Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00253
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 104 3e-22
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 100 5e-21
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 100 5e-21
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 100 5e-21
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 100 5e-21
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 100 5e-21
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 99 1e-20
U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein. 65 2e-10
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 104 bits (249), Expect = 3e-22
Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 KKMMPCLWWDWKGIIHYELLPPGRTVDSELYSEQLMILKQ*VKRKRPELINRRDVIFHHD 180
KK+M +WW G+IHY L PG T+ SE Y++Q+ + + ++R +P L+NR+ I HD
Sbjct: 188 KKVMVTVWWSAAGLIHYSFLNPGETITSEKYAQQIDEMHRKLQRLQPALVNRKGPILLHD 247
Query: 181 NARPHTSLAAQQKLREFGWEVLMHLRIVLTLHLQIST*CRSLQNF*VVSGIHH*R-LPNQ 357
NARPH + QKL E G+EVL H L + L NF H+ + N
Sbjct: 248 NARPHVAQPTLQKLNELGYEVLPHPPYSPDLSPTDYHFFKHLDNFLQGKRFHNQQDAENA 307
Query: 358 LPRYFDQKPQNFYSYGIMSLPTR*QKVIEQNGTY 459
+ + + +FY+ GI L +R QK ++ NG+Y
Sbjct: 308 FQEFVESRSTDFYATGINKLISRWQKCVDCNGSY 341
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 100 bits (239), Expect = 5e-21
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 KKMMPCLWWDWKGIIHYELLPPGRTVDSELYSEQLMILKQ*VKRKRPELINRRDVIFHHD 180
KK+M +WW G+IHY L PG T+ SE Y++++ + Q ++R + L+NR+ I HD
Sbjct: 516 KKVMVTIWWSAAGLIHYSFLNPGETITSEKYAQEIDEMNQKLQRLQLALVNRKGPILLHD 575
Query: 181 NARPHTSLAAQQKLREFGWEVLMHLRIVLTLHLQIST*CRSLQNF*VVSGIHH*R-LPNQ 357
NARPH + QKL E G+EVL H L + L NF H+ + N
Sbjct: 576 NARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENA 635
Query: 358 LPRYFDQKPQNFYSYGIMSLPTR*QKVIEQNGTY 459
+ + + +FY+ GI L +R QK ++ NG+Y
Sbjct: 636 FQEFVESQSTDFYATGINQLISRWQKCVDCNGSY 669
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 100 bits (239), Expect = 5e-21
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 KKMMPCLWWDWKGIIHYELLPPGRTVDSELYSEQLMILKQ*VKRKRPELINRRDVIFHHD 180
KK+M +WW G+IHY L PG T+ SE Y++++ + Q ++R + L+NR+ I HD
Sbjct: 189 KKVMVTIWWSAAGLIHYSFLNPGETITSEKYAQEIDEMNQKLQRLQLALVNRKGPILLHD 248
Query: 181 NARPHTSLAAQQKLREFGWEVLMHLRIVLTLHLQIST*CRSLQNF*VVSGIHH*R-LPNQ 357
NARPH + QKL E G+EVL H L + L NF H+ + N
Sbjct: 249 NARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENA 308
Query: 358 LPRYFDQKPQNFYSYGIMSLPTR*QKVIEQNGTY 459
+ + + +FY+ GI L +R QK ++ NG+Y
Sbjct: 309 FQEFVESQSTDFYATGINQLISRWQKCVDCNGSY 342
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 100 bits (239), Expect = 5e-21
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 KKMMPCLWWDWKGIIHYELLPPGRTVDSELYSEQLMILKQ*VKRKRPELINRRDVIFHHD 180
KK+M +WW G+IHY L PG T+ SE Y++++ + Q ++R + L+NR+ I HD
Sbjct: 274 KKVMVTIWWSAAGLIHYSFLNPGETITSEKYAQEIDEMNQKLQRLQLALVNRKGPILLHD 333
Query: 181 NARPHTSLAAQQKLREFGWEVLMHLRIVLTLHLQIST*CRSLQNF*VVSGIHH*R-LPNQ 357
NARPH + QKL E G+EVL H L + L NF H+ + N
Sbjct: 334 NARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENA 393
