Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00255
(462 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 138 9e-33
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 138 9e-33
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 138 9e-33
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 138 9e-33
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 80 4e-15
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 2e-06
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 7e-06
U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein. 31 1.9
BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1... 31 1.9
BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein. 31 1.9
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 138 bits (334), Expect = 9e-33
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 220
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 221 NKKTRHMLPNG 253
NKKT+HMLP+G
Sbjct: 63 NKKTKHMLPSG 73
Score = 99.5 bits (237), Expect = 5e-21
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P RK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 424 SQENE 438
S+ENE
Sbjct: 131 SEENE 135
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 138 bits (334), Expect = 9e-33
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 220
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 221 NKKTRHMLPNG 253
NKKT+HMLP+G
Sbjct: 63 NKKTKHMLPSG 73
Score = 99.5 bits (237), Expect = 5e-21
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P RK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 424 SQENE 438
S+ENE
Sbjct: 131 SEENE 135
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 138 bits (334), Expect = 9e-33
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 220
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 221 NKKTRHMLPNG 253
NKKT+HMLP+G
Sbjct: 63 NKKTKHMLPSG 73
Score = 99.5 bits (237), Expect = 5e-21
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P RK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 424 SQENE 438
S+ENE
Sbjct: 131 SEENE 135
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 138 bits (334), Expect = 9e-33
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 220
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 221 NKKTRHMLPNG 253
NKKT+HMLP+G
Sbjct: 63 NKKTKHMLPSG 73
Score = 99.5 bits (237), Expect = 5e-21
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P RK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 424 SQENE 438
S+ENE
Sbjct: 131 SEENE 135
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 79.8 bits (188), Expect = 4e-15
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P K LVHNVKELE+L++ N+ YC EI H VSSK K I+ERA Q+ IRVTNA A L
Sbjct: 43 PSGFWKFLVHNVKELEVLLVSNKSYCVEITHDVSSKNCKAILERAAQVVIRVTNANASLH 102
Query: 424 SQENE 438
S E+E
Sbjct: 103 SAESE 107
Score = 40.3 bits (90), Expect = 0.003
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 197 MPNIGYGSNKKTRHMLPNG 253
MPNIGYG NKKT+H+LP+G
Sbjct: 27 MPNIGYGRNKKTKHILPSG 45
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 2e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 133
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 7e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 130
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein.
Length = 715
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 128 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 250
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1
protein.
Length = 715
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 128 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 250
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein.
Length = 263
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 128 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 250
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 130 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,531,730
Number of Sequences: 237096
Number of extensions: 1308767
Number of successful extensions: 3518
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3518
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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