Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00235
(816 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14820-1|CAA75099.1| 254|Homo sapiens surface 4 integral membra... 119 1e-26
BC111023-1|AAI11024.1| 269|Homo sapiens surfeit 4 protein. 119 1e-26
BC018741-1|AAH18741.1| 269|Homo sapiens surfeit 4 protein. 119 1e-26
AL158826-15|CAI12840.1| 269|Homo sapiens surfeit 4 protein. 119 1e-26
AL158826-16|CAI12841.1| 186|Homo sapiens surfeit 4 protein. 89 2e-17
AL158826-14|CAI12839.1| 188|Homo sapiens surfeit 4 protein. 89 2e-17
U89355-1|AAC51340.1| 932|Homo sapiens CREB-binding protein prot... 33 1.2
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot... 33 1.2
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot... 33 1.2
AC004760-1|AAC17736.1| 923|Homo sapiens CBP protein. 33 1.2
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ... 33 1.2
M35296-1|AAA35553.1| 1182|Homo sapiens protein ( Human tyrosine ... 30 8.7
DQ009672-1|AAY16984.1| 1182|Homo sapiens v-abl Abelson murine le... 30 8.7
BX538317-1|CAD98092.1| 1092|Homo sapiens hypothetical protein pr... 30 8.7
BC065912-1|AAH65912.1| 1167|Homo sapiens ABL2 protein protein. 30 8.7
AL512326-6|CAI13570.1| 1182|Homo sapiens v-abl Abelson murine le... 30 8.7
AL512326-2|CAI13566.1| 1064|Homo sapiens v-abl Abelson murine le... 30 8.7
AL359179-2|CAI15585.1| 1182|Homo sapiens v-abl Abelson murine le... 30 8.7
AL359179-1|CAI15584.1| 1064|Homo sapiens v-abl Abelson murine le... 30 8.7
AL139132-5|CAH70925.1| 1182|Homo sapiens v-abl Abelson murine le... 30 8.7
AL139132-1|CAH70921.1| 1064|Homo sapiens v-abl Abelson murine le... 30 8.7
>Y14820-1|CAA75099.1| 254|Homo sapiens surface 4 integral membrane
protein protein.
Length = 254
Score = 119 bits (287), Expect = 1e-26
Identities = 63/167 (37%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Frame = +2
Query: 257 WGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXX 436
W CG LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 52 WNCGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLM 111
Query: 437 XXXXXXXXXXXXXXXXXXXXXXC-SGRAVARREQTEDVLATRRRILLAFMFITLLRFEIS 613
+G R + + R+LL MF+TLL F+ S
Sbjct: 112 RNLALGGGLLLVLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDAS 171
Query: 614 FLQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAV 754
F I+Q+++G+ LMILV +G++TK Y NA+W +
Sbjct: 172 FFSIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYFNAFWTI 218
Score = 85.8 bits (203), Expect = 2e-16
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +3
Query: 108 TAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMD 251
TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D
Sbjct: 2 TAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYID 49
Score = 37.1 bits (82), Expect = 0.076
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 756 ILQPLRDFLKYDFFQTLSVI 815
+ +P+ DFLKYDFFQT+SVI
Sbjct: 220 VYKPMHDFLKYDFFQTMSVI 239
>BC111023-1|AAI11024.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 119 bits (287), Expect = 1e-26
Identities = 63/167 (37%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Frame = +2
Query: 257 WGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXX 436
W CG LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 59 WNCGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLM 118
Query: 437 XXXXXXXXXXXXXXXXXXXXXXC-SGRAVARREQTEDVLATRRRILLAFMFITLLRFEIS 613
+G R + + R+LL MF+TLL F+ S
Sbjct: 119 RNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDAS 178
Query: 614 FLQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAV 754
F I+Q+++G+ LMILV +G++TK Y NA+W +
Sbjct: 179 FFSIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYFNAFWTI 225
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +3
Query: 93 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMD 251
N+ + TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYID 56
Score = 37.1 bits (82), Expect = 0.076
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 756 ILQPLRDFLKYDFFQTLSVI 815
+ +P+ DFLKYDFFQT+SVI
Sbjct: 227 VYKPMHDFLKYDFFQTMSVI 246
>BC018741-1|AAH18741.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 119 bits (287), Expect = 1e-26
Identities = 63/167 (37%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Frame = +2
Query: 257 WGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXX 436
W CG LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 59 WNCGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLM 118
Query: 437 XXXXXXXXXXXXXXXXXXXXXXC-SGRAVARREQTEDVLATRRRILLAFMFITLLRFEIS 613
+G R + + R+LL MF+TLL F+ S
Sbjct: 119 RNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDAS 178
Query: 614 FLQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAV 754
F I+Q+++G+ LMILV +G++TK Y NA+W +
Sbjct: 179 FFSIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYFNAFWTI 225
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +3
Query: 93 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMD 251
N+ + TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYID 56
Score = 37.1 bits (82), Expect = 0.076
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 756 ILQPLRDFLKYDFFQTLSVI 815
+ +P+ DFLKYDFFQT+SVI
Sbjct: 227 VYKPMHDFLKYDFFQTMSVI 246
>AL158826-15|CAI12840.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 119 bits (287), Expect = 1e-26
Identities = 63/167 (37%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Frame = +2
Query: 257 WGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXX 436
W CG LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 59 WNCGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLM 118
Query: 437 XXXXXXXXXXXXXXXXXXXXXXC-SGRAVARREQTEDVLATRRRILLAFMFITLLRFEIS 613
+G R + + R+LL MF+TLL F+ S
Sbjct: 119 RNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDAS 178
Query: 614 FLQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAV 754
F I+Q+++G+ LMILV +G++TK Y NA+W +
Sbjct: 179 FFSIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYFNAFWTI 225
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +3
Query: 93 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMD 251
N+ + TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYID 56
Score = 37.1 bits (82), Expect = 0.076
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 756 ILQPLRDFLKYDFFQTLSVI 815
+ +P+ DFLKYDFFQT+SVI
Sbjct: 227 VYKPMHDFLKYDFFQTMSVI 246
>AL158826-16|CAI12841.1| 186|Homo sapiens surfeit 4 protein.
Length = 186
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +3
Query: 93 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMD 251
N+ + TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYID 56
Score = 86.2 bits (204), Expect = 1e-16
Identities = 48/121 (39%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +2
Query: 257 WGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXX 436
W CG LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 59 WNCGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLM 118
Query: 437 XXXXXXXXXXXXXXXXXXXXXXC-SGRAVARREQTEDVLATRRRILLAFMFITLLRFEIS 613
+G R + + R+LL MF+TLL F+ S
Sbjct: 119 RNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDAS 178
Query: 614 F 616
F
Sbjct: 179 F 179
>AL158826-14|CAI12839.1| 188|Homo sapiens surfeit 4 protein.
Length = 188
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +3
Query: 93 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMD 251
N+ + TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYID 56
Score = 76.6 bits (180), Expect = 1e-13
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = +2
Query: 257 WGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQF 430
W CG LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 59 WNCGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKF 116
>U89355-1|AAC51340.1| 932|Homo sapiens CREB-binding protein
protein.
Length = 932
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = -1
Query: 453 INAKLRRRNCTSHSILYANVCNTTMKNSTPQAISTLSLPSTITHPPN*PNKFTITNIVAR 274
I KLR++ H + A + M + + SLPS + PP P + T +
Sbjct: 336 IKHKLRQQQI-QHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQ 394
Query: 273 NLPQPQACPCSLSALTTGTTCGDRPP 196
QPQ P S+S + +PP
Sbjct: 395 PPAQPQPSPVSMSPAGFPSVARTQPP 420
>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = -1
Query: 453 INAKLRRRNCTSHSILYANVCNTTMKNSTPQAISTLSLPSTITHPPN*PNKFTITNIVAR 274
I KLR++ H + A + M + + SLPS + PP P + T +
Sbjct: 1846 IKHKLRQQQI-QHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQ 1904
Query: 273 NLPQPQACPCSLSALTTGTTCGDRPP 196
QPQ P S+S + +PP
Sbjct: 1905 PPAQPQPSPVSMSPAGFPSVARTQPP 1930
>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = -1
Query: 453 INAKLRRRNCTSHSILYANVCNTTMKNSTPQAISTLSLPSTITHPPN*PNKFTITNIVAR 274
I KLR++ H + A + M + + SLPS + PP P + T +
Sbjct: 1846 IKHKLRQQQI-QHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQ 1904
Query: 273 NLPQPQACPCSLSALTTGTTCGDRPP 196
QPQ P S+S + +PP
Sbjct: 1905 PPAQPQPSPVSMSPAGFPSVARTQPP 1930
>AC004760-1|AAC17736.1| 923|Homo sapiens CBP protein.
