Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00242
         (761 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    26   1.5  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    25   2.5  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   5.9  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   7.8  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 93  MPDLDSSVPTTGYDNGVGM 37
           +PD D S P+ GY N + M
Sbjct: 367 LPDYDDSTPSNGYTNEIEM 385


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 216 GSERWQTPPHLRPNDIITALCFSPNRYWLCAA 311
           G  +WQT P  R N ++T+   +      CA+
Sbjct: 404 GQRKWQTGPMRRVNTMLTSQMLNQTTSLCCAS 435


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 234 TPPHLRPNDI 263
           TPPH RP+DI
Sbjct: 519 TPPHCRPSDI 528


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 115 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 210
           INH G++   N        SL  +GG+  + M
Sbjct: 63  INHQGNAASANVAVADRQQSLILAGGRRQRIM 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,219
Number of Sequences: 2352
Number of extensions: 17361
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)