BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00243 (703 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY118624-1|AAM49993.1| 648|Drosophila melanogaster RE22492p pro... 31 1.5 AE014297-435|AAF51890.3| 648|Drosophila melanogaster CG15598-PA... 31 1.5 AE014296-1827|AAF50151.1| 196|Drosophila melanogaster CG14151-P... 30 3.5 BT003215-1|AAO24970.1| 1020|Drosophila melanogaster RE13301p pro... 29 4.6 AE013599-3163|AAO41341.1| 1069|Drosophila melanogaster CG18375-P... 29 4.6 AE013599-3162|AAF46699.3| 1020|Drosophila melanogaster CG18375-P... 29 4.6 AF220179-1|AAG28590.1| 195|Drosophila melanogaster fruitless ty... 29 8.1 AE014297-2540|AAN13777.1| 665|Drosophila melanogaster CG14307-P... 29 8.1 >AY118624-1|AAM49993.1| 648|Drosophila melanogaster RE22492p protein. Length = 648 Score = 31.1 bits (67), Expect = 1.5 Identities = 16/56 (28%), Positives = 26/56 (46%) Frame = -3 Query: 455 CSPITQAMLTSNHAAFITVIRSTTSVPLMRGVSEDCRAGKVLVSAPM*VVRVNNSP 288 C P++ A TS H F+ +I S G + + R G+ L + P+ V + P Sbjct: 30 CHPVSMARSTSGHLIFLLLICLINSAAKADGTARNGRLGRHLSTTPLSHPTVESQP 85 >AE014297-435|AAF51890.3| 648|Drosophila melanogaster CG15598-PA protein. Length = 648 Score = 31.1 bits (67), Expect = 1.5 Identities = 16/56 (28%), Positives = 26/56 (46%) Frame = -3 Query: 455 CSPITQAMLTSNHAAFITVIRSTTSVPLMRGVSEDCRAGKVLVSAPM*VVRVNNSP 288 C P++ A TS H F+ +I S G + + R G+ L + P+ V + P Sbjct: 30 CHPVSMARSTSGHLIFLLLICLINSAAKADGTARNGRLGRHLSTTPLSHPTVESQP 85 >AE014296-1827|AAF50151.1| 196|Drosophila melanogaster CG14151-PA protein. Length = 196 Score = 29.9 bits (64), Expect = 3.5 Identities = 10/40 (25%), Positives = 24/40 (60%) Frame = +1 Query: 376 GTEVVLLMTVINAAWLLVNIACVIGLHRRRPGNIKFYVLF 495 G L+ + W+++ I + G++RR+ G ++F+++F Sbjct: 39 GHWTALVALIFTIFWMVIIIVLMAGIYRRKLGLVRFWLVF 78 >BT003215-1|AAO24970.1| 1020|Drosophila melanogaster RE13301p protein. Length = 1020 Score = 29.5 bits (63), Expect = 4.6 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 306 QSKQQPGIADIGEHGQVTRMKQQIL 232 Q +QQ +++G+HG V +KQQ+L Sbjct: 289 QQQQQQSASNLGKHGGVAALKQQLL 313 >AE013599-3163|AAO41341.1| 1069|Drosophila melanogaster CG18375-PB, isoform B protein. Length = 1069 Score = 29.5 bits (63), Expect = 4.6 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 306 QSKQQPGIADIGEHGQVTRMKQQIL 232 Q +QQ +++G+HG V +KQQ+L Sbjct: 338 QQQQQQSASNLGKHGGVAALKQQLL 362 >AE013599-3162|AAF46699.3| 1020|Drosophila melanogaster CG18375-PA, isoform A protein. Length = 1020 Score = 29.5 bits (63), Expect = 4.6 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 306 QSKQQPGIADIGEHGQVTRMKQQIL 232 Q +QQ +++G+HG V +KQQ+L Sbjct: 289 QQQQQQSASNLGKHGGVAALKQQLL 313 >AF220179-1|AAG28590.1| 195|Drosophila melanogaster fruitless type-C protein. Length = 195 Score = 28.7 bits (61), Expect = 8.1 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Frame = -1 Query: 367 GASPRTAGRVRYWYQLQCKW---SE*TTARYCRHW*TWSG 257 G S R +GR R + Q +W E +CRH WSG Sbjct: 84 GGSSRKSGRFRANWLYQFEWLQYDERANTMFCRHCRKWSG 123 >AE014297-2540|AAN13777.1| 665|Drosophila melanogaster CG14307-PD, isoform D protein. Length = 665 Score = 28.7 bits (61), Expect = 8.1 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Frame = -1 Query: 367 GASPRTAGRVRYWYQLQCKW---SE*TTARYCRHW*TWSG 257 G S R +GR R + Q +W E +CRH WSG Sbjct: 554 GGSSRKSGRFRANWLYQFEWLQYDERANTMFCRHCRKWSG 593 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 32,647,224 Number of Sequences: 53049 Number of extensions: 676750 Number of successful extensions: 1334 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1289 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1334 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3087795150 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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