Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00248
         (771 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   4.7  
AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash pro...    22   4.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.7  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 266 ICTLLDMGPQRPNLDEFIPK 325
           IC     G QRP   +F+P+
Sbjct: 26  ICYYASWGAQRPGNGQFVPE 45


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 245  VMKPHETVSIVDPLFYE 195
            ++KPH+T +  D  FYE
Sbjct: 1868 IIKPHDTWADFDNKFYE 1884


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -1

Query: 369 ARFKPSNSTKQDGSS---LGMNSSRLGR*GPMSSSVQMPSTQVFCHEAP*NSQ 220
           AR    +++  DG+S   +   SS L   GP++  V+ P T     +AP + Q
Sbjct: 54  ARSNADSTSHTDGASTPDVRPPSSSLSYGGPVNDDVRSPGTPGPLSQAPASQQ 106


>AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash
           protein protein.
          Length = 40

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 140 KQQLRIAVQDSYEDLKQHGPEF 75
           +++ R+ V + + +L+QH P F
Sbjct: 1   RERNRVKVNNGFANLRQHIPNF 22


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -1

Query: 369 ARFKPSNSTKQDGSS---LGMNSSRLGR*GPMSSSVQMPSTQVFCHEAP*NSQ 220
           AR    +++  DG+S   +   SS L   GP++  V+ P T     +AP + Q
Sbjct: 210 ARSNADSTSHTDGASTPDVRPPSSSLSYGGPVNDDVRSPGTPGPLSQAPASQQ 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,366
Number of Sequences: 336
Number of extensions: 3469
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)