Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00251
(317 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ... 33 0.034
U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical pr... 30 0.31
U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical pr... 30 0.31
U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical pr... 30 0.31
Z80215-8|CAB02275.1| 381|Caenorhabditis elegans Hypothetical pr... 29 0.73
AC024831-10|AAK72074.2| 521|Caenorhabditis elegans Hypothetical... 29 0.73
Z81038-17|CAB76409.1| 381|Caenorhabditis elegans Hypothetical p... 29 0.96
AL032656-5|CAB76732.1| 381|Caenorhabditis elegans Hypothetical ... 29 0.96
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 27 3.9
AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 27 3.9
Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical p... 26 5.1
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 26 5.1
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 26 5.1
AF040655-10|AAB95045.1| 195|Caenorhabditis elegans Hypothetical... 26 5.1
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 26 5.1
Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z49907-8|CAN99663.1| 499|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z49907-7|CAA90088.1| 497|Caenorhabditis elegans Hypothetical pr... 26 6.8
U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeas... 26 6.8
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 26 6.8
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 26 6.8
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 26 6.8
Z70780-4|CAD54137.2| 786|Caenorhabditis elegans Hypothetical pr... 25 8.9
U23176-4|AAC46716.1| 632|Caenorhabditis elegans Fem-3 mrna bind... 25 8.9
>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
protein F28H6.4 protein.
Length = 1000
Score = 33.5 bits (73), Expect = 0.034
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 124 KNSRNGXXXXXXPQRQRPTGERYKRKDTSTRSNGPATGDA 243
+ S+N PQ+ RP G YK K RSNG ATG +
Sbjct: 530 ETSKNSIKYPYVPQQSRPRGY-YKMKKLPARSNGSATGSS 568
>U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical
protein T27F7.2c protein.
Length = 331
Score = 30.3 bits (65), Expect = 0.31
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +1
Query: 109 MLQLFKNSRNGXXXXXXPQRQRPTGERYKRKDTSTRSNGPATGDAGTCGSASTPPRKPDE 288
+LQL +N P+ RPT TST S ++ G+ S T P P
Sbjct: 82 LLQL-QNQMRCAASSPVPEEPRPTDLCAASTTTSTSSVASSSSSNGSSSSTDTSPVPPAP 140
Query: 289 QTAL 300
QTAL
Sbjct: 141 QTAL 144
>U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical
protein T27F7.2b protein.
Length = 722
Score = 30.3 bits (65), Expect = 0.31
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +1
Query: 109 MLQLFKNSRNGXXXXXXPQRQRPTGERYKRKDTSTRSNGPATGDAGTCGSASTPPRKPDE 288
+LQL +N P+ RPT TST S ++ G+ S T P P
Sbjct: 451 LLQL-QNQMRCAASSPVPEEPRPTDLCAASTTTSTSSVASSSSSNGSSSSTDTSPVPPAP 509
Query: 289 QTAL 300
QTAL
Sbjct: 510 QTAL 513
>U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical
protein T27F7.2a protein.
Length = 732
Score = 30.3 bits (65), Expect = 0.31
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +1
Query: 109 MLQLFKNSRNGXXXXXXPQRQRPTGERYKRKDTSTRSNGPATGDAGTCGSASTPPRKPDE 288
+LQL +N P+ RPT TST S ++ G+ S T P P
Sbjct: 461 LLQL-QNQMRCAASSPVPEEPRPTDLCAASTTTSTSSVASSSSSNGSSSSTDTSPVPPAP 519
Query: 289 QTAL 300
QTAL
Sbjct: 520 QTAL 523
>Z80215-8|CAB02275.1| 381|Caenorhabditis elegans Hypothetical
protein C36B1.10 protein.
Length = 381
Score = 29.1 bits (62), Expect = 0.73
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 155 ICHKDNDPQENVINERTHLLEVTDQQQETL--VPVDQRPHH 271
ICH+D PQ + N T LL+++D + V Q+ +H
Sbjct: 148 ICHRDIKPQNLLYNADTGLLKISDYGSSAIESVKTPQQSYH 188
>AC024831-10|AAK72074.2| 521|Caenorhabditis elegans Hypothetical
protein Y55F3C.3a protein.
Length = 521
Score = 29.1 bits (62), Expect = 0.73
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 137 MGCCYSICHKDNDPQENVINERTHLLEVTDQQQETLVPVDQRPHHRGN 280
M C DN P I++R+ + + ++PVD RP H+G+
Sbjct: 12 MAACERENSVDNQPDRASIDDRSSNKNYDEDVESRMIPVD-RPSHKGS 58
>Z81038-17|CAB76409.1| 381|Caenorhabditis elegans Hypothetical
protein Y106G6E.1 protein.
Length = 381
Score = 28.7 bits (61), Expect = 0.96
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 155 ICHKDNDPQENVINERTHLLEVTD 226
ICH+D PQ + N T LL+++D
Sbjct: 148 ICHRDIKPQNLLYNAETGLLKISD 171
>AL032656-5|CAB76732.1| 381|Caenorhabditis elegans Hypothetical
protein Y106G6E.1 protein.
Length = 381
Score = 28.7 bits (61), Expect = 0.96
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 155 ICHKDNDPQENVINERTHLLEVTD 226
ICH+D PQ + N T LL+++D
Sbjct: 148 ICHRDIKPQNLLYNAETGLLKISD 171
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Frame = +1
Query: 160 PQRQRPTGER--YKRKDTSTRSNGPATGDAGTCGSASTP-----PRKPDEQTALNRIL 312
P+ + P+G+ Y +K S R P+ + A +P P PD Q ALN IL
Sbjct: 107 PRPESPSGDSPSYSKKSRSFRDFYPSLSSTPSFDPAQSPHTPHPPVLPDPQQALNDIL 164
>AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical
protein C54E4.1 protein.
