Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00245
(488 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 150 1e-37
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 146 1e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 135 4e-33
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 134 7e-33
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 129 2e-31
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 76 3e-15
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 71 7e-14
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 53 3e-08
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.28
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 27 1.1
SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 26 3.5
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 4.6
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb... 25 4.6
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 25 6.1
SPBC16G5.08 |trp4||phosphoribosylanthranilate transferase Trp4|S... 25 6.1
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 25 8.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 8.1
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 25 8.1
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 150 bits (363), Expect = 1e-37
Identities = 71/83 (85%), Positives = 78/83 (93%)
Frame = +2
Query: 5 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 184
+AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDL
Sbjct: 139 DAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDL 198
Query: 185 GGGTFDVSILTIEDGIFEVKSTA 253
GGGTFDVS+LTIE+GIFEVK+TA
Sbjct: 199 GGGTFDVSLLTIEEGIFEVKATA 221
Score = 143 bits (347), Expect = 1e-35
Identities = 67/77 (87%), Positives = 72/77 (93%)
Frame = +1
Query: 256 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI 435
DTHLGGEDFD+R+VNHF+QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEI
Sbjct: 223 DTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEI 282
Query: 436 DSLFEGIDFYTSITRAR 486
DSLFEGIDFYTSITRAR
Sbjct: 283 DSLFEGIDFYTSITRAR 299
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 146 bits (355), Expect = 1e-36
Identities = 70/83 (84%), Positives = 77/83 (92%)
Frame = +2
Query: 5 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 184
+AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDL
Sbjct: 139 DAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDL 198
Query: 185 GGGTFDVSILTIEDGIFEVKSTA 253
GGGTFDVS+LTIE+GIFEVK+TA
Sbjct: 199 GGGTFDVSLLTIEEGIFEVKATA 221
Score = 141 bits (341), Expect = 6e-35
Identities = 66/77 (85%), Positives = 71/77 (92%)
Frame = +1
Query: 256 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI 435
DTHLGGEDFD+R+VNHF QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEI
Sbjct: 223 DTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEI 282
Query: 436 DSLFEGIDFYTSITRAR 486
DSL+EGIDFYTSITRAR
Sbjct: 283 DSLYEGIDFYTSITRAR 299
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 135 bits (326), Expect = 4e-33
Identities = 65/84 (77%), Positives = 73/84 (86%)
Frame = +2
Query: 2 QNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 181
+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFD
Sbjct: 142 EKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFD 201
Query: 182 LGGGTFDVSILTIEDGIFEVKSTA 253
LGGGTFDVS+L I+ G+FEV +TA
Sbjct: 202 LGGGTFDVSLLKIQGGVFEVLATA 225
Score = 120 bits (288), Expect = 2e-28
Identities = 55/77 (71%), Positives = 65/77 (84%)
Frame = +1
Query: 256 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI 435
DTHLGGEDFDN +V HF+QEFKRK K D++ + RALRRLR+ACERAKR LSS TQ ++E+
Sbjct: 227 DTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEV 286
Query: 436 DSLFEGIDFYTSITRAR 486
DSL GIDF +SITRAR
Sbjct: 287 DSLSNGIDFSSSITRAR 303
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 134 bits (324), Expect = 7e-33
Identities = 60/83 (72%), Positives = 79/83 (95%)
Frame = +2
Query: 5 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 184
+AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DL
Sbjct: 172 HAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDL 230
Query: 185 GGGTFDVSILTIEDGIFEVKSTA 253
GGGTFDVS+L+I++G+FEV +T+
Sbjct: 231 GGGTFDVSLLSIDNGVFEVLATS 253
Score = 82.2 bits (194), Expect = 4e-17
Identities = 36/77 (46%), Positives = 53/77 (68%)
Frame = +1
Query: 256 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI 435
DTHLGGEDFDNR++N+ + + RK D+ + +A+ +L+ E+AKRTLSS IEI
Sbjct: 255 DTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEI 314
Query: 436 DSLFEGIDFYTSITRAR 486
+S F G DF +++RA+
Sbjct: 315 ESFFNGQDFSETLSRAK 331
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 129 bits (312), Expect = 2e-31
Identities = 60/83 (72%), Positives = 73/83 (87%)
Frame = +2
Query: 2 QNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 181
+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FD
Sbjct: 184 KNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFD 241
Query: 182 LGGGTFDVSILTIEDGIFEVKST 250
LGGGTFD+SIL + +G+FEV+ST
Sbjct: 242 LGGGTFDISILELNNGVFEVRST 264
Score = 61.3 bits (142), Expect = 8e-11
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +1
Query: 256 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI 435
DTHLGGEDFD +V H V+ FK+ DL+ ++ A++R+R A E+AK LSS ++ I +
Sbjct: 267 DTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISL 326
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 75.8 bits (178), Expect = 3e-15
Identities = 37/77 (48%), Positives = 50/77 (64%)
Frame = +1
Query: 256 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI 435
D +LGGE + +VN F +EF++K D N R+L +LR CE KR LS+ T AS +
