Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00250
(513 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g60800.1 68416.m06801 zinc finger (DHHC type) family protein ... 66 1e-11
At4g22750.1 68417.m03283 zinc finger (DHHC type) family protein ... 65 2e-11
At4g00840.1 68417.m00115 zinc finger (DHHC type) family protein ... 62 2e-10
At3g09320.1 68416.m01106 zinc finger (DHHC type) family protein ... 59 2e-09
At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein ... 58 3e-09
At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein ... 56 1e-08
At5g04270.1 68418.m00419 zinc finger (DHHC type) family protein ... 54 4e-08
At3g48760.1 68416.m05325 zinc finger (DHHC type) family protein ... 53 1e-07
At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein ... 52 2e-07
At4g24630.1 68417.m03527 zinc finger (DHHC type) family protein ... 52 3e-07
At3g56930.1 68416.m06332 zinc finger (DHHC type) family protein ... 52 3e-07
At2g40990.1 68415.m05063 zinc finger (DHHC type) family protein ... 51 4e-07
At3g04970.2 68416.m00539 zinc finger (DHHC type) family protein ... 48 5e-06
At3g04970.1 68416.m00540 zinc finger (DHHC type) family protein ... 48 5e-06
At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein ... 47 6e-06
At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein ... 47 9e-06
At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein ... 46 2e-05
At2g14255.1 68415.m01593 zinc finger (DHHC type) family protein ... 43 1e-04
At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein ... 42 2e-04
At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein ... 42 2e-04
At1g69420.2 68414.m07975 zinc finger (DHHC type) family protein ... 40 0.001
At1g69420.1 68414.m07974 zinc finger (DHHC type) family protein ... 40 0.001
At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein ... 38 0.003
At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein ... 38 0.005
At5g05070.1 68418.m00538 zinc finger (DHHC type) family protein ... 33 0.085
At3g51390.1 68416.m05629 zinc finger (DHHC type) family protein ... 33 0.085
At4g33200.1 68417.m04727 myosin, putative similar to myosin (GI:... 32 0.26
At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase fa... 31 0.34
At4g31630.1 68417.m04493 transcriptional factor B3 family protei... 29 2.4
At4g30560.1 68417.m04337 cyclic nucleotide-regulated ion channel... 27 5.6
At4g29200.1 68417.m04177 hypothetical protein 27 5.6
At3g20380.1 68416.m02582 meprin and TRAF homology domain-contain... 27 5.6
At1g68710.1 68414.m07850 haloacid dehalogenase-like hydrolase fa... 27 7.4
At3g57630.2 68416.m06421 exostosin family protein contains Pfam ... 27 9.8
At3g57630.1 68416.m06420 exostosin family protein contains Pfam ... 27 9.8
>At3g60800.1 68416.m06801 zinc finger (DHHC type) family protein
contains DHHC zinc finger domain PF01529
Length = 307
Score = 66.1 bits (154), Expect = 1e-11
Identities = 32/77 (41%), Positives = 42/77 (54%)
Frame = +1
Query: 1 LKMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKGDFGTATSSGR 180
LKMDHHC WV NCV NYK+F+LFL Y L V +P+FI + + T
Sbjct: 151 LKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLVTLVLMPHFIAFFSDEEIPGTPGTL 210
