Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00239
(726 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 53 2e-07
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 52 5e-07
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 50 2e-06
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 48 5e-06
At2g14540.1 68415.m01628 serpin family protein / serine protease... 47 1e-05
At1g64030.1 68414.m07252 serpin family protein / serine protease... 46 3e-05
At2g35580.1 68415.m04357 serpin family protein / serine protease... 45 6e-05
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 42 6e-04
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 41 0.001
At1g62170.1 68414.m07013 serpin family protein / serine protease... 38 0.007
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 31 0.59
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.8
At1g51980.1 68414.m05863 mitochondrial processing peptidase alph... 30 1.8
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 2.4
At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1) ... 29 3.1
At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1) ... 29 3.1
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 4.1
At1g71020.1 68414.m08197 armadillo/beta-catenin repeat family pr... 28 7.2
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Frame = +1
Query: 331 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEEIP--I 501
+ L +AN V++ L +F + + + + +DF SK + +N W E +
Sbjct: 25 LRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGL 84
Query: 502 TA*GFS*SGLAQLSHSGCS-RHAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
S + + S +A+YFKGAWSSKFD +T DF++ ++KVP M
Sbjct: 85 IKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDFHLLDGTSVKVPFM 141
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1
Query: 562 HAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGD 684
+A+YFK AWS KFD +LT D DF++ T+KVP M D
Sbjct: 171 NAVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFMMSYKD 211
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Frame = +1
Query: 331 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS-KNTVAAKSINDWVEEIP--I 501
+ L A V++ +F + + +N+ +DF+ K +N W E +
Sbjct: 90 LHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTNGL 149
Query: 502 TA*GFS*SGLAQLSHSGCS-RHAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM--Y 672
S + + S +A+YFKGAWS KFD +LT DF++ +KVP M Y
Sbjct: 150 IKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHLLDGTMVKVPFMTNY 209
Query: 673 KRGDYKY 693
K+ +Y
Sbjct: 210 KKQYLEY 216
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Frame = +1
Query: 328 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVE-EIPI 501
G +L +AN ++ +F + D + + DF SK +N W E E
Sbjct: 89 GPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVNSWAEKETNG 148
Query: 502 TA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
G A +A+YFKG W+ KFDE LT + +F++ + P M
Sbjct: 149 LITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFM 204
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/85 (30%), Positives = 43/85 (50%)
Frame = +1
Query: 415 FNSDVQNIDFSKNTVAAKSINDWVEEIPITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSS 594
F + + NT A++ ND ++EI S + L + +A+YFKGAW
Sbjct: 156 FRHKAEEVRLDVNTWASRHTNDLIKEILPRG---SVTSLTNWIYG----NALYFKGAWEK 208
Query: 595 KFDERLTSDRDFYVSKDKTIKVPMM 669
FD+ +T D+ F++ K++ VP M
Sbjct: 209 AFDKSMTRDKPFHLLNGKSVSVPFM 233
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Frame = +1
Query: 310 DLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWV 486
D + G ++ AN +++ D F + + F + +DF S+ K +N WV
Sbjct: 84 DRSATGGPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWV 143
Query: 487 EEIPITA*-GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVP 663
E G + +A+ FKGAW F++ T D DFY+ ++ VP
Sbjct: 144 EHHTNNLIKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVP 203
Query: 664 MM 669
M
Sbjct: 204 FM 205
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 44.8 bits (101), Expect = 6e-05
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Frame = +1
Query: 328 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEEIP-- 498
G + AN +++ ++ +F + + + + +DF +K + +N WVE+
Sbjct: 89 GPTISAANGLWIEKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTNG 148
Query: 499 -ITA*GFS*SGLAQLSHSGCSRHAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
IT S A L+ +A++F G W S+FD LT D DF++ ++VP M
Sbjct: 149 LITNLLPSNPKSAPLTDH-IFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPFM 205
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 562 HAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
+A+YFKGAW +KFD+ T D +F+ K+ + VP M
Sbjct: 47 NALYFKGAWENKFDKSSTKDNEFHQGKE--VHVPFM 80
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 562 HAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKY 693
+A+YFKGAW +KF + +T + F++ K + VP M K + KY
Sbjct: 70 NALYFKGAWENKFGKSMTIHKPFHLVNGKQVLVPFM-KSYERKY 112
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 565 AIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
A+YFKG W K+ + +T + FY+ ++ VP M
Sbjct: 235 ALYFKGTWEEKYSKSMTKCKPFYLLNGTSVSVPFM 269
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +2
Query: 137 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELLKVSASL 268
E VKN +PGK VL +++L P AQL + + E E L+ V+ ++
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNV 681
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 178 REDNAFPWIIFHYFGKHSGCEVIVSIFEYIREICDG 71
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At1g51980.1 68414.m05863 mitochondrial processing peptidase alpha
subunit, putative similar to mitochondrial processing
peptidase alpha subunit, mitochondrial precursor,
Alpha-MPP (Ubiquinol-cytochrome C reductase subunit II)
[Potato] SWISS-PROT:P29677
Length = 503
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 203 AQLALASDGETHEELLKVSASLTTML 280
A++ LA+ G HEELLKV+ LT+ L
Sbjct: 256 ARMVLAASGVEHEELLKVAEPLTSDL 281
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 175 EDNAFPWIIFHYFGKHSGCEVIVSIFEYIRE 83
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 250 ESIGFPDDDAIRTEFASKSRDLR 318
ES+GFP DD R F DLR
Sbjct: 122 ESVGFPQDDGFRLGFGGGGGDLR 144
>At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 250 ESIGFPDDDAIRTEFASKSRDLR 318
ES+GFP DD R F DLR
Sbjct: 122 ESVGFPQDDGFRLGFGGGGGDLR 144
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 202 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEYI 89
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g71020.1 68414.m08197 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 628
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 146 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKVSASLTTMLYEQNSRV 301
K + ++++ +P L +L L SDG+T + V+ L +YE N +
Sbjct: 370 KRSTDNRILIAEAGAIPVLVKL-LTSDGDTETQENAVTCILNLSIYEHNKEL 420
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,987,738
Number of Sequences: 28952
Number of extensions: 297482
Number of successful extensions: 1011
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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