Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00238
(767 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69980-1|CAA93820.1| 134|Anopheles gambiae GTP-binding protein ... 111 2e-26
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 101 2e-23
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 49 2e-07
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 5.9
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 24 5.9
AY578809-1|AAT07314.1| 358|Anopheles gambiae Sloan-Kettering In... 23 7.9
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 23 7.9
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 23 7.9
>Z69980-1|CAA93820.1| 134|Anopheles gambiae GTP-binding protein
protein.
Length = 134
Score = 111 bits (268), Expect = 2e-26
Identities = 54/121 (44%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
Frame = +1
Query: 271 SYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELR 450
SYP TDV L+CFSV SP S EN+ EKW PE+ H C P +LVG + DLR++ +T+ +L
Sbjct: 14 SYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLA 73
Query: 451 KMKQEPVKPQEGGYG*KD-*PFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSL 624
K KQ+P+ ++G K+ Y+ECSA +++G++ VF+ A AAL+ + KK +C
Sbjct: 74 KNKQKPITLEQGEKLAKELKAVKYVECSALTQKGLKNVFDVAILAALEPPEPTKKRKCRF 133
Query: 625 L 627
L
Sbjct: 134 L 134
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 101 bits (243), Expect = 2e-23
Identities = 49/102 (48%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Frame = +1
Query: 271 SYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELR 450
SYP TDV L+C+SV SP S EN+ KW PE+KH CP+ PIILVG K DLR D TI+ L
Sbjct: 74 SYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETISLLA 133
Query: 451 KMKQEPVKPQEG-GYG*KD*PFAYLECSAKSKEGVREVFETA 573
+K ++G K Y+ECSA ++ G+++VF+ A
Sbjct: 134 DQGLSALKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEA 175
Score = 89.0 bits (211), Expect = 1e-19
Identities = 39/60 (65%), Positives = 45/60 (75%)
Frame = +2
Query: 74 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 253
K V+VGDG GKTC+LI ++ D FP YVPT F+NY A + VDG QV L LWDTAGQEDY
Sbjct: 8 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDY 67
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 48.8 bits (111), Expect = 2e-07
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 250
KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAGQE
Sbjct: 26 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85
Query: 251 Y 253
Y
Sbjct: 86 Y 86
Score = 29.9 bits (64), Expect = 0.090
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 274 YPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRN 423
Y ++ + + + DS + W E+ + PN+ I L GNK DL N
Sbjct: 94 YRGAQAAIVVYDIQNSDSFARA-KTWVKELQRQASPNIVIALAGNKADLAN 143
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.8 bits (49), Expect = 5.9
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -2
Query: 349 TSLGCSRANP-ASPPRST*GSH 287
T CS A+ SPPRS GSH
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSH 308
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.8 bits (49), Expect = 5.9
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -2
Query: 349 TSLGCSRANP-ASPPRST*GSH 287
T CS A+ SPPRS GSH
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSH 308
>AY578809-1|AAT07314.1| 358|Anopheles gambiae Sloan-Kettering
Institute proto-oncogeneproduct protein.
Length = 358
Score = 23.4 bits (48), Expect = 7.9
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 117 C**CSARINSRKYTCRQCLRITLPTSKWMENKWNWLCGIPLAK 245
C C + +K+ C Q + T W N NW I +A+
Sbjct: 257 CAECRGLFSPQKFVCHQHEPQEIRTCHWGFNSSNWRSYIHVAE 299
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 23.4 bits (48), Expect = 7.9
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 562 TPHVHLPC-FWQSIPDMQTVNLFSHSRLPAVSQALA 458
TP + +P F ++IPD + + H PA S ALA
Sbjct: 782 TPKLDVPSEFKRTIPDRGWIIMPFHESNPAWSSALA 817
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.4 bits (48), Expect = 7.9
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = +1
Query: 544 EGVREVFETATRAALQVK----KKKKTRCSLL*VCC 639
+ E FE A + A + K K K RC+L CC
Sbjct: 1039 QSTNEEFEAARKKAKKAKAAFEKVKNERCTLFTNCC 1074
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,082
Number of Sequences: 2352
Number of extensions: 16664
Number of successful extensions: 48
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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