Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00240
(838 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.6
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 23 3.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.5
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 6.1
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 6.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 6.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.1
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 22 8.1
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 722 PGNVSTLNIHFIFVQNLSFFWIVIVECLKVHKATLN 829
PGN+ L+IH F+++L ++ + +K A+ N
Sbjct: 570 PGNLKWLDIHGNFIESLGNYYKIRDSKVKTLDASHN 605
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +3
Query: 63 WLTAARSSKTIAFHLKTGQNSNLRLRSVRCRCWKSTASSTLRAPPSAGTSVASTGSPGP 239
WL S+ + ++ +S+ C+C+ ++TLR S G+ +A P
Sbjct: 49 WLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTLRR-GSDGSQLAMRNDRSP 106
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +3
Query: 63 WLTAARSSKTIAFHLKTGQNSNLRLRSVRCRCWKSTASSTLRAPPSAGTSVASTGSPGP 239
WL S+ + ++ +S+ C+C+ ++TLR S G+ +A P
Sbjct: 497 WLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTLRR-GSDGSQLAMRNDRSP 554
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 22.2 bits (45), Expect = 6.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 25 PRQGPRREPEAAAGLRRP 78
P RREPEA G RP
Sbjct: 112 PHPRLRREPEAEPGNNRP 129
Score = 22.2 bits (45), Expect = 6.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 25 PRQGPRREPEAAAGLRRP 78
P RREPEA G RP
Sbjct: 138 PHPRLRREPEAEPGNNRP 155
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 6.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 207 TSVASTGSPGPMTRR 251
TSV ST SP P RR
Sbjct: 409 TSVNSTSSPKPFPRR 423
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 6.1
Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Frame = +3
Query: 234 GPMTRRPRDRPERGVPER--HSRQC 302
GPM+ R GVPE+ H C
Sbjct: 1066 GPMSEERRQHTAEGVPEQPPHDTTC 1090
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 484 GSRTCRRTQSRPRSTCQARYDR 419
G R+C R +SR RYD+
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQ 270
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 484 GSRTCRRTQSRPRSTCQARYDR 419
G R+C R +SR RYD+
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQ 270
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 484 GSRTCRRTQSRPRSTCQARYDR 419
G R+C R +SR RYD+
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQ 270
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 484 GSRTCRRTQSRPRSTCQARYDR 419
G R+C R +SR RYD+
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQ 270
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 484 GSRTCRRTQSRPRSTCQARYDR 419
G R+C R +SR RYD+
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQ 270
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 484 GSRTCRRTQSRPRSTCQARYDR 419
G R+C R +SR RYD+
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQ 270
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 484 GSRTCRRTQSRPRSTCQARYDR 419
G R+C R +SR RYD+
Sbjct: 249 GERSCSRDRSREYKKKDRRYDQ 270
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 116 PEFKPKTPFGQMPVLEIDGK 175
P KP+TPF +L ++ K
Sbjct: 8 PNRKPRTPFTTQQLLSLEKK 27
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,400
Number of Sequences: 438
Number of extensions: 4571
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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