Query: 181 YHIIFAFFVSLMFAISL 231
AF ++L FA+S+
Sbjct: 211 ATTFLAFVLNLAFALSV 227
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/87 (33%), Positives = 43/87 (49%)
Frame = +3
Query: 225 ISGFTIRIPLYLVVNNRTTLEAFRAPMFRGGADKNGFSIGAFKNFKEVFGNSPNLWLVPV 404
+ GF I + + LV N TT+EA+ + K + +G KNF++VFG WL+P
Sbjct: 227 VMGFLI-MHISLVAGNTTTIEAYE----KKTTTKWRYDLGKKKNFEQVFGMDKRYWLIPG 281
Query: 405 FTSLGDGCEYPVRREHQLQTFTSPQDP 485
+T E +RR +LQ P P
Sbjct: 282 YT------EEDLRRMPELQGLEYPSKP 302
>At4g22750.1 68417.m03283 zinc finger (DHHC type) family protein
contains DHHC zinc finger domain PF01529
Length = 302
Score = 65.3 bits (152), Expect = 2e-11
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 LKMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWK-GDFGTATSSG 177
LKMDHHC WV NCV +NYK F+LFL Y L V + LP F+ + GD S G
Sbjct: 140 LKMDHHCVWVVNCVGANNYKSFLLFLFYTFLETTVVAVSLLPIFLVFFSDGDGDITVSPG 199
Query: 178 RYHIIF-AFFVSLMFAISL 231
F AF +++ FA+S+
Sbjct: 200 SLAASFVAFVLNIAFALSV 218
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/95 (27%), Positives = 44/95 (46%)
Frame = +3
Query: 126 VFHTTLEGRLRYSDIEWSLSHHIRFFRVANVRDISGFTIRIPLYLVVNNRTTLEAFRAPM 305
VF + +G + S + S +A + GF I + + LV N TT+EA+
Sbjct: 185 VFFSDGDGDITVSPGSLAASFVAFVLNIAFALSVLGFLI-MHIMLVARNTTTIEAYEKHT 243
Query: 306 FRGGADKNGFSIGAFKNFKEVFGNSPNLWLVPVFT 410
+++G NF++VFG+ W VP++T
Sbjct: 244 VNWP-----YNVGRKTNFEQVFGSDKMYWFVPLYT 273
>At4g00840.1 68417.m00115 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 262
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 LKMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKGDFGTATSSGR 180
LKMDHHC W+ NCV NYKFF+LFL Y L + + LP FI + ++S G+
Sbjct: 80 LKMDHHCVWIVNCVGARNYKFFLLFLFYTFLETMLDVIVLLPSFIEFFSQAIKHSSSPGK 139
Query: 181 Y-HIIFAF 201
++ AF
Sbjct: 140 LASLVLAF 147
>At3g09320.1 68416.m01106 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 286
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +1
Query: 1 LKMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKGDFGTATSSGR 180
L+MDHHC W+NNCV NYK F +F+ YA+ C++ + + + + S R
Sbjct: 121 LRMDHHCIWINNCVGHTNYKVFFVFVVYAVTACVYSLVLLVGSLTVEPQDEEEEMGSYLR 180
Query: 181 YHIIFAFFVSLMFAISLGSLFGYH 252
+ + F+ + +I+LG L G+H
Sbjct: 181 TIYVISAFLLIPLSIALGVLLGWH 204
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +3
Query: 252 LYLVVNNRTTLEAFRAPMFRGGADKNG------FSIGAFKNFKEVFGNSPNLWLVPVFTS 413
+YL++ N+TT+E A+K G + IGA++N + G + WL P
Sbjct: 205 IYLILQNKTTIEYHEGVRAMWLAEKGGQVYKHPYDIGAYENLTLILGPNILSWLCPTSRH 264
Query: 414 LGDGCEY 434
+G G +
Sbjct: 265 IGSGVRF 271
>At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 443
Score = 58.4 bits (135), Expect = 3e-09
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKGDFGTA-----T 168
+ DHHCPWV C+ NY+FF +F+ L C++V A C Y ++ + + T
Sbjct: 174 RFDHHCPWVGQCIGMRNYRFFFMFVFSTTLLCIYVFAFCWVYIRKIMESEHTTTWKAMLK 233
Query: 169 SSGRYHIIFAFFVSLMFAISLGSLFGYH----CTSSSIIEQL*KRLERR 303
+ +I F+S+ F +G L +H T+ + E R +RR
Sbjct: 234 TPASIVLIIYTFISMWF---VGGLTVFHLYLISTNQTTYENFRYRYDRR 279
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 225 ISGFTIRIPLYLVVNNRTTLEAFRAPMFRGGADKNGFSIGAFKNFKEVF 371
+ G T+ LYL+ N+TT E FR +R N + G NFKE F