Query: 358 LPRYFDQKPQNFYSYGIMSLPTR*QKVIEQNGTY 459
+ + + +FY+ GI L +R QK ++ NG+Y
Sbjct: 394 FQEFVESQSTDFYATGINQLISRWQKCVDCNGSY 427
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 100 bits (239), Expect = 5e-21
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 KKMMPCLWWDWKGIIHYELLPPGRTVDSELYSEQLMILKQ*VKRKRPELINRRDVIFHHD 180
KK+M +WW G+IHY L PG T+ SE Y++++ + Q ++R + L+NR+ I HD
Sbjct: 516 KKVMVTIWWSAAGLIHYSFLNPGETITSEKYAQEIDEMNQKLQRLQLALVNRKGPILLHD 575
Query: 181 NARPHTSLAAQQKLREFGWEVLMHLRIVLTLHLQIST*CRSLQNF*VVSGIHH*R-LPNQ 357
NARPH + QKL E G+EVL H L + L NF H+ + N
Sbjct: 576 NARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENA 635
Query: 358 LPRYFDQKPQNFYSYGIMSLPTR*QKVIEQNGTY 459
+ + + +FY+ GI L +R QK ++ NG+Y
Sbjct: 636 FQEFVESQSTDFYATGINQLISRWQKCVDCNGSY 669
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 100 bits (239), Expect = 5e-21
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 KKMMPCLWWDWKGIIHYELLPPGRTVDSELYSEQLMILKQ*VKRKRPELINRRDVIFHHD 180
KK+M +WW G+IHY L PG T+ SE Y++++ + Q ++R + L+NR+ I HD
Sbjct: 516 KKVMVTIWWSAAGLIHYSFLNPGETITSEKYAQEIDEMNQKLQRLQLALVNRKGPILLHD 575
Query: 181 NARPHTSLAAQQKLREFGWEVLMHLRIVLTLHLQIST*CRSLQNF*VVSGIHH*R-LPNQ 357
NARPH + QKL E G+EVL H L + L NF H+ + N
Sbjct: 576 NARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENA 635
Query: 358 LPRYFDQKPQNFYSYGIMSLPTR*QKVIEQNGTY 459
+ + + +FY+ GI L +R QK ++ NG+Y
Sbjct: 636 FQEFVESQSTDFYATGINQLISRWQKCVDCNGSY 669
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 99.1 bits (236), Expect = 1e-20
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 KKMMPCLWWDWKGIIHYELLPPGRTVDSELYSEQLMILKQ*VKRKRPELINRRDVIFHHD 180
KK+M +WW G+IHY L PG T+ SE Y++++ + Q ++R + L+NR+ I HD
Sbjct: 516 KKVMVTIWWSAAGLIHYSFLNPGETITSEKYAQEIDEMNQKLQRLQLALVNRKGPILLHD 575
Query: 181 NARPHTSLAAQQKLREFGWEVLMHLRIVLTLHLQIST*CRSLQNF*VVSGIHH*R-LPNQ 357
NARPH + QKL E G+EVL H L + L NF H+ + N
Sbjct: 576 NARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENA 635
Query: 358 LPRYFDQKPQNFYSYGIMSLPTR*QKVIEQNGTY 459
+ + + +FY+ GI L R QK ++ NG+Y
Sbjct: 636 FQEFVESQSTDFYATGINQLIFRWQKCVDCNGSY 669
>U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein.
Length = 351
Score = 65.3 bits (152), Expect = 2e-10
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +1
Query: 4 KMMPCLWWDWKGIIHYELLPPGRTVDSELYSEQLMILKQ*VKRKRPELINRRDVIFHHDN 183
K+M ++WD +GI+ + L RT+ S Y L L + + KRP +++R V+ HHDN
Sbjct: 197 KVMATVFWDAQGILLVDFLEGQRTITSAYYESVLRKLAKALAEKRPGKLHQR-VLLHHDN 255
Query: 184 ARPHTSLAAQQKLREFGWEVLMH 252
A H+S + LREF WE++ H
Sbjct: 256 APAHSSHQTRAILREFRWEIIRH 278
Score = 37.1 bits (82), Expect = 0.058
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 PYSPDLAPSDFYLMSVSSEFLGSVRYTSLKTAKPIAALF-*SEAPKF 392
PYSPDLAPSDF+L + L ++S+ K A + S+ P+F
Sbjct: 280 PYSPDLAPSDFFLFPNLKKSLKGTHFSSVNNVKKTALTWLNSQDPQF 326
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,337,770
Number of Sequences: 237096
Number of extensions: 1965600
Number of successful extensions: 3479
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3464
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -