Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00250
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.018
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           24   0.91 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   3.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   4.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 0.018
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 37  CVCFHNYKFFMLFLGYALLYCLFVMATCLPYF 132
           C+ ++ Y  F++F  + L YC+ ++  C+ YF
Sbjct: 211 CI-YYFYSAFIIFTIHLLFYCVLIILLCIYYF 241



 Score = 23.8 bits (49), Expect = 0.91
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 40  VCFHNYKFFMLFLGYALLYCLFVMATCLPYFIR 138
           + F  +  F+L + Y   YC  ++  C+ YF R
Sbjct: 273 IIFTMHLLFLLCIYY--FYCALIILLCIYYFCR 303


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 407 HKPRRRLRISGTSRTPAADVHEPPGPMATSP 499
           H P++ + +SG+   P   V +   P+A +P
Sbjct: 24  HSPQQSIIVSGSITQPTKTVIQSKRPLAPAP 54


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 101 SLSWRHACRISYDFGRATSVQRHRVVVITSY 193
           SLSW + C I+    +    Q H+    T Y
Sbjct: 176 SLSWNNPCSINSTSSQPVGTQIHQQTNHTFY 206


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/16 (37%), Positives = 7/16 (43%)
 Frame = -3

Query: 499 WTRSHGSWGLVNVCSW 452
           W   HG WG     +W
Sbjct: 487 WYLDHGFWGTTEYHNW 502


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 169 SSGRYHIIFAFFVSLMFAISLGSLFGYHCTSSS 267
           SSG++ +   +   L  A ++G+ FG H T S+
Sbjct: 230 SSGQHLLQDTYKSMLPGAQTVGASFGLHATGSA 262


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 404 IHKPRRRLRISGTSRTPA 457
           I  PR+RLR +  +RT A
Sbjct: 283 IRGPRKRLRFAYVTRTGA 300


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/36 (25%), Positives = 14/36 (38%)
 Frame = +1

Query: 346 LSKTSRKCSVIVRTSGWCLYSQASATAANIRYVANT 453
           L K +     ++   GW   +Q     A+ RY   T
Sbjct: 154 LKKANPSLKTLLAIGGWSFGTQKFKDMASTRYARQT 189


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = +1

Query: 13  HHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYF 132
           H+C +V +   F +Y+ +M ++   ++   F     + YF
Sbjct: 114 HYCLFVASNCFFWSYQSYMSYIFANIMGLEFYKQFAIEYF 153


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = +1

Query: 13  HHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYF 132
           H+C +V +   F +Y+ +M ++   ++   F     + YF
Sbjct: 114 HYCLFVASNCFFWSYQSYMSYIFANIMGLEFYKQFAIEYF 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,347
Number of Sequences: 336
Number of extensions: 3075
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)