Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00253
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.0  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.3  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 489 LYKSLVQTNKDGTTNNRCKHLSKTHVQDKSRKQHRPTT 602
           L+K   + N++ TTN +   LS+       RK    +T
Sbjct: 327 LFKKKKRRNRESTTNTQSSSLSEFLTNTHKRKIENTST 364


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -3

Query: 547  CLHLLFVVPSLLVCTNDLYNTRRLHLTKVCRYHF 446
            C +  F    + +C N L N   L L   C Y F
Sbjct: 1111 CSNRCFFPSKIRICWNVLLNCVYLFLCGFCVYEF 1144


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +1

Query: 532 TTGASIYRKHTCKIRVVNNIVPPRYLAIKT 621
           TTG +  +    +++V  N  PP   + +T
Sbjct: 133 TTGVNFMKLDEIEVKVTGNDAPPPITSFET 162


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 550  YRKHTCKIRVVNNIVPPRYLAIKTLRCCLSSS 645
            YR H  K+  V + V P  +A+K+ +   SSS
Sbjct: 1069 YRHHLSKMHFVKDGVIPDPVALKSAQQGSSSS 1100


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 521 WDNEQQV 541
           WDNEQQV
Sbjct: 815 WDNEQQV 821


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 377 RSPKISIAMGSCPYLHDDKK 436
           +S +  +A G CP L+D +K
Sbjct: 834 KSAEQILAEGGCPNLYDARK 853


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,318
Number of Sequences: 336
Number of extensions: 3723
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)