Length = 245
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 197 ERTHLLEVTDQQQETLVPVDQR-PHHRGNQTNR 292
+R L D Q L P+ Q+ PHHR N T +
Sbjct: 179 KRLSLTPYPDPQLPRLSPLQQQQPHHRSNSTKK 211
>Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical
protein T04A8.10 protein.
Length = 234
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 172 RPTGERYKRKDTSTRSNGPATGDAGTCGSASTPPRKPDEQTA 297
R T E +K + GP T STP RK D +TA
Sbjct: 60 RNTDEPPNKKQKEVPNQGPTTLPTDFFDDESTPFRKDDSKTA 101
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 175 PTGERYKRKDTSTRSNGPATGDAGTCGSAST 267
P G+ KRK T+ +NG T DA S+
Sbjct: 1473 PEGDAKKRKPTNNHTNGMHTPDASPAQGTSS 1503
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 149 YSICHKDNDPQENVINERTHLLEVTDQQQETLVP 250
Y + K++DP++ +TH L+ QQQE ++P
Sbjct: 1879 YKLIGKESDPKK-----KTHKLDNKPQQQEPIIP 1907
>AF040655-10|AAB95045.1| 195|Caenorhabditis elegans Hypothetical
protein T24E12.11 protein.
Length = 195
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 92 DTSLHSCFNSLKTAVMGCCYSICHKDNDPQENVINERTHLLEVTDQQQETLVPVDQR 262
D L+S SL ++ + C + +D D + + + T+QQQE VP Q+
Sbjct: 52 DYGLNSGLPSLGSSALYCATPV--EDADAFDTSLESTESSIATTEQQQEFTVPEQQQ 106
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 149 YSICHKDNDPQENVINERTHLLEVTDQQQETLVP 250
Y + K++DP++ +TH L+ QQQE ++P
Sbjct: 504 YKLIGKESDPKK-----KTHKLDNKPQQQEPIIP 532
>Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical
protein F15A2.6b protein.
Length = 835
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 113 FNSLKTAVMGC-CYSICHKDNDPQENVINERTHL 211
F + +A+ C ++ICH+D P+ +++ER ++
Sbjct: 150 FRQIISALDFCHAHNICHRDLKPENLLLDERNNI 183
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical
protein F15A2.6a protein.
Length = 914
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 113 FNSLKTAVMGC-CYSICHKDNDPQENVINERTHL 211
F + +A+ C ++ICH+D P+ +++ER ++
Sbjct: 150 FRQIISALDFCHAHNICHRDLKPENLLLDERNNI 183
>Z49907-8|CAN99663.1| 499|Caenorhabditis elegans Hypothetical
protein B0491.6b protein.
Length = 499
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 169 QRPTGERYKRKDTSTRSNGPATGDAGTCGSASTPPRKPDEQTA 297
Q P +YKRK+ P T + T S T P E +A
Sbjct: 82 QAPPKRKYKRKEAPIEDAQPTTTSSATLASLLTLNPVPIESSA 124
>Z49907-7|CAA90088.1| 497|Caenorhabditis elegans Hypothetical
protein B0491.6a protein.
Length = 497
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 169 QRPTGERYKRKDTSTRSNGPATGDAGTCGSASTPPRKPDEQTA 297
Q P +YKRK+ P T + T S T P E +A
Sbjct: 80 QAPPKRKYKRKEAPIEDAQPTTTSSATLASLLTLNPVPIESSA 122
>U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 1 protein.
Length = 2500
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 104 HSCFNSLKTAVMGCCYSICHKDNDPQENVINERTHLLEV 220
H C+ +L V I H DN +N IN LL +
Sbjct: 2027 HRCYYTLDAFVKLMALMIRHSDNGQSQNKINLLKKLLNI 2065
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 113 FNSLKTAVMGC-CYSICHKDNDPQENVINERTHL 211
F + +A+ C ++ICH+D P+ +++ER ++
Sbjct: 150 FRQIISALDFCHAHNICHRDLKPENLLLDERNNI 183
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 169 QRPTGERYKRKDTSTRSNGPATGDAGTCGSASTPPR-KPDEQTA 297
Q+PT + T+T + P T +A T ST +P+++T+
Sbjct: 479 QKPTEAPTTEEPTTTTTEEPTTPEASTSSETSTTENSEPNQKTS 522
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 160 PQRQRPTGERYKRKDTSTRSNGPATGDAGTCGSASTPPRKP 282
P + P GER ++ DT+ S P + T S PP P
Sbjct: 227 PGARGPPGERGEKGDTAFLSTYPRVASSSTASSPG-PPGPP 266
>Z70780-4|CAD54137.2| 786|Caenorhabditis elegans Hypothetical
protein F46B6.5b protein.
Length = 786
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +1
Query: 160 PQRQRPTGERYKRKDTSTRSNGPATGDAGTCGSASTPPRKPDEQ 291
PQ+ RP E+ + +DT D + S S+ P+++
Sbjct: 449 PQQSRPVEEQKRHRDTEKERERDHESDRESISSTSSRSNAPEKR 492
>U23176-4|AAC46716.1| 632|Caenorhabditis elegans Fem-3 mrna binding
factor protein 2 protein.
Length = 632
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 32 SIFIHAKRSRYKTFMQSDDEDTSLHS 109
++F+ RSR +F+QSD + + L S
Sbjct: 94 NVFMPVSRSRTSSFIQSDTDSSRLES 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,189,487
Number of Sequences: 27780
Number of extensions: 132315
Number of successful extensions: 565
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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