Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00240
(838 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g17220.1 68418.m02018 glutathione S-transferase, putative 39 0.005
At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative / ... 36 0.025
At2g30870.1 68415.m03762 glutathione S-transferase, putative sup... 36 0.044
At3g03190.1 68416.m00315 glutathione S-transferase, putative ide... 35 0.058
At1g75270.1 68414.m08744 dehydroascorbate reductase, putative si... 33 0.31
At4g02520.1 68417.m00345 glutathione S-transferase, putative 32 0.41
At2g02930.1 68415.m00241 glutathione S-transferase, putative 32 0.41
At1g49860.1 68414.m05590 glutathione S-transferase, putative sim... 32 0.41
At5g67385.1 68418.m08497 phototropic-responsive protein, putativ... 31 0.72
At4g22300.1 68417.m03225 phospholipase/carboxylesterase family p... 31 0.72
At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative / ... 31 0.72
At3g12970.1 68416.m01616 expressed protein 31 0.95
At5g41220.1 68418.m05009 glutathione S-transferase, putative sim... 31 1.3
At3g62760.1 68416.m07050 glutathione S-transferase, putative Glu... 31 1.3
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 30 2.2
At2g47730.1 68415.m05960 glutathione S-transferase 6 (GST6) iden... 30 2.2
At1g56020.1 68414.m06431 expressed protein 30 2.2
At1g06160.1 68414.m00647 ethylene-responsive factor, putative si... 29 3.8
At1g29880.1 68414.m03652 glycyl-tRNA synthetase / glycine--tRNA ... 29 5.1
At1g02940.1 68414.m00261 glutathione S-transferase, putative sim... 29 5.1
At5g41240.1 68418.m05011 glutathione S-transferase, putative sim... 28 6.7
At4g38600.1 68417.m05464 HECT-domain-containing protein / ubiqui... 28 6.7
At1g68930.1 68414.m07889 pentatricopeptide (PPR) repeat-containi... 28 6.7
At1g19570.1 68414.m02437 dehydroascorbate reductase, putative si... 28 6.7
At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1... 28 8.8
At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1... 28 8.8
At1g06760.1 68414.m00718 histone H1, putative similar to histone... 28 8.8
>At5g17220.1 68418.m02018 glutathione S-transferase, putative
Length = 214
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +2
Query: 50 QRLLLAY--GGQEFEDNRISSENWPEFKP----KTPFGQMPVLEIDGKQYAQSTAICRYL 211
QR+LL + G EFE I + + + KP + PFGQ+P +E + +S AI RY
Sbjct: 15 QRVLLCFLEKGIEFEIIHIDLDTFEQKKPEHLLRQPFGQVPAIEDGDFKLFESRAIARYY 74
Query: 212 GRKYGLAGAN 241
K+ G N
Sbjct: 75 ATKFADQGTN 84
>At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative /
eEF-1B gamma, putative similar to elongation factor 1B
gamma GI:3868758 from [Oryza sativa]
Length = 413
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 116 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYG 226
PEF P G++PVLE +S AI RY+ RK G
Sbjct: 43 PEFLKMNPIGKVPVLETPEGPIFESNAIARYVSRKNG 79
>At2g30870.1 68415.m03762 glutathione S-transferase, putative
supported by cDNA GI:443698 GB:D17673
Length = 215
Score = 35.5 bits (78), Expect = 0.044
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 20 YFPVKALGESQRLLLAYGGQEFEDNRIS----SENWPEFKPKTPFGQMPVLEIDGK-QYA 184
Y P+ A + + L G FE + + PE+ PFG++PVL +DG +
Sbjct: 6 YAPLFASSKRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVL-VDGDYKIF 64
Query: 185 QSTAICRYLGRKYGLAG 235
+S AI RY+ KY G
Sbjct: 65 ESRAIMRYIAEKYRSQG 81
>At3g03190.1 68416.m00315 glutathione S-transferase, putative
identical to glutathione S-transferase GB:AAB09584 from
[Arabidopsis thaliana]
Length = 214
Score = 35.1 bits (77), Expect = 0.058
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 20 YFPVKALGESQRLLLAYGGQ--EFEDNRISSENWPEFKP----KTPFGQMPVLEIDGKQY 181
Y +KA QR+LL + + EFE + + + KP + PFGQ+P +E +
Sbjct: 6 YGQIKA-ANPQRVLLCFLEKDIEFEVIHVDLDKLEQKKPQHLLRQPFGQVPAIEDGYLKL 64
Query: 182 AQSTAICRYLGRKYGLAGAN 241
