Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00239
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 56 3e-08
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 55 6e-08
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 53 2e-07
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 53 2e-07
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 53 2e-07
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 53 2e-07
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 53 2e-07
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 53 2e-07
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 50 2e-06
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 50 2e-06
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 49 3e-06
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 49 3e-06
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 43 2e-04
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 43 2e-04
U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 29 2.6
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 29 2.6
Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 28 5.9
AF047658-4|AAC04417.1| 392|Caenorhabditis elegans Hypothetical ... 28 5.9
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 28 7.8
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/121 (23%), Positives = 65/121 (53%)
Frame = +1
Query: 328 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEEIPITA 507
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 508 *GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDY 687
+ + +A+YFK W SKF + T+ R+F+ S+ ++ ++P + + ++
Sbjct: 137 IKDLIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELDEH 196
Query: 688 K 690
+
Sbjct: 197 R 197
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/114 (25%), Positives = 61/114 (53%)
Frame = +1
Query: 328 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEEIPITA 507
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 508 *GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
+ + +A+YFK W SKF + T+ R+F+ S+ ++ ++P +
Sbjct: 137 IKDLIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFL 190
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Frame = +1
Query: 271 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 447
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 448 KNTVAAKSINDWV-EEIPITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDR 624
A++IN++V E S +A+YFK W +KF + T
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKS 180
Query: 625 DFYVSKDKTIKVPMMY 672
+F+ S D ++ ++
Sbjct: 181 EFFSSADSKREIDFLH 196
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Frame = +1
Query: 271 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 447
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 448 KNTVAAKSINDWV-EEIPITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDR 624
A++IN++V E S +A+YFK W +KF + T
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKS 180
Query: 625 DFYVSKDKTIKVPMMY 672
+F+ S D ++ ++
Sbjct: 181 EFFSSADSKREIDFLH 196
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Frame = +1
Query: 271 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 447
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 448 KNTVAAKSINDWV-EEIPITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDR 624
A++IN++V E S +A+YFK W +KF + T
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKS 180
Query: 625 DFYVSKDKTIKVPMMY 672
+F+ S D ++ ++
Sbjct: 181 EFFSSADSKREIDFLH 196
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Frame = +1
Query: 271 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 447
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 448 KNTVAAKSINDWV-EEIPITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDR 624
A++IN++V E S +A+YFK W +KF + T
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKS 180
Query: 625 DFYVSKDKTIKVPMMY 672
+F+ S D ++ ++
Sbjct: 181 EFFSSADSKREIDFLH 196
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Frame = +1
Query: 271 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 447
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 448 KNTVAAKSINDWV-EEIPITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDR 624
A++IN++V E S +A+YFK W +KF + T
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKS 180
Query: 625 DFYVSKDKTIKVPMMY 672
+F+ S D ++ ++
Sbjct: 181 EFFSSADSKREIDFLH 196
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Frame = +1
Query: 271 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 447
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 448 KNTVAAKSINDWV-EEIPITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDR 624
A++IN++V E S +A+YFK W +KF + T
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKS 180
Query: 625 DFYVSKDKTIKVPMMY 672
+F+ S D ++ ++
Sbjct: 181 EFFSSADSKREIDFLH 196
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/127 (26%), Positives = 60/127 (47%)
Frame = +1
Query: 319 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEEIP 498
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 499 ITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR 678
+AI+F+G W KF E ++ +F +S + VPM+ +
Sbjct: 144 KGKIPDMIKPDNLKDVDAILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRET 201
Query: 679 GDYKYGE 699
DY Y +
Sbjct: 202 RDYFYNK 208
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/127 (26%), Positives = 60/127 (47%)
Frame = +1
Query: 319 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEEIP 498
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 499 ITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR 678
+AI+F+G W KF E ++ +F +S + VPM+ +
Sbjct: 144 KGKIPDMIKPDNLKDVDAILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRET 201
Query: 679 GDYKYGE 699
DY Y +
Sbjct: 202 RDYFYNK 208
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Frame = +1
Query: 271 DDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 447
D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D +++D +
Sbjct: 60 DEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
Query: 448 KNTVAAKSINDWVEEIPITA*GFS*SGLA-QLSHSGCSR---HAIYFKGAWSSKFDERLT 615
A + IN +V TA +A Q S ++IYFK W KFD
Sbjct: 120 -TPAAVQEINSFVN----TATNGKIKNIATQDSIKDAIALLINSIYFKADWDDKFDGMSV 174
Query: 616 SDRDFYVSKDKTIKVPMM 669
S++DF + + K+ M
Sbjct: 175 SEQDFTLHTGEKKKIKFM 192
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Frame = +1
Query: 271 DDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 447
D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D +++D +
Sbjct: 60 DEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
Query: 448 KNTVAAKSINDWVEEIPITA*GFS*SGLA-QLSHSGCSR---HAIYFKGAWSSKFDERLT 615
A + IN +V TA +A Q S ++IYFK W KFD
Sbjct: 120 -TPAAVQEINSFVN----TATNGKIKNIATQDSIKDAIALLINSIYFKADWDDKFDGMSV 174
Query: 616 SDRDFYVSKDKTIKVPMM 669
S++DF + + K+ M
Sbjct: 175 SEQDFTLHTGEKKKIKFM 192
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Frame = +1
Query: 271 DDAIRTEFASKSRDLR-SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 447
D+ + F++ S L + KG E+ +AN ++ + + + + ++N+ ++F
Sbjct: 70 DEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFE 129
Query: 448 KNTVAAKSINDWVEEIP-------ITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDE 606
+A++IN++V E I S +A L++ A YFK W +KF +
Sbjct: 130 DQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTN------AFYFKANWQTKFKK 183
Query: 607 RLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGES 702
T R+F+ S++ + ++ R + KY E+
Sbjct: 184 ESTYKREFFSSENSKRETEFLHSRNSNRKYSEN 216
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Frame = +1
Query: 271 DDAIRTEFASKSRDLR-SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 447
D+ + F++ S L + KG E+ +AN ++ + + + + ++N+ ++F
Sbjct: 70 DEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFE 129
Query: 448 KNTVAAKSINDWVEEIP-------ITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDE 606
+A++IN++V E I S +A L++ A YFK W +KF +
Sbjct: 130 DQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTN------AFYFKANWQTKFKK 183
Query: 607 RLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGES 702
T R+F+ S++ + ++ R + KY E+
Sbjct: 184 ESTYKREFFSSENSKRETEFLHSRNSNRKYSEN 216
>U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical
protein C09B9.3 protein.
