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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00244
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    25   1.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   4.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   7.1  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   9.3  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   9.3  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   9.3  

>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 540 IRMKPNCLPSKFDCRADRKRKFTHSE 617
           + M+P C+  ++ C   RK K    E
Sbjct: 47  VGMRPECMVPEYQCAVKRKEKKAQKE 72


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +3

Query: 540 IRMKPNCLPSKFDCRADRKRKFTHSE 617
           + M+P C+  ++ C   RK +    E
Sbjct: 250 VGMRPECVVPEYQCAVKRKEEKAQKE 275


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 136 FYIRTIENEYLRVIKDEKIL 77
           F   TI N YL + KD+ IL
Sbjct: 133 FQTMTIPNHYLWLYKDKTIL 152


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 451 LHSDRYIGGWKKCI 410
           LHSDR +  + KC+
Sbjct: 38  LHSDRLLNNYFKCL 51


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 451 LHSDRYIGGWKKCI 410
           LHSDR +  + KC+
Sbjct: 38  LHSDRLLNNYFKCL 51


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 451 LHSDRYIGGWKKCI 410
           LHSDR +  + KC+
Sbjct: 38  LHSDRLLNNYFKCL 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,733
Number of Sequences: 438
Number of extensions: 3684
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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