Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00237
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094968-1|AAM11321.1|  874|Drosophila melanogaster SD07712p pro...    33   0.57 
AF287273-1|AAL02426.1|  993|Drosophila melanogaster DNA replicat...    33   0.57 
AE014134-661|AAN10380.2|  993|Drosophila melanogaster CG33122-PA...    33   0.57 

>AY094968-1|AAM11321.1|  874|Drosophila melanogaster SD07712p
           protein.
          Length = 874

 Score = 32.7 bits (71), Expect = 0.57
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 215 FTGVIELLKFACFTVSVGHECDLVRNY 135
           FTGV E LK+ CFT +V H+    +NY
Sbjct: 584 FTGVCEALKWFCFTDTVQHQISRQQNY 610


>AF287273-1|AAL02426.1|  993|Drosophila melanogaster DNA replication
           accessory factorCutlet protein.
          Length = 993

 Score = 32.7 bits (71), Expect = 0.57
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 215 FTGVIELLKFACFTVSVGHECDLVRNY 135
           FTGV E LK+ CFT +V H+    +NY
Sbjct: 703 FTGVCEALKWFCFTDTVQHQISRQQNY 729


>AE014134-661|AAN10380.2|  993|Drosophila melanogaster CG33122-PA
           protein.
          Length = 993

 Score = 32.7 bits (71), Expect = 0.57
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 215 FTGVIELLKFACFTVSVGHECDLVRNY 135
           FTGV E LK+ CFT +V H+    +NY
Sbjct: 703 FTGVCEALKWFCFTDTVQHQISRQQNY 729


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,620,799
Number of Sequences: 53049
Number of extensions: 503680
Number of successful extensions: 985
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)