Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00250
(513 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c... 53 3e-08
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 44 1e-05
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 44 1e-05
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 41 1e-04
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 40 3e-04
SPAC4D7.12c |fet5||transcription factor Fet5|Schizosaccharomyces... 29 0.54
SPCC306.06c |||ER membrane protein, BIG1 family |Schizosaccharom... 28 0.71
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 28 0.71
SPBC409.20c |psh3||ER chaperone SHR3 homologue Psh3|Schizosaccha... 28 0.94
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.94
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 1.6
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 27 1.6
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 1.6
SPBC146.11c |mug97|meu33|meiotically upregulated gene Mug97|Schi... 27 2.2
SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|ch... 27 2.2
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 27 2.2
SPCC16A11.03c |||DUF2009 protein|Schizosaccharomyces pombe|chr 3... 26 3.8
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 25 6.7
SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomy... 25 6.7
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 25 8.8
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 8.8
>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 52.8 bits (121), Expect = 3e-08
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 LKMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKGDFGTATSSG- 177
L+MDHHC W NCV F N+KFF L Y LY + V+ + F+ + K T T+ G
Sbjct: 121 LRMDHHCMWFKNCVGFRNHKFFFLECFYLNLYSICVLYST---FVAITK----TFTAEGA 173
Query: 178 RYHIIFAFFVSLMFAISLG 234
I+ F +FA ++G
Sbjct: 174 NISAIYLVFWGFLFAFAVG 192
Score = 52.8 bits (121), Expect = 3e-08
Identities = 22/61 (36%), Positives = 39/61 (63%)
Frame = +3
Query: 258 LVVNNRTTLEAFRAPMFRGGADKNGFSIGAFKNFKEVFGNSPNLWLVPVFTSLGDGCEYP 437
L+++N +TLE+ + R F++G ++N+ ++ G SP LWL+P S+G+G EYP
Sbjct: 207 LLIHNLSTLESMSSSWSRYTHSTQPFNVGWYENWCQIMGKSPFLWLLPFPNSIGEGVEYP 266
Query: 438 V 440
+
Sbjct: 267 L 267
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 44.4 bits (100), Expect = 1e-05
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Frame = +1
Query: 7 MDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKGDFGTATSSG--- 177
+DHHC W+N C+ NY+++ +FL +L L++ T L ++ + G F +T +
Sbjct: 208 LDHHCIWLNTCIGRRNYRYYFIFLLSVVLSALYL--TGLGFYTSI--GSFHESTDTNFAA 263
Query: 178 ---RYHIIFAFFVSL---MFAISLGSLFGYHCTSSSIIEQL*KRLERRCSE 312
R +FF+ + + AI G LF Y C S+ + + + L + +E
Sbjct: 264 HLRRPWAGVSFFLGIYGALGAILPGILFCYQCYLISVGQNVHEYLRAKSTE 314
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 44.0 bits (99), Expect = 1e-05
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFL 78
K DHHC W+NNCV +N ++F LFL
Sbjct: 183 KFDHHCIWINNCVGLNNARYFFLFL 207
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 40.7 bits (91), Expect = 1e-04
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFL 78
+ DHHCPW NCV N++ F+LF+
Sbjct: 425 RYDHHCPWTGNCVGARNHRTFLLFV 449
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 39.5 bits (88), Expect = 3e-04
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYAL-LYCLFVMATCL 123
K DH+C +V VCF N KFF FL Y C+ +++T +
Sbjct: 138 KFDHYCSFVGKDVCFSNQKFFYQFLFYGFSAACMVLISTAI 178
>SPAC4D7.12c |fet5||transcription factor Fet5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 276
Score = 28.7 bits (61), Expect = 0.54
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 275 SIIDDEVQWYPNSEPRD 225
S IDD QWY + EP+D
Sbjct: 247 SYIDDATQWYEDQEPKD 263
>SPCC306.06c |||ER membrane protein, BIG1 family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 28.3 bits (60), Expect = 0.71
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 315 GADKNGFSIGAFKNFKEVFGNSPNLWLVP 401
G + N F +GAFK+ K V SP L+P
Sbjct: 71 GLEVNDFQLGAFKHLKRVSLQSPYSLLLP 99
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 0.71
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -3
Query: 406 NTGTNQRFGLLPNTSLKFLKAPIEKPFLSAPPRNIGALNASKVVLLLTTRYNGIRIVNPE 227
N+ +N +LPN +L ++ KP L+ P + SKV ++ N +V P