Sbjct: 249 DENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGTTASAAV 308
Query: 436 DSLFEGIDFYTSITRAR 486
DSL +GIDF++SI R R
Sbjct: 309 DSLADGIDFHSSINRLR 325
Score = 54.4 bits (125), Expect = 9e-09
Identities = 23/77 (29%), Positives = 49/77 (63%)
Frame = +2
Query: 11 VITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGG 190
V++VP YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ + G
Sbjct: 167 VMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGA 226
Query: 191 GTFDVSILTIEDGIFEV 241
+VS+++++ G+ +
Sbjct: 227 TRSEVSVVSVKGGLMTI 243
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 71.3 bits (167), Expect = 7e-14
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +2
Query: 5 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVL 172
+ VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V
Sbjct: 143 DVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVA 202
Query: 173 IFDLGGGTFDVSILTIEDGIFEVKST 250
I D G + VSI+ G F +KST
Sbjct: 203 IVDFGHSNYSVSIVEFSRGQFHIKST 228
Score = 64.1 bits (149), Expect = 1e-11
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +1
Query: 229 YLRGEIHRRDT----HLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 396
+ RG+ H + T +LG + D ++++F EFK KYK D+ +N +A RL TA ER K
Sbjct: 218 FSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLK 277
Query: 397 RTLSSSTQASIEIDSLFEGIDFYTSITRA 483
+ LS++ A + ++ + ID + I R+
Sbjct: 278 KVLSANANAPLNVEMIMNDIDASSFIKRS 306
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 52.8 bits (121), Expect = 3e-08
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +1
Query: 265 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 444
L G + + +++ F +K+ DL+ N RAL RL R K LS++++A I+ L
Sbjct: 262 LSGNEINRKLIGFMKNSFYQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEEL 321
Query: 445 FEGIDFYTSITRA 483
+GIDF ITR+
Sbjct: 322 ADGIDFRLKITRS 334
Score = 46.0 bits (104), Expect = 3e-06
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 11 VITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLIFDLG 187
V+TVP +FN+ QR +A I +VL +I++ A AI Y L + T +I+D G
Sbjct: 164 VLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSG 223
Query: 188 GGTFDVSILTIE 223
G+ ++++ +
Sbjct: 224 SGSTSATVISFD 235
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.28
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 326 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 451
N K+ LP E + + + V G GP H+PH R LR + LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 27.5 bits (58), Expect = 1.1
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 137 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAATPTWEVRT 280
LDK G+ I GG T SIL +GI VK + W T
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYET 95
>SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 25.8 bits (54), Expect = 3.5
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 134 GLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAATPTWEVRTLTIA 292
G + K TG++ LI DL + I++ G ++ A W++ IA
Sbjct: 309 GPNTKFTGDKKQLIDDLEDALYASKIISYAQGFMLMREAAKEYGWKLNNAGIA 361
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 4.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 292 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 429
+++ F EFK++ K D + L+ L + C R R SS SI
Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI 756
>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 657
Score = 25.4 bits (53), Expect = 4.6
Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 155 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAATPT-WEVRTLTIAWSTTLSRSSRGNT 331
GE L+ + G F+ + E + E + WE + W T LSR+ + +
Sbjct: 277 GESRNLLQTMLAGIFNADLEHSESTMVETDAEFEDDAKWETMRKALQWFTQLSRTEQDDV 336
Query: 332 KRTSLPTRELLGVCVL 379
+ S+ + + +L
Sbjct: 337 RSQSINKELNITIAIL 352
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 6.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 436 LSQCSLVWTMTRSSLPSHMQYANA 365
+S C ++WTM+ P HM A
Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETA 288
>SPBC16G5.08 |trp4||phosphoribosylanthranilate transferase
Trp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 354
Score = 25.0 bits (52), Expect = 6.1
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 110 PTAAAIAYGLDKKGTGERNV-LIFDLGGGTFDVSILTIEDGIFEVKSTAATPTWEVRTLT 286
PT A I G+ K GE + LG G ++ E+G+ E+ T TW VR T
Sbjct: 200 PTYARII-GVSKLSLGEVVAKTLLKLGAGRS--LVVCGEEGLDEISPAGPTHTWLVRDGT 256
Query: 287 I 289
I
Sbjct: 257 I 257
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 24.6 bits (51), Expect = 8.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 285 QSHGQPLCPGVQEEIQKGPRYQQESS 362
QS G PL PG + GP + SS
Sbjct: 599 QSIGDPLPPGAMANVSAGPSSVRSSS 624
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 24.6 bits (51), Expect = 8.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 192 PPPRSKISTFRSPVPFLS 139
PPPRS ST R P P S
Sbjct: 364 PPPRSAPSTGRQPPPLSS 381
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 24.6 bits (51), Expect = 8.1
Identities = 23/87 (26%), Positives = 33/87 (37%)
Frame = -3
Query: 366 PKSSLVGSEVLFVFPLELLDKVVDHAIVKVLTSQVGVAAVDFTSKIPSSMVRIDTSKVPP 187
P +SL+ S V+ E + V V TS G V +TS + + P
Sbjct: 79 PSASLLSSSVVLYSAKETV--TVSSYWSLVSTSVTGTVYVPYTSSVACFPYATSDAPNPI 136
Query: 186 PRSKISTFRSPVPFLSRP*AIAAAVGS 106
PR +T S P S + A + S
Sbjct: 137 PRGDSATSTSIAPTYSASDSSATTITS 163
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,056,083
Number of Sequences: 5004
Number of extensions: 40301
Number of successful extensions: 157
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 190087364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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