Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00252
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   2.7  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   3.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.5  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   8.2  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 1   PPYCTPADNYWETDCGNFTASLAYF 75
           P Y +P D  W+ D  N  +S+ ++
Sbjct: 216 PLYASPLDGEWQRDNLNANSSITHW 240


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 232 VHPQCSKCSE 203
           +H +CSKCSE
Sbjct: 71  LHTECSKCSE 80


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +3

Query: 138 ELFIILF*RRRCPTIVRRYKKFSEHLEHCGCTPKRCYTGRKVKFILRLLKGRLE 299
           E  I  F      +I RRY   +E +E    +PK  +  +K+  + R+L   +E
Sbjct: 574 EFQIFTFLMSLLQSIKRRYVLLNEKVEAIKTSPKMRHELQKLAQVYRILGETIE 627


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 235 GVHPQCSKCSENFLYRRTI 179
           G   +C  C E+FL  RTI
Sbjct: 76  GFLKECYCCRESFLRERTI 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,477
Number of Sequences: 336
Number of extensions: 3348
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)