +WR+PRG+ ++ R+ ++ + P G+G+ K R P+G
Sbjct: 15 KKSSRFARQCLQAKVKLADSWRRPRGLHSKQRKDYRAKGAHPEAGFGAPKAVRGFHPSG 73
>UniRef50_A3DNC4 Cluster: Ribosomal protein L32e; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L32e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 136
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 VKKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHML 244
+K + F+RH + K + + WRKP+G DN++R + KG + +GY K R +
Sbjct: 17 LKSKKPEFLRHLWWKKPKFRNDPKWRKPKGTDNKMRLKKKGYPPLVEVGYRGPKLVRGLH 76
Query: 245 PNG 253
P+G
Sbjct: 77 PSG 79
>UniRef50_Q2FSG6 Cluster: Ribosomal protein L32e; n=1;
Methanospirillum hungatei JF-1|Rep: Ribosomal protein
L32e - Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 149
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 74 KKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 253
K + RF R D+ + +WR+PRG+ ++ R++ K + P GYGS R M P G
Sbjct: 13 KSKDARFKREGVDKKKTISDSWRRPRGLHSKQRKQRKAKGPHPTPGYGSPLAVRGMHPCG 72
>UniRef50_A7I5Q6 Cluster: Ribosomal protein L32e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein L32e -
Methanoregula boonei (strain 6A8)
Length = 246
Score = 42.7 bits (96), Expect = 0.004
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +2
Query: 68 IVKKRTKR---FIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRH 238
+++ RT++ F RH +L +WRKPRG N+ R + K + +P G+GS R
Sbjct: 8 LIRVRTEKGAVFKRHGFGTKPQLSDSWRKPRGQHNKQREQKKAKGNLPKPGFGSPIAVRG 67
Query: 239 MLPNG 253
M P+G
Sbjct: 68 MHPSG 72
>UniRef50_Q74MV8 Cluster: 50S ribosomal protein L32e; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L32e -
Nanoarchaeum equitans
Length = 135
Score = 41.5 bits (93), Expect = 0.009
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 VKKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHML 244
+K++ F+R R + + WR G DN+ R + KG+ P GY S +K R +L
Sbjct: 22 LKRKKPEFLRTNWYRKKAFRNDPKWRWGHGRDNKFRLKMKGKPRPPEPGYRSPRKVRGLL 81
Query: 245 PNG 253
PNG
Sbjct: 82 PNG 84
Score = 39.5 bits (88), Expect = 0.035
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 405
P ++ V++HNV+EL + A I H V +KR+ I+E+A++LSI + N
Sbjct: 82 PNGLKPVIIHNVEELTKI---KEGEIAVIHHAVGKRKRQQILEKAKELSIPIAN 132
>UniRef50_A2VEI8 Cluster: IP17707p; n=1; Drosophila
melanogaster|Rep: IP17707p - Drosophila melanogaster
(Fruit fly)
Length = 126
Score = 39.9 bits (89), Expect = 0.026
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 154 Y*QQSPQAIQGSILDAQHRLRFQQEDPSYAPKWIRKV 264
Y QQS +QG++ DAQHRLR +Q P +A I++V
Sbjct: 7 YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEV 43
Score = 39.5 bits (88), Expect = 0.035
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +3
Query: 264 PSSQC*RAGNLDDAKQEVLRRDRSRCLFEEAEADRGKSPAAQHQSNECGRSPPVPGERIN 443
P +Q RAG A+ +LRRDR R L +EA+ D AA ++ RSP ER++
Sbjct: 44 PGAQRARAGGPAHAEPRLLRRDRPRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRERVS 103
Query: 444 I 446
+
Sbjct: 104 L 104
>UniRef50_Q0W1X1 Cluster: Putative 50S ribosomal protein L32E; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative 50S
ribosomal protein L32E - Uncultured methanogenic
archaeon RC-I
Length = 221
Score = 38.3 bits (85), Expect = 0.080
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 92 FIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 253
F R S + KL +WR+PRG ++ RR K + IGYGS + P+G
Sbjct: 111 FNRIDSHKKIKLSASWRRPRGHHSQFRRGKKAKGAKVKIGYGSPAEVNGFHPSG 164
>UniRef50_Q6L1B0 Cluster: 50S ribosomal protein L32e; n=5;
Euryarchaeota|Rep: 50S ribosomal protein L32e -
Picrophilus torridus
Length = 134
Score = 37.5 bits (83), Expect = 0.14
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 74 KKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 253
+KR + F R + RY K +WRKPRG +++R + + + GY S R + P+G
Sbjct: 23 RKRVE-FRRQEWFRYKKFNESWRKPRGKHSKLREHLGYRPPVVDAGYRSPAAVRGLHPSG 81
>UniRef50_A1RWR9 Cluster: Ribosomal protein L32e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L32e - Thermofilum
pendens (strain Hrk 5)
Length = 159
Score = 36.7 bits (81), Expect = 0.24
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 IVKKRTKRFIRHQSDRYDKLKRNWRKPRG-IDNRVRRRFKGQYLMPNIGYGSNKKTRHML 244
++ + F R ++ +L+ WR PR +DN++R + KG M +GY + R +
Sbjct: 45 LISRHRPHFTRMNIWQFKRLEDVWRSPRHFLDNKIRLQRKGFPPMVKVGYRGPRAVRGLH 104
Query: 245 PNG 253
P+G
Sbjct: 105 PSG 107
>UniRef50_A4RVQ1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 51
Score = 35.1 bits (77), Expect = 0.75
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 44 IRPVYRPTIVKKRTKRFIRHQSDRYDKL 127
+ P+ + IVKKRTK F ++QSDRY ++
Sbjct: 2 VTPLIKHKIVKKRTKTFKKYQSDRYKRI 29
>UniRef50_Q01E89 Cluster: Chromosome 02 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 02 contig 1, DNA
sequence - Ostreococcus tauri
Length = 182
Score = 34.3 bits (75), Expect = 1.3
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = -1
Query: 387 ELLGSFHDQLPLLRRDTVSDLCAVLPVLHHQDFQLFNIVN*DLTD 253
ELL S +D L + R V DL AVL V+H ++ ++ ++V+ +L +
Sbjct: 56 ELLRSLNDGLAVKRGHVVRDLGAVLAVVHEEEVKVLHVVDSELQE 100
>UniRef50_Q2W4D7 Cluster: Lipid-A-disaccharide synthase; n=4;
Rhodospirillaceae|Rep: Lipid-A-disaccharide synthase -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 390
Score = 33.5 bits (73), Expect = 2.3
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 178 SPADSVVNTSRFTPIPLKFVIAIRLMPDKSLRP--LFDDCRP 59
SP + + T RF + LKFV + ++ D+++ P L DDCRP
Sbjct: 291 SPVSAFIAT-RFLGLSLKFVTLVNILVDEAVMPELLQDDCRP 331
>UniRef50_Q45W16 Cluster: ATP-binding cassette, sub-family G, member
4; n=1; Toxoplasma gondii|Rep: ATP-binding cassette,
sub-family G, member 4 - Toxoplasma gondii
Length = 992
Score = 33.1 bits (72), Expect = 3.0
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 264 PSSQC*RAGNLDDAKQEVLRRDRSRCLFEEAEADRGKSPAAQHQSNECGRSPP 422
P+S C A +D + E R SR EE+E D G+S + + GR P
Sbjct: 212 PASACRPASEMDASSSEATRMRSSRLAAEESEKDSGRS-GREAAEGDAGRGHP 263
>UniRef50_Q6PB51 Cluster: Coiled-coil domain-containing protein 117;
n=8; Amniota|Rep: Coiled-coil domain-containing protein
117 - Mus musculus (Mouse)
Length = 277
Score = 33.1 bits (72), Expect = 3.0
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 186 VNT*CPTSVTVPTRRPVICSQMDP*GPSSQC*RA-GNLDDAKQEVLRRDRSRCLFEEAEA 362
VNT CP+S+++P+ V+C +MD QC A L + + ++ D EE E+
Sbjct: 111 VNT-CPSSLSMPSMLDVVCEEMDQTTGEPQCEVARRRLQEIEDRIIDED------EEVES 163
Query: 363 DRGKS 377
DR S
Sbjct: 164 DRNVS 168
>UniRef50_P12736 Cluster: 50S ribosomal protein L32e; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L32e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 241
Score = 32.7 bits (71), Expect = 4.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 89 RFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 253
+F R + ++ +WRKPRG ++ RR KG+ G+ S R P+G