Sbjct: 251 VGGLTV-FHLYLISTNQTTYENFR---YRYDRRSNPHNKGVVNNFKETF 295
>At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 410
Score = 56.4 bits (130), Expect = 1e-08
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRL 141
+ DHHCPWV C+ NY+FF +F+ L C++V A C Y ++
Sbjct: 172 RFDHHCPWVGQCIAQRNYRFFFMFVFSTTLLCVYVFAFCCVYIKKI 217
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 252 LYLVVNNRTTLEAFRAPMFRGGADKNGFSIGAFKNFKEVF 371
LYL+ N+TT E FR R N + G NFKE+F
Sbjct: 257 LYLISTNQTTYENFRYSYDR---HSNPHNKGVVDNFKEIF 293
>At5g04270.1 68418.m00419 zinc finger (DHHC type) family protein low
similarity to Golgi-specific DHHC zinc figer protein
[Mus musculus] GI:21728103; contains Pfam profile
PF01529: DHHC zinc finger domain
Length = 284
Score = 54.4 bits (125), Expect = 4e-08
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = +1
Query: 1 LKMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKGDFGTATSSGR 180
LKMDHHC W+NNCV + NYK F + + YA + ++ +T L GD +
Sbjct: 129 LKMDHHCLWINNCVGYANYKAFFILVFYATVASIY--STVLLVCCAFKNGDSYAGNVPLK 186
Query: 181 YHIIFAFFVSLMFAISLGSLFGYH 252
I+ + +I+LG+L +H
Sbjct: 187 TFIVSCGIFMIGLSITLGTLLCWH 210
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +3
Query: 252 LYLVVNNRTTLEAFRAPMFRGGADKNG------FSIGAFKNFKEVFGNSPNLWLVPVFT- 410
+YL+ +N TT+E + + A K+G F +G +KN V G + WL P FT
Sbjct: 211 IYLITHNMTTIEHYDSKRASWLARKSGQSYRHQFDVGFYKNLTSVLGPNMIKWLCPTFTR 270
Query: 411 SLGDGCEYPVRRE 449
+ DG + R+
Sbjct: 271 NPEDGISFSASRD 283
>At3g48760.1 68416.m05325 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 476
Score = 53.2 bits (122), Expect = 1e-07
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRL 141
K DHHCPW+ C+ NY+F+ +F+ + L C++V C Y R+
Sbjct: 183 KFDHHCPWLGQCIGLRNYRFYFMFVLCSTLLCIYVHVFCWIYVKRI 228
>At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 338
Score = 52.4 bits (120), Expect = 2e-07
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFV 108
+ DHHCPWV C+ NY FF+ FL + L C++V
Sbjct: 167 RFDHHCPWVGQCIALRNYPFFVCFLSCSTLLCIYV 201
Score = 31.5 bits (68), Expect = 0.34
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 225 ISGFTIRIPLYLVVNNRTTLEAFRAPMFRGGADKNGFSIGAFKNFKEVF 371
+ G T+ YL+ N+TT E FR + +N + G +NFKE+F
Sbjct: 240 VGGLTV-FHFYLICTNQTTCENFR---YHYDKKENPYRKGILENFKELF 284
>At4g24630.1 68417.m03527 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 374
Score = 51.6 bits (118), Expect = 3e-07
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPY 129
+ DHHCPWV C+ NY++F +F+ + L C+++ + Y
Sbjct: 161 RFDHHCPWVGQCIGLRNYRYFFMFVSSSTLLCIYIFSMSAVY 202
>At3g56930.1 68416.m06332 zinc finger (DHHC type) family protein low
similarity to Golgi-specific DHHC zinc figer protein
[Mus musculus] GI:21728103; contains Pfam profile
PF01529: DHHC zinc finger domain
Length = 477
Score = 51.6 bits (118), Expect = 3e-07
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMA 114
+ DHHCPWV C+ NY+FF +F+ + C++V A
Sbjct: 171 RFDHHCPWVGQCIGVRNYRFFFMFISTSTTLCIYVFA 207
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 225 ISGFTIRIPLYLVVNNRTTLEAFRAPMFRGGADKNGFSIGAFKNFKEVF 371
+ G TI YL+ N+TT E FR +R +N ++ G N E+F
Sbjct: 248 VGGLTI-FHSYLICTNQTTYENFR---YRYDKKENPYNKGILGNIWEIF 292
