Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00248
(771 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004887-1|AAO45243.1| 1049|Drosophila melanogaster GH01576p pro... 119 4e-27
AY061378-1|AAL28926.1| 702|Drosophila melanogaster LD30157p pro... 119 4e-27
AF132299-1|AAF63407.1| 1049|Drosophila melanogaster D-Importin 7... 119 4e-27
AE014296-1371|AAF50487.1| 1049|Drosophila melanogaster CG7935-PA... 119 4e-27
AF251145-1|AAF68970.1| 1049|Drosophila melanogaster Ran binding ... 116 4e-26
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE... 31 2.3
>BT004887-1|AAO45243.1| 1049|Drosophila melanogaster GH01576p
protein.
Length = 1049
Score = 119 bits (287), Expect = 4e-27
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +3
Query: 3 KIDNCLPSFVELVLNRLTRKVKTSELRTMLLQVLIAILYSNPQLLFSILDKLQEAVPNAS 182
+ID+ + FVEL L+RLTR+V++SELRTM LQV+IA LY NPQLL SILDK+ + N S
Sbjct: 751 QIDSVIHMFVELALSRLTREVQSSELRTMCLQVVIAALYYNPQLLLSILDKMSQQ-NNDS 809
Query: 183 ITQHFIKQWIHDTDCFMGLHDRKL 254
I+ HFIKQW+HDTDCF+G+HDRKL
Sbjct: 810 ISAHFIKQWLHDTDCFLGIHDRKL 833
Score = 55.2 bits (127), Expect = 9e-08
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 227 FHGAS*QKTCVLGICTLLDMGPQRPN-LDEFIPKLLPSCLVLFDGLKRAY 373
F G +K CVLG+CTL+ +G +P L E K++P+ ++LFDGLKRAY
Sbjct: 825 FLGIHDRKLCVLGLCTLISLGEAKPQVLSEVAGKIVPALILLFDGLKRAY 874
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 613 IECYTTPLDDRD--CPVDEYVKFKTTLSALSSTEPALYHALTSVLSEDQKK 759
+E +TTP+DD + +DEY FK ++ALS+ + A Y LTS L+ +Q K
Sbjct: 957 LESFTTPIDDEENESAIDEYWTFKEVITALSAQDQAWYALLTSNLTPEQAK 1007
>AY061378-1|AAL28926.1| 702|Drosophila melanogaster LD30157p
protein.
Length = 702
Score = 119 bits (287), Expect = 4e-27
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +3
Query: 3 KIDNCLPSFVELVLNRLTRKVKTSELRTMLLQVLIAILYSNPQLLFSILDKLQEAVPNAS 182
+ID+ + FVEL L+RLTR+V++SELRTM LQV+IA LY NPQLL SILDK+ + N S
Sbjct: 404 QIDSVIHMFVELALSRLTREVQSSELRTMCLQVVIAALYYNPQLLLSILDKMSQQ-NNDS 462
Query: 183 ITQHFIKQWIHDTDCFMGLHDRKL 254
I+ HFIKQW+HDTDCF+G+HDRKL
Sbjct: 463 ISAHFIKQWLHDTDCFLGIHDRKL 486
Score = 55.2 bits (127), Expect = 9e-08
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 227 FHGAS*QKTCVLGICTLLDMGPQRPN-LDEFIPKLLPSCLVLFDGLKRAY 373
F G +K CVLG+CTL+ +G +P L E K++P+ ++LFDGLKRAY
Sbjct: 478 FLGIHDRKLCVLGLCTLISLGEAKPQVLSEVAGKIVPALILLFDGLKRAY 527
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 613 IECYTTPLDDRD--CPVDEYVKFKTTLSALSSTEPALYHALTSVLSEDQKK 759
+E +TTP+DD + +DEY FK ++ALS+ + A Y LTS L+ +Q K
Sbjct: 610 LESFTTPIDDEENESAIDEYWTFKEVITALSAQDQAWYALLTSNLTPEQAK 660
>AF132299-1|AAF63407.1| 1049|Drosophila melanogaster D-Importin
7/RanBP7 protein.
Length = 1049
Score = 119 bits (287), Expect = 4e-27
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +3
Query: 3 KIDNCLPSFVELVLNRLTRKVKTSELRTMLLQVLIAILYSNPQLLFSILDKLQEAVPNAS 182
+ID+ + FVEL L+RLTR+V++SELRTM LQV+IA LY NPQLL SILDK+ + N S
Sbjct: 751 QIDSVIHMFVELALSRLTREVQSSELRTMCLQVVIAALYYNPQLLLSILDKMSQQ-NNDS 809
Query: 183 ITQHFIKQWIHDTDCFMGLHDRKL 254
I+ HFIKQW+HDTDCF+G+HDRKL
Sbjct: 810 ISAHFIKQWLHDTDCFLGIHDRKL 833
Score = 55.2 bits (127), Expect = 9e-08
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 227 FHGAS*QKTCVLGICTLLDMGPQRPN-LDEFIPKLLPSCLVLFDGLKRAY 373
F G +K CVLG+CTL+ +G +P L E K++P+ ++LFDGLKRAY
Sbjct: 825 FLGIHDRKLCVLGLCTLISLGEAKPQVLSEVAGKIVPALILLFDGLKRAY 874
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 613 IECYTTPLDDRD--CPVDEYVKFKTTLSALSSTEPALYHALTSVLSEDQKK 759
+E +TTP+DD + +DEY FK ++ALS+ + A Y LTS L+ +Q K
Sbjct: 957 LESFTTPIDDEENESAIDEYWTFKEVITALSAQDQAWYALLTSNLTPEQAK 1007
>AE014296-1371|AAF50487.1| 1049|Drosophila melanogaster CG7935-PA
protein.
