Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00243
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118624-1|AAM49993.1|  648|Drosophila melanogaster RE22492p pro...    31   1.5  
AE014297-435|AAF51890.3|  648|Drosophila melanogaster CG15598-PA...    31   1.5  
AE014296-1827|AAF50151.1|  196|Drosophila melanogaster CG14151-P...    30   3.5  
BT003215-1|AAO24970.1| 1020|Drosophila melanogaster RE13301p pro...    29   4.6  
AE013599-3163|AAO41341.1| 1069|Drosophila melanogaster CG18375-P...    29   4.6  
AE013599-3162|AAF46699.3| 1020|Drosophila melanogaster CG18375-P...    29   4.6  
AF220179-1|AAG28590.1|  195|Drosophila melanogaster fruitless ty...    29   8.1  
AE014297-2540|AAN13777.1|  665|Drosophila melanogaster CG14307-P...    29   8.1  

>AY118624-1|AAM49993.1|  648|Drosophila melanogaster RE22492p
           protein.
          Length = 648

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -3

Query: 455 CSPITQAMLTSNHAAFITVIRSTTSVPLMRGVSEDCRAGKVLVSAPM*VVRVNNSP 288
           C P++ A  TS H  F+ +I    S     G + + R G+ L + P+    V + P
Sbjct: 30  CHPVSMARSTSGHLIFLLLICLINSAAKADGTARNGRLGRHLSTTPLSHPTVESQP 85


>AE014297-435|AAF51890.3|  648|Drosophila melanogaster CG15598-PA
           protein.
          Length = 648

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -3

Query: 455 CSPITQAMLTSNHAAFITVIRSTTSVPLMRGVSEDCRAGKVLVSAPM*VVRVNNSP 288
           C P++ A  TS H  F+ +I    S     G + + R G+ L + P+    V + P
Sbjct: 30  CHPVSMARSTSGHLIFLLLICLINSAAKADGTARNGRLGRHLSTTPLSHPTVESQP 85


>AE014296-1827|AAF50151.1|  196|Drosophila melanogaster CG14151-PA
           protein.
          Length = 196

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 10/40 (25%), Positives = 24/40 (60%)
 Frame = +1

Query: 376 GTEVVLLMTVINAAWLLVNIACVIGLHRRRPGNIKFYVLF 495
           G    L+  +    W+++ I  + G++RR+ G ++F+++F
Sbjct: 39  GHWTALVALIFTIFWMVIIIVLMAGIYRRKLGLVRFWLVF 78


>BT003215-1|AAO24970.1| 1020|Drosophila melanogaster RE13301p
           protein.
          Length = 1020

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 306 QSKQQPGIADIGEHGQVTRMKQQIL 232
           Q +QQ   +++G+HG V  +KQQ+L
Sbjct: 289 QQQQQQSASNLGKHGGVAALKQQLL 313


>AE013599-3163|AAO41341.1| 1069|Drosophila melanogaster CG18375-PB,
           isoform B protein.
          Length = 1069

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 306 QSKQQPGIADIGEHGQVTRMKQQIL 232
           Q +QQ   +++G+HG V  +KQQ+L
Sbjct: 338 QQQQQQSASNLGKHGGVAALKQQLL 362


>AE013599-3162|AAF46699.3| 1020|Drosophila melanogaster CG18375-PA,
           isoform A protein.
          Length = 1020

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 306 QSKQQPGIADIGEHGQVTRMKQQIL 232
           Q +QQ   +++G+HG V  +KQQ+L
Sbjct: 289 QQQQQQSASNLGKHGGVAALKQQLL 313


>AF220179-1|AAG28590.1|  195|Drosophila melanogaster fruitless
           type-C protein.
          Length = 195

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = -1

Query: 367 GASPRTAGRVRYWYQLQCKW---SE*TTARYCRHW*TWSG 257
           G S R +GR R  +  Q +W    E     +CRH   WSG
Sbjct: 84  GGSSRKSGRFRANWLYQFEWLQYDERANTMFCRHCRKWSG 123


>AE014297-2540|AAN13777.1|  665|Drosophila melanogaster CG14307-PD,
           isoform D protein.
          Length = 665

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = -1

Query: 367 GASPRTAGRVRYWYQLQCKW---SE*TTARYCRHW*TWSG 257
           G S R +GR R  +  Q +W    E     +CRH   WSG
Sbjct: 554 GGSSRKSGRFRANWLYQFEWLQYDERANTMFCRHCRKWSG 593


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,647,224
Number of Sequences: 53049
Number of extensions: 676750
Number of successful extensions: 1334
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)