>At2g40990.1 68415.m05063 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 386
Score = 51.2 bits (117), Expect = 4e-07
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFV 108
+ DHHCPWV C+ NY +F+ F+ + L CL+V
Sbjct: 160 RFDHHCPWVGQCIALRNYPYFICFISTSTLLCLYV 194
Score = 34.3 bits (75), Expect = 0.049
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 225 ISGFTIRIPLYLVVNNRTTLEAFRAPMFRGGADKNGFSIGAFKNFKEVF 371
+ G T+ LYL+ N+TT E FR +R +N + G FKN E+F
Sbjct: 234 VGGLTV-FHLYLICTNQTTYENFR---YRYDKKENPYGKGLFKNLYELF 278
>At3g04970.2 68416.m00539 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 316
Score = 47.6 bits (108), Expect = 5e-06
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLF 105
+ DHHC W+NNC+ N K+FM FL + L CL+
Sbjct: 185 RFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLY 218
>At3g04970.1 68416.m00540 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 397
Score = 47.6 bits (108), Expect = 5e-06
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLF 105
+ DHHC W+NNC+ N K+FM FL + L CL+
Sbjct: 185 RFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLY 218
>At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529 DHHC zinc finger domain
Length = 345
Score = 47.2 bits (107), Expect = 6e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 LKMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKG-DFGTATSSG 177
L MDHHCP++ NCV N+K+F+ FL A++ + C+ I + + G A +S
Sbjct: 172 LDMDHHCPFIGNCVGAGNHKYFIAFLISAVISTSYAAVMCVYTLIHILPPIEKGAAYASD 231
Query: 178 RYHIIFAFFVSLM 216
H+ +S++
Sbjct: 232 VAHVAHGNSISIL 244
>At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 499
Score = 46.8 bits (106), Expect = 9e-06
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 10 DHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIR 138
DHHC W+NNCV NY F+L + + LL + T L F+R
Sbjct: 176 DHHCRWLNNCVGKKNYTTFILLMVFVLLMLIIEGGTALAVFVR 218
>At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 718
Score = 45.6 bits (103), Expect = 2e-05
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 DHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLW--KGDFGT----ATS 171
DHHC W+NNCV NY F+ + +LL+ L + +R++ K D T
Sbjct: 201 DHHCRWLNNCVGRKNYMTFISLMAVSLLWLLIEAGVGIAVIVRVFVNKKDMETEIVNRLG 260
Query: 172 SGRYHIIFAFFVSLMFAISLGSLF 243
+G FA V L A+S+ +LF
Sbjct: 261 NGFSRAPFATVVGLCTAVSMLALF 284
>At2g14255.1 68415.m01593 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain;
low similarity to SP:Q96GR4 Zinc finger DHHC domain
containing protein 12 (Zinc finger protein 400) {Homo
sapiens}
Length = 288
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKG 150
+ DHHCPW++NCV N ++F++F+ L T + RLW+G
Sbjct: 140 QFDHHCPWISNCVGKKNKRYFLVFVIMGALTSFVGGTTAVQ---RLWRG 185
>At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 407
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWKGDFGTATSSGR- 180
+ DHHCPW NY++F +F+ A + C+++ + Y L GT + R
Sbjct: 161 RFDHHCPW-------RNYRYFFMFVSSATILCIYIFSMSALYIKVLMDNHQGTVWRAMRE 213
Query: 181 ----YHIIFAFFVSLMFAISLGSLFGYH 252
++ F+SL F +G L G+H
Sbjct: 214 SPWAVMLMIYCFISLWF---VGGLTGFH 238
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 252 LYLVVNNRTTLEAFRAPMFRGGADKNGFSIGAFKNFKEVF 371