+S AI RY KY G +
Sbjct: 65 FESRAIARYYATKYADQGTD 84
>At1g75270.1 68414.m08744 dehydroascorbate reductase, putative
similar to GI:6939839 from [Oryza sativa]
Length = 213
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +2
Query: 47 SQRLLLAYGGQE--FEDNRISSENWPE-FKPKTPFGQMPVLEIDGKQYAQSTAICRYLGR 217
SQR+LL ++ ++ + I+ + P+ F +P G++PV+++DGK A S I L
Sbjct: 23 SQRVLLTLEEKKLPYKTHLINVSDKPQWFLDISPEGKVPVVKLDGKWVADSDVIVGLLEE 82
Query: 218 KY 223
KY
Sbjct: 83 KY 84
>At4g02520.1 68417.m00345 glutathione S-transferase, putative
Length = 212
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 122 FKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAGAN 241
F + PFGQ+P E + +S AI +Y+ +Y G N
Sbjct: 46 FLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTN 85
>At2g02930.1 68415.m00241 glutathione S-transferase, putative
Length = 212
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 122 FKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAGAN 241
F + PFGQ+P E + +S AI +Y+ +Y G N
Sbjct: 46 FLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTN 85
>At1g49860.1 68414.m05590 glutathione S-transferase, putative
similar to GI:860955 from [Hyoscyamus muticus] (Plant
Physiol. 109 (1), 253-260 (1995))
Length = 254
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 137 PFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAGAN 241
PFG++PVLE + + AI RYL +Y G N
Sbjct: 53 PFGEVPVLEDGDLKLFEPKAITRYLAEQYKDVGTN 87
>At5g67385.1 68418.m08497 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 663
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 129 LRLRSVRCRCWKSTASSTLRAPPSAGTSVASTGSPGPMTRR 251
++L+ K T+SST+ PS+ S ASTG P P+ R+
Sbjct: 586 MKLKEFEKESEKKTSSSTISTNPSSPISTASTGKP-PLPRK 625
>At4g22300.1 68417.m03225 phospholipase/carboxylesterase family
protein similar to acyl-protein thioesterase-1 [Homo
sapiens] GI:9965372; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 471
Score = 31.5 bits (68), Expect = 0.72
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 742 ERRNISWFHPDSPPNPYSPRF-TVLPVFFTL 653
E RN W P +PPNP S + V+P +F +
Sbjct: 315 EFRNTKWLFPSAPPNPVSCNYGAVMPSWFDI 345
>At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative /
eEF-1B gamma, putative Similar to elongation factor
1-gamma (gb|EF1G_XENLA). ESTs
gb|T20564,gb|T45940,gb|T04527 come from this gene
Length = 414
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 116 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYG 226
P F P G++PVLE +S AI RY+ R G
Sbjct: 43 PAFLKMNPIGKVPVLETPEGSVFESNAIARYVSRLNG 79
>At3g12970.1 68416.m01616 expressed protein
Length = 381
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 219 STGSPGPMTRRPRDRPERGVPERHSRQCRIGPL 317
S+ SPG T PR + G+P HS RI P+
Sbjct: 289 SSSSPGNFTGGPRMKLHHGMPRSHSANVRITPV 321
>At5g41220.1 68418.m05009 glutathione S-transferase, putative
similar to emb|CAA10662
Length = 590
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 116 PEFKPKTPFGQMPVLEIDGK-QYAQSTAICRYLGRKY 223
PEFK P G++P + +DGK + ++S AI YL Y
Sbjct: 43 PEFKDINPMGKVPAI-VDGKLKLSESHAILIYLSSAY 78
>At3g62760.1 68416.m07050 glutathione S-transferase, putative
Glutathione transferase III(b) - Zea mays, EMBL:AJ010296
Length = 219
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 116 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKY 223
P F PFG++P L+ D +S AI Y+ K+
Sbjct: 43 PSFLSMNPFGKVPALQDDDLTLFESRAITAYIAEKH 78
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = -3
Query: 251 PPRHWPRRARTCDRGTCRW----RCSERTACRRFPAPASDRT 138
PPRHWP R DR R+ SER+ RF +P R+
Sbjct: 438 PPRHWPDRRNFQDRNRDRYPSNRSYSERSPRGRFRSPPRRRS 479
>At2g47730.1 68415.m05960 glutathione S-transferase 6 (GST6)
identical to GB:X95295. Based on identical cDNA hits,
the translation is now 40 AAs longer at the N-terminal,
and start of exon2 is also corrected.
