Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00241
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               25   0.92 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   4.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   6.5  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 452 STGKCSSKSSYILCENM*LNPESDDTGEQT 363
           ST KC +  ++I+C +  L+   +DT E T
Sbjct: 124 STDKCENGLNFIICFSKLLSDMYEDTFEDT 153


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 187 DDSRLFSGRQRLRKTQLRINATPLVTQSRF 98
           +   LFS +Q+ +   +++  TP V  SRF
Sbjct: 510 ETKELFSSQQKTKNNLMKLETTP-VLPSRF 538


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/35 (20%), Positives = 21/35 (60%)
 Frame = +1

Query: 379 SSLSGFNYMFSQSMYEDLEEHLPVEIRPEWFLRNY 483
           +++ G +Y  +   ++D++  LP+++  +  +R Y
Sbjct: 659 ANIEGTSYFLNDYKHKDVDVTLPLDLHIQNAIREY 693


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 549 KSHILATCSC*LKVHLTALRFEIISQKPFRT 457
           ++H+ +TCS     H   LRF +  ++   T
Sbjct: 342 RNHLNSTCSVTNSPHQKKLRFHLAKERKAST 372


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,045
Number of Sequences: 438
Number of extensions: 4742
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)