LYL+ N+TT E FR +R N ++ G NF E F
Sbjct: 239 LYLISTNQTTYENFR---YRSDNRINVYNRGCSNNFFETF 275
>At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 706
Score = 41.9 bits (94), Expect = 2e-04
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 10 DHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLW 144
DHHC W+NNCV NY F+ + +LL+ + A + +R++
Sbjct: 199 DHHCKWLNNCVGRKNYVTFVSLMSASLLWLIIEAAVGIAVIVRVF 243
>At1g69420.2 68414.m07975 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529: DHHC zinc finger domain
Length = 596
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNY-KFFMLFLGYALLYC------LFVMATCL 123
+ DHHC W+NNC+ NY KFF L + L +FV+ CL
Sbjct: 188 RFDHHCRWLNNCIGKRNYRKFFSLMVSAIFLLIMQWSTGIFVLVLCL 234
>At1g69420.1 68414.m07974 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529: DHHC zinc finger domain
Length = 596
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNY-KFFMLFLGYALLYC------LFVMATCL 123
+ DHHC W+NNC+ NY KFF L + L +FV+ CL
Sbjct: 188 RFDHHCRWLNNCIGKRNYRKFFSLMVSAIFLLIMQWSTGIFVLVLCL 234
>At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein /
ankyrin repeat family protein similar to patsas protein
[Drosophila melanogaster] GI:6002770; contains Pfam
profiles PF00023: Ankyrin repeat, PF01529: DHHC zinc
finger domain
Length = 592
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFFMLFL 78
+ DHHCPWV+NCV N F LFL
Sbjct: 368 QFDHHCPWVSNCVGKKNKWEFFLFL 392
>At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 565
Score = 37.5 bits (83), Expect = 0.005
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 10 DHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIR 138
DHHC W+NNCV NY F+ + + + + + F+R
Sbjct: 171 DHHCRWLNNCVGQKNYISFVCLMAASFFWLIAEFGVGVTVFVR 213
>At5g05070.1 68418.m00538 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 339
Score = 33.5 bits (73), Expect = 0.085
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 4 KMDHHCPWVNNCVCFHNYKFF 66
+ DHHCPWV C+ Y+ F
Sbjct: 196 RFDHHCPWVGQCIARTTYENF 216
>At3g51390.1 68416.m05629 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 340
Score = 33.5 bits (73), Expect = 0.085
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 1 LKMDHHCPWVNNCVCFHNYKFFMLFLGYALLYCLFVMATCLPYFIRLWK 147
L+ DHHC W+ C+ N+ F ++ C++ + + Y + K
Sbjct: 186 LQFDHHCVWLGTCIGQKNHSKFWWYICEETTLCIWTLIMYVDYLSNVAK 234
>At4g33200.1 68417.m04727 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]
Length = 1522
Score = 31.9 bits (69), Expect = 0.26
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 326 KWLLNWCFQKLQGSVR**SE----PLVGACIHKPRRRLRISGTSRTPAADVHEPPGPMAT 493
K L C +K+ G +R + PL+G+CI P+ I+G SR+P + P +
Sbjct: 1247 KQQLTACVEKIYGLIRDNLKKELSPLLGSCIQAPKASRGIAGKSRSPGGVPQQSP----S 1302
Query: 494 SPWAS 508
S W S
Sbjct: 1303 SQWES 1307
>At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase family
protein similar to Potential phospholipid-transporting
ATPase (EC 3.6.3.1) (Chromaffin granule ATPase) from
{Homo sapiens} SP|Q9Y2Q0, {Mus musculus} SP|P98200, {Bos
taurus} SP|Q29449; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase; ESTs gb|T45045 and
gb|AA394473 come from this gene
Length = 1203
Score = 31.5 bits (68), Expect = 0.34