Length = 884
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Frame = -1
Query: 495 YFFYPIVNRLSCDCILREINVLDVRIEDVPGNDCKILV*FSTIMNVYFIRHFKLNA---- 328
++++PIV C++ + V + + + +D V F N+Y + +
Sbjct: 267 HYYFPIVTVFQFICLMGWLKVAEALLNPLGEDDDDFEVNFLIDSNIYMTMSYNCDVATDS 326
Query: 327 -FN*SKITAFTREFCSYSIVVREADTFKSSSWVS 229
FN K+ FT+ +I+ + +K S W S
Sbjct: 327 YFNFFKVNPFTKSTYKNNIIFQILFRWKGSVWKS 360
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 589 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 705
S +FD+ L +D Y +KD+ ++ R D++Y A
Sbjct: 648 SGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDA 686
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 589 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 705
S +FD+ L +D Y +KD+ ++ R D++Y A
Sbjct: 140 SGQFDQILYNDLTLYTAKDEETDETLVSNRSDFEYTNDA 178
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 1, isoform a
protein.
Length = 1281
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 200 LAQLALASDGETHEELLKVSASLTTMLYEQNSRVKAVIFDQLKALSLK 343
+AQ+A+ + +ELL++ + LT YE++S + +V Q+ AL LK
Sbjct: 911 IAQVAMKDFTKAEKELLRLESLLTKKQYERHSLLHSVKLGQI-ALPLK 957
>Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical
protein F36F2.2 protein.
Length = 290
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 248 KALHGFHHQKLKLTEREEAAPKMPRGQRFSL 156
K L H ++ T EE+ P P+GQRF L
Sbjct: 163 KGLEEVHEIEVDKTVIEESIPNQPKGQRFDL 193
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 50 IAIAAMAAVTNLSNVLKN-GNDNFTARMFTEVV-KNNPGKSVVLSAFSVLPPLAQLALAS 223
+A+ ++ + N+L+N G D+ R V+ +NN KS+ + F +P L L L+
Sbjct: 124 MALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSG 183
Query: 224 DGET 235
+ T
Sbjct: 184 NNMT 187
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
C05A9.1 protein.
Length = 1283
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +2
Query: 59 AAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETH 238
A A ++ V++N D + R+ T VV + S V++A S+ L +A G TH
Sbjct: 1202 ATSALDSDSEKVVQNALDTASERLSTVVVAHR--LSTVVNADSIAV-LKNGKVAEQG-TH 1257
Query: 239 EELLKVSASLTTMLYEQNSRVKAVI 313
EELL+ + ++ +Q +V+ +I
Sbjct: 1258 EELLRKRSIYWRLVQKQGIQVETLI 1282
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 696 SIFIIAAFIHHGYFDCFVFAHVEVTVTGQSL 604
SI +AFI H +F+CF F E V+ S+
Sbjct: 172 SIIFTSAFILHVFFECFAFGIQEDAVSVTSI 202
>AF047658-4|AAC04417.1| 392|Caenorhabditis elegans Hypothetical
protein K03H6.1 protein.
Length = 392
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = -1
Query: 294 EFCSYSIVVREADTFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILAVK 115
+FC YS +R T+++ WV+PS K + + NA P + +N+L ++
Sbjct: 193 DFCYYS-GMRHQKTYRNKDWVTPSNVKKVYLKFSTFLNAILVVFVP-IVLVIVLNMLMIR 250
Query: 114 -LSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFVA 13
L + S + A+ + +Q + +A
Sbjct: 251 QLKINWTSPRLESMRGAMTRSHVRQRQRVAVTVIA 285
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 141 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 16
TSV + +K +F F+ TLERF++ N++ I F ++
Sbjct: 87 TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,786,249
Number of Sequences: 27780
Number of extensions: 316168
Number of successful extensions: 1010
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -