Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00236
         (783 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23YT3 Cluster: Putative uncharacterized protein; n=1; ...    38   0.28 
UniRef50_Q6CQ43 Cluster: Autophagy-related protein 2; n=1; Kluyv...    34   3.5  
UniRef50_A0E4V1 Cluster: Chromosome undetermined scaffold_79, wh...    33   6.1  
UniRef50_UPI00015B5893 Cluster: PREDICTED: similar to ENSANGP000...    33   8.1  
UniRef50_Q7P2S6 Cluster: HIPA PROTEIN; n=5; Fusobacterium nuclea...    33   8.1  

>UniRef50_Q23YT3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 785

 Score = 37.9 bits (84), Expect = 0.28
 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = -2

Query: 581 VNLVFTLHILIFVKLIENKYSCFSSLYNFLSGFSGI-FLTHFDGL--KLVSFPITKNLDW 411
           +N+++ L +L+   L+ N+++    L N L+ ++ I F      L  K+V+F   KNLD 
Sbjct: 261 LNILYNLKMLLEFNLVTNRWTLVGHLVNMLASWAYIGFNLAIQVLSKKIVNFQTLKNLDQ 320

Query: 410 SYKLQNVFSLISF 372
             K+QN+ +L  F
Sbjct: 321 LQKMQNLSALFIF 333


>UniRef50_Q6CQ43 Cluster: Autophagy-related protein 2; n=1;
           Kluyveromyces lactis|Rep: Autophagy-related protein 2 -
           Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 1502

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 18/61 (29%), Positives = 35/61 (57%)
 Frame = +2

Query: 449 SGHQNGSKKSLRIPIKNCTMMRNKNTYFQLISRKSKYGV*ILS*LELTF*NINISVLECL 628
           +GH+N +KKS+R+ + +  +M  + T    + +  K  + I + LE TF +I I  + C+
Sbjct: 603 NGHENVTKKSVRL-LHSSNVMNKRATLSNFVLQVHKAKMTITNTLENTFGDITIEAISCI 661

Query: 629 M 631
           +
Sbjct: 662 L 662


>UniRef50_A0E4V1 Cluster: Chromosome undetermined scaffold_79, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_79,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 801

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
 Frame = +1

Query: 379 IKLNTFCNLYDQSKFFV--IGKDTSFRPSKWVKKIPENPDKKLYNDEKQE--YLFSINFT 546
           + LN F NL    K  +    +DT  + S  ++ +   PD+ +Y+  + +  YL+ +++ 
Sbjct: 458 LMLNVFKNLLQDCKIVLHNFSEDTIKKMSNSLQTVYYCPDEYIYHQNQMDDNYLYFLDYG 517

Query: 547 KIKIWSVNTKLT*VDILKY*YIG 615
           K++I+  N++    ++ K  Y G
Sbjct: 518 KVEIYEQNSQQKVTELQKGKYFG 540


>UniRef50_UPI00015B5893 Cluster: PREDICTED: similar to
           ENSANGP00000011865; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000011865 - Nasonia
           vitripennis
          Length = 865

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 331 LFYYITLSTY-YARLKLIKLNTFCNLYDQSKFFVIGKDTSFRPSKWVKKIPENPDKKLYN 507
           L+YY    TY Y    L  L  FC L  +S     G DT   P K  K+  E  DKK   
Sbjct: 117 LWYYEGFFTYLYGVSILFLLYVFCFLLQESACCSRGADTPPPPPKQPKQPKEKKDKKDKK 176

Query: 508 DEKQE 522
           D+K +
Sbjct: 177 DKKDK 181


>UniRef50_Q7P2S6 Cluster: HIPA PROTEIN; n=5; Fusobacterium
           nucleatum|Rep: HIPA PROTEIN - Fusobacterium nucleatum
           subsp. vincentii ATCC 49256
          Length = 381

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +1

Query: 442 TSFRPSKWVKKIPENPDKKLYNDEKQEYLFSINFTKIKIWSVNTKL 579
           T F    W+ K P + D K  N  K EYL+S+   K KI    TKL
Sbjct: 168 TKFNNEDWIIKFPSSSDNK--NIGKLEYLYSLCAKKCKINMPETKL 211


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,376,307
Number of Sequences: 1657284
Number of extensions: 12741406
Number of successful extensions: 29018
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29009
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)