Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00255
(462 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p pro... 142 2e-34
AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC... 142 2e-34
Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal prot... 139 2e-33
U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal prot... 139 2e-33
AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p pro... 139 2e-33
AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB... 139 2e-33
AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA... 139 2e-33
X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal prot... 135 2e-32
BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p pro... 40 0.002
AE014297-100|ABI31129.1| 299|Drosophila melanogaster CG41463-PA... 28 5.3
AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA... 28 7.0
AE014296-1525|AAF50362.1| 438|Drosophila melanogaster CG13307-P... 28 7.0
AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p pro... 27 9.3
AY069273-1|AAL39418.1| 421|Drosophila melanogaster GM10003p pro... 27 9.3
AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 ... 27 9.3
AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,... 27 9.3
AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,... 27 9.3
>BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p
protein.
Length = 147
Score = 142 bits (344), Expect = 2e-34
Identities = 62/74 (83%), Positives = 65/74 (87%)
Frame = +2
Query: 32 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 211
+KM IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12 FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71
Query: 212 YGSNKKTRHMLPNG 253
YGSNK+TRHMLP G
Sbjct: 72 YGSNKRTRHMLPTG 85
Score = 102 bits (244), Expect = 3e-22
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P +K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 83 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 142
Query: 424 SQENE 438
SQENE
Sbjct: 143 SQENE 147
>AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC,
isoform C protein.
Length = 147
Score = 142 bits (344), Expect = 2e-34
Identities = 62/74 (83%), Positives = 65/74 (87%)
Frame = +2
Query: 32 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 211
+KM IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12 FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71
Query: 212 YGSNKKTRHMLPNG 253
YGSNK+TRHMLP G
Sbjct: 72 YGSNKRTRHMLPTG 85
Score = 102 bits (244), Expect = 3e-22
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P +K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 83 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 142
Query: 424 SQENE 438
SQENE
Sbjct: 143 SQENE 147
>Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 139 bits (336), Expect = 2e-33
Identities = 61/72 (84%), Positives = 63/72 (87%)
Frame = +2
Query: 38 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 217
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 218 SNKKTRHMLPNG 253
SNK+TRHMLP G
Sbjct: 61 SNKRTRHMLPTG 72
Score = 102 bits (244), Expect = 3e-22
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P +K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129
Query: 424 SQENE 438
SQENE
Sbjct: 130 SQENE 134
>U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 139 bits (336), Expect = 2e-33
Identities = 61/72 (84%), Positives = 63/72 (87%)
Frame = +2
Query: 38 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 217
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 218 SNKKTRHMLPNG 253
SNK+TRHMLP G
Sbjct: 61 SNKRTRHMLPTG 72
Score = 102 bits (244), Expect = 3e-22
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P +K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129
Query: 424 SQENE 438
SQENE
Sbjct: 130 SQENE 134
>AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p
protein.
Length = 134
Score = 139 bits (336), Expect = 2e-33
Identities = 61/72 (84%), Positives = 63/72 (87%)
Frame = +2
Query: 38 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 217
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 218 SNKKTRHMLPNG 253
SNK+TRHMLP G
Sbjct: 61 SNKRTRHMLPTG 72
Score = 102 bits (244), Expect = 3e-22
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P +K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129
Query: 424 SQENE 438
SQENE
Sbjct: 130 SQENE 134
>AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB,
isoform B protein.
Length = 134
Score = 139 bits (336), Expect = 2e-33
Identities = 61/72 (84%), Positives = 63/72 (87%)
Frame = +2
Query: 38 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 217
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 218 SNKKTRHMLPNG 253
SNK+TRHMLP G
Sbjct: 61 SNKRTRHMLPTG 72
Score = 102 bits (244), Expect = 3e-22
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P +K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129
Query: 424 SQENE 438
SQENE
Sbjct: 130 SQENE 134
>AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA,
isoform A protein.
Length = 134
Score = 139 bits (336), Expect = 2e-33
Identities = 61/72 (84%), Positives = 63/72 (87%)
Frame = +2
Query: 38 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 217
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 218 SNKKTRHMLPNG 253
SNK+TRHMLP G
Sbjct: 61 SNKRTRHMLPTG 72
Score = 102 bits (244), Expect = 3e-22
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P +K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129
Query: 424 SQENE 438
SQENE
Sbjct: 130 SQENE 134
>X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal protein
49 protein.
Length = 133
Score = 135 bits (327), Expect = 2e-32
Identities = 60/72 (83%), Positives = 62/72 (86%)
Frame = +2
Query: 38 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 217
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRV RRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYG 60
Query: 218 SNKKTRHMLPNG 253
SNK+TRHMLP G
Sbjct: 61 SNKRTRHMLPTG 72
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 396
P +K LVHNV+ELE+L+MQN + E+ S + K I+ERA+QLS+R
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLR 119
>BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p
protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 154 Y*QQSPQAIQGSILDAQHRLRFQQEDPSYAPKWIRKV 264
Y QQS +QG++ DAQHRLR +Q P +A I++V
Sbjct: 7 YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEV 43
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +3
Query: 264 PSSQC*RAGNLDDAKQEVLRRDRSRCLFEEAEADRGKSPAAQHQSNECGRSPPVPGERIN 443
P +Q RAG A+ +LRRDR R L +EA+ D AA ++ RSP ER++
Sbjct: 44 PGAQRARAGGPAHAEPRLLRRDRPRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRERVS 103
Query: 444 I 446
+
Sbjct: 104 L 104
>AE014297-100|ABI31129.1| 299|Drosophila melanogaster CG41463-PA
protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 291 NLDDAKQEVLRRDRSRCL-FEEAEADRGKSPAAQHQS 398
NL ++ LRR RSRCL + R SP+ +H S
Sbjct: 132 NLSRSRSRTLRRSRSRCLGWSCWSLRRSPSPSRRHHS 168
>AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA
protein.
Length = 1561
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 162 TESAGDSRVNT*CPTSVTVPTRRPVICSQMDP 257
T+ AG ++ N PTS+ P+ P+I + +P
Sbjct: 1011 TQQAGHAQANGSSPTSIQAPSATPIIDCKSNP 1042
>AE014296-1525|AAF50362.1| 438|Drosophila melanogaster CG13307-PA
protein.
Length = 438
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 159 TTESAGDSRVNT*CPTSVTVPTRRPVICSQMDP*G 263
TTES+ DS V T PT+VT P +C+Q + G
Sbjct: 386 TTESSTDSTVTTETPTTVT-PLTPAQMCAQRNATG 419
>AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p
protein.
Length = 1019
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 29 TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 142
T +MA + +K+F+ +S +Y K+K+ WR
Sbjct: 841 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 878
>AY069273-1|AAL39418.1| 421|Drosophila melanogaster GM10003p
protein.
Length = 421
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 29 TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 142
T +MA + +K+F+ +S +Y K+K+ WR
Sbjct: 243 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 280
>AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3
protein.
Length = 2422
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 29 TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 142
T +MA + +K+F+ +S +Y K+K+ WR
Sbjct: 2244 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2281
>AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,
isoform D protein.
Length = 2431
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 29 TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 142
T +MA + +K+F+ +S +Y K+K+ WR
Sbjct: 2253 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2290
>AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,
isoform C protein.
Length = 2410
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 29 TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 142
T +MA + +K+F+ +S +Y K+K+ WR
Sbjct: 2232 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2269
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,389,518
Number of Sequences: 53049
Number of extensions: 416622
Number of successful extensions: 1360
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -