Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00250
(513 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_15004| Best HMM Match : zf-DHHC (HMM E-Value=2.7e-27) 50 1e-06
SB_55318| Best HMM Match : zf-DHHC (HMM E-Value=2.5e-12) 39 0.002
SB_30152| Best HMM Match : Ank (HMM E-Value=1.8e-23) 35 0.045
SB_5030| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_31936| Best HMM Match : Glyco_hydro_65C (HMM E-Value=1.1) 31 0.42
SB_23784| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_20300| Best HMM Match : hATC (HMM E-Value=0.036) 31 0.56
SB_13614| Best HMM Match : hATC (HMM E-Value=0.45) 31 0.56
SB_11341| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_6514| Best HMM Match : hATC (HMM E-Value=0.024) 31 0.56
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 31 0.56
SB_48175| Best HMM Match : hATC (HMM E-Value=0.024) 31 0.56
SB_47551| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_47422| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_40860| Best HMM Match : MAAL_N (HMM E-Value=0.6) 31 0.56
SB_40436| Best HMM Match : EGF_CA (HMM E-Value=0.0038) 31 0.56
SB_11985| Best HMM Match : hATC (HMM E-Value=0.022) 31 0.56
SB_57040| Best HMM Match : Glyco_hydro_65C (HMM E-Value=1.9) 31 0.74
SB_29307| Best HMM Match : hATC (HMM E-Value=0.054) 31 0.74
SB_57822| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_3166| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.97
SB_55137| Best HMM Match : hATC (HMM E-Value=0.059) 29 2.2
SB_35601| Best HMM Match : PKD_channel (HMM E-Value=0) 29 3.0
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_57559| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_4907| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_37397| Best HMM Match : PEPCK (HMM E-Value=0) 27 6.9
SB_33334| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_22316| Best HMM Match : fn3 (HMM E-Value=0.0034) 27 6.9
SB_26590| Best HMM Match : 7tm_1 (HMM E-Value=6.4e-17) 27 6.9
SB_58134| Best HMM Match : DAGAT (HMM E-Value=0) 27 9.1
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 9.1
SB_51179| Best HMM Match : VWA (HMM E-Value=3.2e-18) 27 9.1
SB_15433| Best HMM Match : Arm (HMM E-Value=9.7) 27 9.1
>SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +3
Query: 207 VANVRDISGFTIRIPLYLVVNNRTTL-EAFRAPMFRGGADKNGFSIGA-FKNFKEVFGNS 380
V N ++ R+ L RT E+FR P R G K+ F +G KN ++VFG S
Sbjct: 224 VENGENVREVLTRVSKNLPTATRTLSGESFRVPHLRYGPSKDAFHLGTRLKNVEQVFGTS 283
Query: 381 PNLWLVPVFTSLGDGCEYPVRREHQLQTFTSPQDPWL 491
+W +PVFTS GDG +P++ + D W+
Sbjct: 284 VIMWFLPVFTSQGDGVNFPLKHSPESDRLLDNGDRWM 320
>SB_15004| Best HMM Match : zf-DHHC (HMM E-Value=2.7e-27)
Length = 559
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFI------RLWKGDFGTA 165
+ DHHC WVNNC+ +NY FF+ F+ A C++V + F+ RL +G +
Sbjct: 77 RFDHHCSWVNNCIGANNYGFFIGFIFTAAALCIYVTFLVMIVFVYISITQRLLEGQY-VD 135
Query: 166 TSSGRYHIIFAFFVSLMFAISL 231
+ Y I V + + I++
Sbjct: 136 SEGNEYSITIRHVVQVEYPITI 157
>SB_55318| Best HMM Match : zf-DHHC (HMM E-Value=2.5e-12)
Length = 341
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = +1
Query: 7 MDHHCPWVNNCVCFHNYKFFMLF-------LGYALLYCLFVMATCLPYF 132
M HHCP+ NNC+ NY ++ F LGYA +F C+ ++
Sbjct: 152 MCHHCPFTNNCIGLRNYIYYYSFLLQAVVGLGYACYLAIFPFQKCMYHY 200
>SB_30152| Best HMM Match : Ank (HMM E-Value=1.8e-23)
Length = 393
Score = 34.7 bits (76), Expect = 0.045
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 1 LKMDHHCPWVNNCVCFHNYKFFMLFLGYALL-YCLFVMA 114
L +DHHC ++ CV + N++ F++F+ LL LFV A
Sbjct: 249 LAIDHHCLFLMCCVGYKNHRAFVVFMSLVLLSQMLFVRA 287
>SB_5030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 33.5 bits (73), Expect = 0.10
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 1 LKMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLF 105
L+ DHHC + CV NY++++ Y L L+
Sbjct: 130 LRRDHHCIFAGKCVGHSNYRYYLFLAFYLWLGALY 164
>SB_31936| Best HMM Match : Glyco_hydro_65C (HMM E-Value=1.1)
Length = 291
Score = 31.5 bits (68), Expect = 0.42
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 158 LVFSCYEKLHAVAQACQAAHFPNVRAVAAAIAEENPAQNVAAL 200
>SB_23784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 273 LVFSCYEKLHAVAQACQAPHFPNVRAVAAAIAEENPAQNVAAL 315
>SB_20300| Best HMM Match : hATC (HMM E-Value=0.036)
Length = 423
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 225 LVFSCYEKLHAVAQACQAPHFPNVRAVAAAIAEENPAQNVAAL 267
>SB_13614| Best HMM Match : hATC (HMM E-Value=0.45)
Length = 228
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 39 LVFSCYEKLHAVAQACQAPHFPNVRAVAAAIAEENPAQNVAAL 81
>SB_11341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 225 LVFSCYEKLHAVAQACQAPHFPNVRAVAAAIAEENPAQNVAAL 267
>SB_6514| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 620
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 422 LVFSCYEKLHAVAQACQAPHFPNVRAVAAAIAEENPAQNVAAL 464
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 31.1 bits (67), Expect = 0.56
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 97 CLFVMATCLPYFIRLWKGDFGTATSSGRY 183
C FV + C P IR W GDF + G Y
Sbjct: 1286 CWFVKSDCDPSAIRRWMGDFSSIRCVGTY 1314
>SB_48175| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 620
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 422 LVFSCYEKLHAVAQACQAPHFPNVRAVAAAIAEENPAQNVAAL 464
>SB_47551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 462 LVFSCYEKLHAVAQACQAPHFPNVRAVATAIAEENPAQNVAAL 504
>SB_47422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 62 LVFSCYEKLHAVAQACQALHFPNVRAVAAAIAEENPAQNVAAL 104
>SB_40860| Best HMM Match : MAAL_N (HMM E-Value=0.6)
Length = 538
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 421 LVFSCYEKLHAVAQACQAPHFPNVRAVAAAIAEENPAQNVAAL 463
>SB_40436| Best HMM Match : EGF_CA (HMM E-Value=0.0038)
Length = 676
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 478 LVFSCYEKLHAVAQACQAPHFPNVRAVAAAIAEENPAQNVAAL 520
>SB_11985| Best HMM Match : hATC (HMM E-Value=0.022)
Length = 865
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 475 LVFSCYEKLHAVAQACQAPHFPNVRAVAAAIAEENPAQNVAAL 517
>SB_57040| Best HMM Match : Glyco_hydro_65C (HMM E-Value=1.9)
Length = 269
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLE 357
LVF+ Y AVA+AC+ H P VR + E
Sbjct: 231 LVFSCYEKLHAVAQACQAPHFPNVRAVAAAIAE 263
>SB_29307| Best HMM Match : hATC (HMM E-Value=0.054)
Length = 235
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 39 LVFSCYEKVHAVAQACQAPHFPNVRAVAAAITEENPAQNVAAL 81
>SB_57822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ H P VR + E + N A+
Sbjct: 231 LVFSCYEKVHAVAQACQAPHFPNVRAVAAAITEENPAQNVAAL 273
>SB_3166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 30.3 bits (65), Expect = 0.97
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTI 375
LVF+ Y AVA+AC+ H P VR +
Sbjct: 388 LVFSCYEKLHAVAQACQAPHFPNVRAV 414
>SB_55137| Best HMM Match : hATC (HMM E-Value=0.059)
Length = 619
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 452 VFATYRIFAAVAEACEYRHQPEVRTITEHFLE 357
VF+ Y AVA+AC+ H P VR + E
Sbjct: 422 VFSCYEKLHAVAQACQAPHFPNVRAVAAAIAE 453
>SB_35601| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 2497
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 61 FFMLFLGYALLYCLFVMATCLPYFIRLW 144
F + +GY +L C+ V LPYF +W
Sbjct: 1967 FLLYVMGYLVLICVEVYRKKLPYFKDIW 1994
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 455 LVFATYRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
LVF+ Y AVA+AC+ + P VR + E + N A+
Sbjct: 765 LVFSCYEKLHAVAQACQAPYFPNVRAVAAAIAEENPAQNVAAL 807
>SB_57559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 236 EPRDIANISDTKKANMM**RPLDVAVPKSPFQSRMK 129
E R+IA IS+ +K P++ A+P +PF + +K
Sbjct: 6 ETREIACISEVRKERRGEVSPIEYAIPSTPFAAIVK 41
>SB_4907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 440 YRIFAAVAEACEYRHQPEVRTITEHFLEVFESTN*EAI 327
Y AVA+AC+ H P VR + E + N EA+
Sbjct: 630 YEKLHAVAQACQAPHFPNVRAVAAAIAEENPAQNVEAL 667
>SB_37397| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 613
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 360 KEVFGNSPNLWLVPVFTSLG-DGCEYPVRREHQLQTFTSPQDPWL 491
+E+ SP + L+P + SL DG + PV E + F+ P+D WL
Sbjct: 533 EEIADPSP-VGLLPKYGSLNLDGLKDPVTPEAWNEMFSIPKDYWL 576
>SB_33334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 145 KGDFGTATSSGRYHIIFAFFVSLMFAISLGSLFGYHCTSSSIIEQ 279
K +FG + GR F F+S + AI + Y C +S+ + Q
Sbjct: 689 KSEFGKVKADGRLRSRFGNFLSDLRAILRANCTVYRCKTSAYVTQ 733
>SB_22316| Best HMM Match : fn3 (HMM E-Value=0.0034)
Length = 3404
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 132 HTTLEGRLRYSDIEWSLSHHIRFFRVANVRDISG 233
+TT+EG + YS + +LSH+ ++F + +G
Sbjct: 1726 YTTVEGVMSYSFVGLALSHNTKYFVSVEAENSAG 1759
>SB_26590| Best HMM Match : 7tm_1 (HMM E-Value=6.4e-17)
Length = 391
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 43 CFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKGDFGTATS 171
C F LF+GY L Y LF +C Y + G F T TS
Sbjct: 77 CLVGVVFLPLFIGYLLSYELF--KSCTFYAVTRAAGCFTTITS 117
>SB_58134| Best HMM Match : DAGAT (HMM E-Value=0)
Length = 288
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 487 HGSWGLVNVCSWCSRRTGYSQP----SPRLVNTGTNQRFGLLPNTSLKFLKAPIEKPFLS 320
HG L + ++CS TG+S+ +P ++ N +F + + + F +EK +
Sbjct: 114 HGIMSLGALGNFCSEATGFSEKFPGITPHILTLAGNMKFPVTRDYMMAFGVCTVEKESIH 173
Query: 319 APPRNIGALNASKVV 275
+G +A+ +V
Sbjct: 174 HIMERMGKGHAAVIV 188
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +1
Query: 286 KRLERRCSEAAPTKMASQLVLSKTSRKCSVIVRTSGWCLYSQASATAANIRYVANTSC 459
K E C + A+Q V + KC+ ++ +Y SA++AN + T+C
Sbjct: 526 KTYENECKLRVESCKANQNVRIISRTKCNACTLSTCNLVYGTCSASSANASCICPTNC 583
>SB_51179| Best HMM Match : VWA (HMM E-Value=3.2e-18)
Length = 465
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 436 RYVANTSCRRSRAPRTHGYESMGI 507
+Y+ + SCR ++A + HGY G+
Sbjct: 95 KYLMDFSCRCAKAAKAHGYTHYGL 118
>SB_15433| Best HMM Match : Arm (HMM E-Value=9.7)
Length = 237
Score = 27.1 bits (57), Expect = 9.1
Identities = 23/80 (28%), Positives = 35/80 (43%)
Frame = +3
Query: 27 GEQLRLLPQLQVLHAVPWLRAAVLSLCHGDMPAVFHTTLEGRLRYSDIEWSLSHHIRFFR 206
G LRL+P+ + W A+ +LC+ D + L +Y + + + H R R
Sbjct: 118 GPILRLIPKYETPAIQHWATWALANLCNVDREYNNVSFLAVTYQYWSYDRARTRHDRRIR 177
Query: 207 VANVRDISGFTIRIPLYLVV 266
N D +G I LYL V
Sbjct: 178 SGNPCD-TGSPKSIVLYLCV 196
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,675,112
Number of Sequences: 59808
Number of extensions: 394256
Number of successful extensions: 1170
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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