Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00255
(462 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 91 3e-19
AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 29 2.1
Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical p... 28 2.8
Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 27 4.9
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 27 4.9
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 27 4.9
U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical pr... 27 4.9
U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical pr... 27 4.9
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 27 4.9
Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical pr... 27 8.6
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 27 8.6
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 91.5 bits (217), Expect = 3e-19
Identities = 37/62 (59%), Positives = 51/62 (82%)
Frame = +2
Query: 68 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 247
+VKK+ +F RH+SDRY ++ +WRKP+GIDNRVRRRF+G MP IG+GS+++TR +LP
Sbjct: 11 VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTIGHGSDRRTRFVLP 70
Query: 248 NG 253
NG
Sbjct: 71 NG 72
Score = 82.6 bits (195), Expect = 1e-16
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = +1
Query: 244 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 423
P +KVLV NVK+L++L+MQ+ KY EI HGVS+K RK IVERA QL+I++TN ARLR
Sbjct: 70 PNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRKGIVERAAQLNIKLTNGNARLR 129
Query: 424 SQENE 438
++E+E
Sbjct: 130 TEESE 134
>AF100663-3|AAC68980.1| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein20 protein.
Length = 529
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = -3
Query: 325 LRSTSCFASSRFPAL*HCELGPYGSIWEHMTGLLVGTVTDVGHQVLTLESPADSVVNTS 149
L S CFASS + L + L +G G T+TD GH V L D + TS
Sbjct: 7 LFSAICFASS-YKILFYTNL--FGHSHVKFLGAAADTLTDAGHNVTVLIPVFDKALKTS 62
>Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical
protein C34C6.6b protein.
Length = 500
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 223 QEDPSYAPKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQ 384
Q+DP A W + L H E + L MQ + C +I G L V +A +
Sbjct: 244 QKDPQDARAWCKLGLAHAENEKDQLAMQAFQKCLQIDAGNKEALLGLSVSQANE 297
>Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical
protein C34C6.6a protein.
Length = 502
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 223 QEDPSYAPKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQ 384
Q+DP A W + L H E + L MQ + C +I G L V +A +
Sbjct: 246 QKDPQDARAWCKLGLAHAENEKDQLAMQAFQKCLQIDAGNKEALLGLSVSQANE 299
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
K07G5.3 protein.
Length = 1202
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 181 ESPADSVVN-TSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLVCFFKKRD 11
E P +S+ T R++ +P +++ +R+ ++ ++ FD+ R HLV + R+
Sbjct: 1058 EEPLESIQTATVRYSKLPEDWIVELRISLEREIKIRFDESRKHAIPQWHLVAARQLRE 1115
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 432 LLGPEASGRIRYSDAELLGSFHDQLPLLRRDTVSDLCAVL 313
LL P + G +R + LLG + D L + + D+C ++
Sbjct: 154 LLNPNSGGNLRVREHPLLGPYVDDLTKMAVCSYHDICNLM 193
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 432 LLGPEASGRIRYSDAELLGSFHDQLPLLRRDTVSDLCAVL 313
LL P + G +R + LLG + D L + + D+C ++
Sbjct: 154 LLNPNSGGNLRVREHPLLGPYVDDLTKMAVCSYHDICNLM 193
>U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical
protein C14F11.4a protein.
Length = 345
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 56 YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 229
Y P + KK +RFI ++R+D + RN P R + + Q L+ + Y S+ +
Sbjct: 4 YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60
Query: 230 TRHML 244
+ L
Sbjct: 61 AEYQL 65
>U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical
protein C14F11.4b protein.
Length = 341
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 56 YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 229
Y P + KK +RFI ++R+D + RN P R + + Q L+ + Y S+ +
Sbjct: 4 YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60
Query: 230 TRHML 244
+ L
Sbjct: 61 AEYQL 65
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 432 LLGPEASGRIRYSDAELLGSFHDQLPLLRRDTVSDLCAVL 313
LL P + G +R + LLG + D L + + D+C ++
Sbjct: 154 LLNPNSGGNLRVREHPLLGPYVDDLTKMAVCSYHDICNLM 193
>Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical
protein K04G2.10 protein.
Length = 319
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 34 QDGYKTCLQADNRQKEDEEIYQASIGSL*QT*EEL 138
QD K + D+RQKE E Y+ IGS+ + E++
Sbjct: 238 QDMVKYMEENDDRQKESIEKYKRKIGSMKKVIEKM 272
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 23 KETYKMAIRPVYRPTIVKKRTKR-FIRHQSDRYDKLKRNWRKPRGIDNRVRRR 178
K+ + A++P +R TI+ +R K ++ DRY K K+ + K + +RR
Sbjct: 387 KKKHMTALKP-WRDTILIERGKMPKLKKIRDRYIKQKKKFNKENRLSKECKRR 438
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,313,195
Number of Sequences: 27780
Number of extensions: 207111
Number of successful extensions: 663
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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