Length = 263
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 137 PFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAG 235
PFGQ+P LE +S AI +YL +Y G
Sbjct: 99 PFGQIPALEDGDLTLFESRAITQYLAEEYSEKG 131
>At1g56020.1 68414.m06431 expressed protein
Length = 398
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 219 STGSPGPMTRRPRDRPERGVPERHSRQCRIGPL 317
S+ SPG T PR + G+P +S RI P+
Sbjct: 306 SSSSPGSFTGGPRMKQHHGMPRSYSANVRITPV 338
>At1g06160.1 68414.m00647 ethylene-responsive factor, putative
similar to ethylene response factor 1 GB:AAD03544
GI:4128208 from [Arabidopsis thaliana]
Length = 244
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 162 KSTASSTLRAPPSAGTSVASTGSPGPMTRRPR 257
KS++SSTL + PS+ +S +S+ S ++ R R
Sbjct: 180 KSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSR 211
>At1g29880.1 68414.m03652 glycyl-tRNA synthetase / glycine--tRNA
ligase identical to SP|O23627 Glycyl-tRNA synthetase (EC
6.1.1.14) (Glycine--tRNA ligase) (GlyRS) {Arabidopsis
thaliana}
Length = 729
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 826 QSCFVNFQTFYYYNPKK 776
Q FVNF+ YYYN KK
Sbjct: 299 QGIFVNFKDLYYYNGKK 315
>At1g02940.1 68414.m00261 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]
Length = 256
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 116 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYL 211
P F PFGQ+PV G + +S AI Y+
Sbjct: 79 PSFLAINPFGQVPVFLDGGLKLTESRAISEYI 110
>At5g41240.1 68418.m05011 glutathione S-transferase, putative
similar to glutathione S-transferase, GST 10b
GB:CAA10662 [Arabidopsis thaliana] 37349.
Length = 591
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 116 PEFKPKTPFGQMPVLEIDGK-QYAQSTAICRYLGRKY 223
PEFK P G++P + +DG+ + +S AI YL Y
Sbjct: 43 PEFKEINPMGKVPAI-VDGRLKLFESHAILIYLSSAY 78
>At4g38600.1 68417.m05464 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12
(TRIP12) {Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1888
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 138 RSVRCRCWKSTASSTLRAPPSAGTSVASTGSPGPMTRRPRD 260
RS R R S++SS PPS+ T+ S S P D
Sbjct: 35 RSKRARLSSSSSSSLAPTPPSSSTTTRSRSSRSAAAAAPMD 75
>At1g68930.1 68414.m07889 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 743
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 406 LTKNNGHIALGKLTWGDFVYAGMYDYL 486
L+ +NGH++LGK G + G YL
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYL 174
>At1g19570.1 68414.m02437 dehydroascorbate reductase, putative
similar to GB:BAA90672 from (Oryza sativa)
Length = 213
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 47 SQRLLLAYGGQE--FEDNRISSENWPE-FKPKTPFGQMPVLEIDGKQYAQSTAICRYLGR 217
SQR LL + ++ + I+ + P+ F +P G++PVL+ID K S I L
Sbjct: 23 SQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEE 82
Query: 218 KY 223
KY
Sbjct: 83 KY 84
>At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 191
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +2
Query: 8 VKFYYFPVKALGESQRLLLAYGGQEFED---NRISSENWP-EFKPKTPFGQMPVLEIDGK 175
+K Y + + R+ LA G ++E N + + + +FK P G +P L +DG
Sbjct: 9 LKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPAL-VDGD 67
Query: 176 QYA-QSTAICRYLGRKY 223
S AI YL KY
Sbjct: 68 VVINDSFAIIMYLDEKY 84
>At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 221
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +2
Query: 8 VKFYYFPVKALGESQRLLLAYGGQEFED---NRISSENWP-EFKPKTPFGQMPVLEIDGK 175
+K Y + + R+ LA G ++E N + + + +FK P G +P L +DG
Sbjct: 9 LKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPAL-VDGD 67
Query: 176 QYA-QSTAICRYLGRKY 223
S AI YL KY
Sbjct: 68 VVINDSFAIIMYLDEKY 84
>At1g06760.1 68414.m00718 histone H1, putative similar to histone
H1-1 GB:CAA44312 GI:16314 from [Arabidopsis thaliana];
identical to cDNA H1-1C mRNA for histone H1-1 (partial)
GI:732560
Length = 274
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2
Query: 488 SDAPEAGLEQKYPAFRKPIEAVLAIPKVKAYVDAAPRTEL*KSISVQ 628
+ +P+A E+ PA +KP A +A+ K K V AA + + K+I+V+
Sbjct: 135 ASSPKAAAEKSAPAKKKP--ATVAVTKAKRKVAAASKAK--KTIAVK 177
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,432,622
Number of Sequences: 28952
Number of extensions: 292841
Number of successful extensions: 936
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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