Sbjct: 128 QFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSG 182
Score = 32.7 bits (71), Expect = 4.0
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 405
P +V VHNV +LE + IA V ++KR+ I E A+ IRV N
Sbjct: 180 PSGFEEVRVHNVDDLE--GVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLN 231
>UniRef50_UPI000155C280 Cluster: PREDICTED: similar to DNA binding
protein, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to DNA binding protein, partial -
Ornithorhynchus anatinus
Length = 636
Score = 31.9 bits (69), Expect = 7.0
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = +2
Query: 17 FLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYL 196
FLKE + IR P V + + H R LK WR R D V RR K Q
Sbjct: 88 FLKEAWTEEIREEQLPDTVFAESHGNVSHLPRRGRSLKNQWRSRRKRDRPVERR-KAQKP 146
Query: 197 MP 202
+P
Sbjct: 147 VP 148
>UniRef50_Q3JR04 Cluster: Putative uncharacterized protein; n=2;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 1082
Score = 31.9 bits (69), Expect = 7.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRR 178
A+ P PTI + T+R R R + RN R+ RG RVR R
Sbjct: 406 AVAPAVAPTIARDPTRRLARRIRRRRLRSSRN-RRDRGFSGRVRGR 450
>UniRef50_A3ZQV8 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 235
Score = 31.9 bits (69), Expect = 7.0
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 337 RERSLRSTSCFASSRFPAL*HCELGPYGSIWEHMTGLLVGTVTDVGHQVL 188
R RS STS FA R P++ CEL + + VTD+G+ +L
Sbjct: 24 RGRSFGSTSYFAMRRLPSILQCEL--WNAAQAQPPQATTAVVTDIGNDIL 71
>UniRef50_A0DX60 Cluster: Chromosome undetermined scaffold_68, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_68, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2716
Score = 31.9 bits (69), Expect = 7.0
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 163 QSPQAIQGSILDAQHRLRFQQEDPSYAPKWIRKVLVH-NVKELEILMMQ---NRKYCAEI 330
Q P I ++L H+L Q++ Y+PK+ K L ++EL ++++ N +Y +EI
Sbjct: 2165 QIPMQIISTLLQQNHQLTLQEKKLLYSPKFYDKALKSAKIEELTPIILKFAYNNRYFSEI 2224
Query: 331 AHG 339
G
Sbjct: 2225 ITG 2227
>UniRef50_A1HRM4 Cluster: Putative uncharacterized protein; n=1;
Thermosinus carboxydivorans Nor1|Rep: Putative
uncharacterized protein - Thermosinus carboxydivorans
Nor1
Length = 83
Score = 31.5 bits (68), Expect = 9.2
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -3
Query: 268 LGP-YGSIWEHMTGLLVGTVTDVGHQVLTLESPADSVVNTSRFTPIPLKFVIAIRLMPDK 92
LGP GS W+HM +++G + VG ++ + V N F P+ +I +R M DK
Sbjct: 21 LGPSLGSNWKHMILMIMGCLAPVGVALMLTQVGYTGVGNYLLFLLCPIVHMIMMRNM-DK 79
Query: 91 S 89
S
Sbjct: 80 S 80
>UniRef50_Q4XZG1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1258
Score = 31.5 bits (68), Expect = 9.2
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +1
Query: 229 DPSYAPKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNA 408
+ Y +W K+L+H K L+ L+ + K C + + VS K I R LS RV N
Sbjct: 570 EKDYIEEWEEKILIHGNKNLDFLIPEFEKICDK--YNVSIKIASDIF-RIYLLSKRVKNK 626
Query: 409 AARLRSQENE 438
R +E
Sbjct: 627 IGRKTISHDE 636
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,604,192
Number of Sequences: 1657284
Number of extensions: 8775452
Number of successful extensions: 28362
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 27621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28349
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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