Sbjct: 77 NSSSNTGGNVLPNPALTPVRNMSNKPPLTWSPSSANLFGTSKVTSIIGN--NVSDVVPPV 134
Query: 226 ISRTLAT 206
I + LA+
Sbjct: 135 IKKALAS 141
>SPBC409.20c |psh3||ER chaperone SHR3 homologue
Psh3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 27.9 bits (59), Expect = 0.94
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 184 HIIFAFFVSLMFAISLGSLFGYHCTSSSIIEQL*KRLERRCSEAAPTKMAS 336
H++ F ++ + I LG +FGYH S E E+ +E A + S
Sbjct: 147 HVLVEFLLAGVILIQLGYVFGYHVQSIQQREYAEDMREQELAEKAKLESES 197
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 27.9 bits (59), Expect = 0.94
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 424 PSPRLVNTGTNQRFGLLPNTSLKFLKAPIEKPFLSAPPR 308
P PR V+ ++ G +P + +P++KP APP+
Sbjct: 191 PPPRRVSQNSSYASGSVPAATAASTASPVKKPPPPAPPK 229
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.1 bits (57), Expect = 1.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 376 LPNTSLKFLKAPIEKPFLSAPPRNIGALNASKVVL 272
L + SL+F P+ KP LS+ P N S + L
Sbjct: 2406 LTDNSLRFAPVPMTKPILSSLPEVFSKHNGSAIPL 2440
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 27.1 bits (57), Expect = 1.6
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 69 AVPWLRAAVLSLCH 110
A+PWLR + L+LCH
Sbjct: 539 AIPWLRLSGLALCH 552
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 27.1 bits (57), Expect = 1.6
Identities = 30/105 (28%), Positives = 45/105 (42%)
Frame = +1
Query: 163 ATSSGRYHIIFAFFVSLMFAISLGSLFGYHCTSSSIIEQL*KRLERRCSEAAPTKMASQL 342
ATS+ Y + V+ IS GS Y TSSS I + S +A K S
Sbjct: 190 ATSTSSYVAPVSSSVASSSEISAGSATSYVPTSSSSIAL--SSVVASASVSAANKGVSTP 247
Query: 343 VLSKTSRKCSVIVRTSGWCLYSQASATAANIRYVANTSCRRSRAP 477
+S + S +V + + S A++ AA+ + TS S +P
Sbjct: 248 AVSSAAASSSAVVSS----VVSSATSVAASSTISSATSSSASASP 288
>SPBC146.11c |mug97|meu33|meiotically upregulated gene
Mug97|Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 375 NSPNLWLVPVFTSLGDGCEYPVRREH 452
N P+++ V S G CEY +RR+H
Sbjct: 204 NRPSIFYVLQGISFGPECEYVLRRKH 229
>SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 505
Score = 26.6 bits (56), Expect = 2.2
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 67 MLFLGYALLYCLFVMATCLPYFIRLWKGDFGTATSSGR---YHIIFAFFVSLMFAISLGS 237
++FL Y+L LF M++ Y I L DF + YH+ + + ++ + I LG
Sbjct: 370 VMFLLYSLAPILFRMSSATFYNISLLTSDFWSLVIGIHVFGYHVYWLYPIAFVLII-LG- 427
Query: 238 LFGYH 252
LF YH
Sbjct: 428 LFVYH 432
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 392 VGACIHKPRRRLRISGTSRTPAADVHE 472
+G+ IHKP R + GTS P +D H+
Sbjct: 79 MGSLIHKPSRAHSLGGTSE-PVSDDHK 104
>SPCC16A11.03c |||DUF2009 protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 15 PLPLGEQLRLLPQLQVLHAVPWLRAAVLSLCHGDMP 122
PL R+L +Q +PW+ ++V+ L D+P
Sbjct: 325 PLVRSTVTRILSSVQKQQEIPWMGSSVIHLGDRDVP 360
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 25.0 bits (52), Expect = 6.7
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 316 PPRNIGALNASKVVLLLTTRYNGI-RIVNPEISRTLATRKKRI*CDNDHSMSLYRSR 149
PPR++ A KV LL ++ NG+ +VN K I D ++ + R+R
Sbjct: 374 PPRSLSYNPAEKVALLTSSADNGVYELVNVSSRSNSLPLKDNIKGPGDDAIFVARNR 430
>SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1142
Score = 25.0 bits (52), Expect = 6.7
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 168 IEWSLSHH--IRFFRVANVRDISGFTIRIPLYLVVNNRTTLEAFRAPMFRGGADKNGFSI 341
IE S+S H +R + A++ +S + L+LV N L F G D
Sbjct: 690 IEDSISLHRDVRDSKDAHILKVSNKLRKQILHLVEQN--CLLIFD---LHNGTDDTIVKS 744
Query: 342 GAFKNFKEVFGNSPNLWL 395
F+ F+E FGNS WL
Sbjct: 745 HNFQKFEEEFGNSRKEWL 762
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 24.6 bits (51), Expect = 8.8
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -3
Query: 376 LPNTSLKFLKAPIEKPFLSA-PPRNI 302
+PN S++ P EKP+LS+ P N+
Sbjct: 85 VPNQSIQGSSLPSEKPYLSSNQPTNV 110
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 24.6 bits (51), Expect = 8.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 331 PFLSAPPRNIGALNASKVVLLLTTRYNGIRIVNPEISRTLATR 203
P L P + +++SK L T NG+R PE++ ++TR
Sbjct: 517 PRLRGSPIHNQPVSSSKSTASLNTNNNGLRASTPEMA-NISTR 558
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,264,178
Number of Sequences: 5004
Number of extensions: 49470
Number of successful extensions: 159
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 206265012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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