Length = 1049
Score = 119 bits (287), Expect = 4e-27
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +3
Query: 3 KIDNCLPSFVELVLNRLTRKVKTSELRTMLLQVLIAILYSNPQLLFSILDKLQEAVPNAS 182
+ID+ + FVEL L+RLTR+V++SELRTM LQV+IA LY NPQLL SILDK+ + N S
Sbjct: 751 QIDSVIHMFVELALSRLTREVQSSELRTMCLQVVIAALYYNPQLLLSILDKMSQQ-NNDS 809
Query: 183 ITQHFIKQWIHDTDCFMGLHDRKL 254
I+ HFIKQW+HDTDCF+G+HDRKL
Sbjct: 810 ISAHFIKQWLHDTDCFLGIHDRKL 833
Score = 55.2 bits (127), Expect = 9e-08
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 227 FHGAS*QKTCVLGICTLLDMGPQRPN-LDEFIPKLLPSCLVLFDGLKRAY 373
F G +K CVLG+CTL+ +G +P L E K++P+ ++LFDGLKRAY
Sbjct: 825 FLGIHDRKLCVLGLCTLISLGEAKPQVLSEVAGKIVPALILLFDGLKRAY 874
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 613 IECYTTPLDDRD--CPVDEYVKFKTTLSALSSTEPALYHALTSVLSEDQKK 759
+E +TTP+DD + +DEY FK ++ALS+ + A Y LTS L+ +Q K
Sbjct: 957 LESFTTPIDDEENESAIDEYWTFKEVITALSAQDQAWYALLTSNLTPEQAK 1007
>AF251145-1|AAF68970.1| 1049|Drosophila melanogaster Ran binding
protein 7 protein.
Length = 1049
Score = 116 bits (279), Expect = 4e-26
Identities = 55/84 (65%), Positives = 69/84 (82%)
Frame = +3
Query: 3 KIDNCLPSFVELVLNRLTRKVKTSELRTMLLQVLIAILYSNPQLLFSILDKLQEAVPNAS 182
+ID+ + FVEL L+RLTR+V++SELRTM LQV+IA LY NPQLL SILDK+ + N S
Sbjct: 751 QIDSVIHMFVELALSRLTREVQSSELRTMCLQVVIAALYYNPQLLLSILDKMSQQ-NNDS 809
Query: 183 ITQHFIKQWIHDTDCFMGLHDRKL 254
I+ HFIKQW+HDTDCF+G+HD KL
Sbjct: 810 ISAHFIKQWLHDTDCFLGIHDCKL 833
Score = 53.6 bits (123), Expect = 3e-07
Identities = 23/43 (53%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = +2
Query: 248 KTCVLGICTLLDMGPQRPN-LDEFIPKLLPSCLVLFDGLKRAY 373
K CVLG+CTL+ +G +P L E K++P+ ++LFDGLKRAY
Sbjct: 832 KLCVLGLCTLISLGEAKPQVLSEVAGKIVPALILLFDGLKRAY 874
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 613 IECYTTPLDDRD--CPVDEYVKFKTTLSALSSTEPALYHALTSVLSEDQKK 759
+E +TTP+DD + +DEY FK ++ALS+ + A Y LTS L+ +Q K
Sbjct: 957 LESFTTPIDDEENESAIDEYWTFKEVITALSAQDQAWYALLTSNLTPEQAK 1007
>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
isoform E protein.
Length = 9606
Score = 30.7 bits (66), Expect = 2.3
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +1
Query: 517 TSNQQGVEMTAKIXXXXXXXXXXXXXXXXXAAIECYTTPLDDRDCPVDEYVKF-KTTLSA 693
T N + ++ TA+ AIE T P+DD +DE VK + T +
Sbjct: 2432 TENVESLQRTAESNENSVIEVVELSKSEVPEAIELKTAPVDDHVSKLDELVKIPEATPTV 2491
Query: 694 LSSTEPALYHALTSVLSED-QKK 759
L + PA L ED QKK
Sbjct: 2492 LPESNPAELSPEEQKLFEDIQKK 2514
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,343,434
Number of Sequences: 53049
Number of extensions: 700939
Number of successful extensions: 1806
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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