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +3
Query: 315 GADKNGFSIGAFKNFKEVFGNSPNLWLVPVFTSLGDGCEYPVRREHQLQTFTSPQD--PW 488
GA FS A+K F E +P+ WL +F + V + Q++ F W
Sbjct: 1091 GAITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQMRFFPGYHQMIQW 1150
Query: 489 LRVHGH 506
+R GH
Sbjct: 1151 IRYEGH 1156
>At4g31630.1 68417.m04493 transcriptional factor B3 family protein
similar to reproductive meristem gene 1 from [Brassica
oleracea var. botrytis] GI:3170424, [Arabidopsis
thaliana] GI:13604227; contains Pfam profile PF02362: B3
DNA binding domain
Length = 512
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 258 LVVNNRTTLEAFRAPMFRGGADKNGFSIGAFKNFKEV-FGNSPNLWLVPVFTSLGDGCEY 434
L+ +N+ T +AF +R NG G+ FK V G P L L P +S+ +G
Sbjct: 216 LLRHNKKTGQAFMRGGWRSFCRNNGIKAGSICRFKLVQSGIKPVLQLCPNASSIPEGNSS 275
Query: 435 PVRREHQL 458
R++ +
Sbjct: 276 KARKKRNV 283
>At4g30560.1 68417.m04337 cyclic nucleotide-regulated ion channel,
putative similar to cyclic nucleotide and
calmodulin-regulated ion channel cngc6 GI:4581207 from
[Arabidopsis thaliana]
Length = 733
Score = 27.5 bits (58), Expect = 5.6
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 270 NRTTLEAFRAPMFRGGADKNGFSIGAFKNFKEVFGNSPNLWLVPVFTSLG-DGCEYPVRR 446
NR TL + P GGA N S G+FK K S LW + LG +P
Sbjct: 40 NRCTLN-LQGPTRGGGAQGNNVSSGSFK--KGFRKGSKGLWSIGRSIGLGVSRAVFPEDL 96
Query: 447 EHQLQTFTSPQDPWL 491
+ + PQD +L
Sbjct: 97 KVSEKKIFDPQDKFL 111
>At4g29200.1 68417.m04177 hypothetical protein
Length = 457
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 69 AVPWLRAAVLSLCHGDMPAVFHTT 140
A PW+ A LS H +P +FH++
Sbjct: 125 ATPWIFATYLSHGHSLLPTIFHSS 148
>At3g20380.1 68416.m02582 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 375
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 88 LLYCLFVMATCLPYFIRLWKGDFGT 162
LL+CLF+ ++ FIR + DF T
Sbjct: 14 LLFCLFITSSSAGSFIRQFSDDFNT 38
>At1g68710.1 68414.m07850 haloacid dehalogenase-like hydrolase family
protein similar to Potential phospholipid-transporting
ATPase (EC 3.6.3.1) from {Mus musculus} SP|P98200, {Bos
taurus} SP|Q29449, {Homo sapiens} SP|O43520; contains
InterPro accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1200
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +3
Query: 336 SIGAFKNFKEVFGNSPNLWLVPVFTSLGDGCEYPVRREHQLQTFTSPQD--PWLRVHG 503
S GA+K F E S + WL+ +F + Y + Q+ F WLR G
Sbjct: 1102 STGAYKVFVEALAPSLSYWLITLFVVVATLMPYFIYSALQMSFFPMYHGMIQWLRYEG 1159
>At3g57630.2 68416.m06421 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 791
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 300 PMFRGGADKNGFSIGAFKNFKEVFGNSPN 386
P + G ++ +S+G + E FG+SPN
Sbjct: 575 PAYEKGRPEDSYSMGIRQKLAEEFGSSPN 603
>At3g57630.1 68416.m06420 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 793
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 300 PMFRGGADKNGFSIGAFKNFKEVFGNSPN 386
P + G ++ +S+G + E FG+SPN
Sbjct: 577 PAYEKGRPEDSYSMGIRQKLAEEFGSSPN 605
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,064,165
Number of Sequences: 28952
Number of extensions: 262857
Number of successful extensions: 820
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 927799552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -