Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00236
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
 Frame = +1

Query: 358 YYARLKLIKLNTFCNLYDQSKFFVIGKDTS-----FRPSKWVKKIPENPDKKLYNDEKQE 522
           Y     ++  N    L  +  + V+  DT      ++  +WV    ++P K + N  K E
Sbjct: 290 YTGEAGMLGYNEIVELQKEGGWKVVWDDTQKNTHMYKGDQWVAF--DSP-KAISN--KVE 344

Query: 523 YLFSINFTKIKIWSVNT 573
           Y  S+N   + IWS+ T
Sbjct: 345 YAKSLNLGGVMIWSIET 361


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 514 KQEYLFSINFTKIKIWSVNT 573
           K +Y  S+N   + IWS+ T
Sbjct: 346 KVQYAKSLNLAGVMIWSIET 365


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 327 VLERFDSRRLLLAS*FPAFKMRFLLTNAIELLR*IKTTLN 208
           +L+R+ S  L+  + F     R  L NA+++L  I  TLN
Sbjct: 72  ILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSKIDETLN 111


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 327 VLERFDSRRLLLAS*FPAFKMRFLLTNAIELLR*IKTTLN 208
           +L+R+ S  L+  + F     R  L NA+++L  I  TLN
Sbjct: 68  ILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSKIDETLN 107


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 9/42 (21%)
 Frame = -2

Query: 566 TLHILIFVKLI----ENK-----YSCFSSLYNFLSGFSGIFL 468
           TL +LI++++I    +N      YS    L++ +  FSGIFL
Sbjct: 224 TLQLLIYIQVIVIGTKNTIETVAYSVIFILWHIVGTFSGIFL 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,720
Number of Sequences: 336
Number of extensions: 3478
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)