Length = 923
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = -1
Query: 453 INAKLRRRNCTSHSILYANVCNTTMKNSTPQAISTLSLPSTITHPPN*PNKFTITNIVAR 274
I KLR++ H + A + M + + SLPS + PP P + T +
Sbjct: 327 IKHKLRQQQI-QHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQ 385
Query: 273 NLPQPQACPCSLSALTTGTTCGDRPP 196
QPQ P S+S + +PP
Sbjct: 386 PPAQPQPSPVSMSPAGFPSVARTQPP 411
>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
protein.
Length = 2472
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = -1
Query: 453 INAKLRRRNCTSHSILYANVCNTTMKNSTPQAISTLSLPSTITHPPN*PNKFTITNIVAR 274
I KLR++ H + A + M + + SLPS + PP P + T +
Sbjct: 1876 IKHKLRQQQI-QHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQ 1934
Query: 273 NLPQPQACPCSLSALTTGTTCGDRPP 196
QPQ P S+S + +PP
Sbjct: 1935 PPAQPQPSPVSMSPAGFPSVARTQPP 1960
>M35296-1|AAA35553.1| 1182|Homo sapiens protein ( Human tyrosine
kinase arg gene mRNA. ).
Length = 1182
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPN-CGEGTVRP 417
P R++P+ PPP P + L P+ C + T P
Sbjct: 975 PRRVKPKCAPPPPPVMRLLQHPSICSDPTEEP 1006
>DQ009672-1|AAY16984.1| 1182|Homo sapiens v-abl Abelson murine
leukemia viral oncogene homolog 2 (arg, Abelson-related
ge protein.
Length = 1182
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPN-CGEGTVRP 417
P R++P+ PPP P + L P+ C + T P
Sbjct: 975 PRRVKPKCAPPPPPVMRLLQHPSICSDPTEEP 1006
>BX538317-1|CAD98092.1| 1092|Homo sapiens hypothetical protein
protein.
Length = 1092
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPN-CGEGTVRP 417
P R++P+ PPP P + L P+ C + T P
Sbjct: 885 PRRVKPRCAPPPPPVMRLLQHPSICSDPTEEP 916
>BC065912-1|AAH65912.1| 1167|Homo sapiens ABL2 protein protein.
Length = 1167
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPN-CGEGTVRP 417
P R++P+ PPP P + L P+ C + T P
Sbjct: 960 PRRVKPKCAPPPPPVMRLLQHPSICSDPTEEP 991
>AL512326-6|CAI13570.1| 1182|Homo sapiens v-abl Abelson murine
leukemia viral oncogene homolog 2 (arg, Abelson-related
ge protein.
Length = 1182
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPN-CGEGTVRP 417
P R++P+ PPP P + L P+ C + T P
Sbjct: 975 PRRVKPKCAPPPPPVMRLLQHPSICSDPTEEP 1006
>AL512326-2|CAI13566.1| 1064|Homo sapiens v-abl Abelson murine
leukemia viral oncogene homolog 2 (arg, Abelson-related
ge protein.
Length = 1064
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPN-CGEGTVRP 417
P R++P+ PPP P + L P+ C + T P
Sbjct: 857 PRRVKPKCAPPPPPVMRLLQHPSICSDPTEEP 888
>AL359179-2|CAI15585.1| 1182|Homo sapiens v-abl Abelson murine
leukemia viral oncogene homolog 2 (arg, Abelson-related
ge protein.
Length = 1182
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPN-CGEGTVRP 417
P R++P+ PPP P + L P+ C + T P
Sbjct: 975 PRRVKPKCAPPPPPVMRLLQHPSICSDPTEEP 1006
>AL359179-1|CAI15584.1| 1064|Homo sapiens v-abl Abelson murine
leukemia viral oncogene homolog 2 (arg, Abelson-related
ge protein.
Length = 1064
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPN-CGEGTVRP 417
P R++P+ PPP P + L P+ C + T P
Sbjct: 857 PRRVKPKCAPPPPPVMRLLQHPSICSDPTEEP 888
>AL139132-5|CAH70925.1| 1182|Homo sapiens v-abl Abelson murine
leukemia viral oncogene homolog 2 (arg, Abelson-related
ge protein.
Length = 1182
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPN-CGEGTVRP 417
P R++P+ PPP P + L P+ C + T P
Sbjct: 975 PRRVKPKCAPPPPPVMRLLQHPSICSDPTEEP 1006
>AL139132-1|CAH70921.1| 1064|Homo sapiens v-abl Abelson murine
leukemia viral oncogene homolog 2 (arg, Abelson-related
ge protein.
Length = 1064
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPN-CGEGTVRP 417
P R++P+ PPP P + L P+ C + T P
Sbjct: 857 PRRVKPKCAPPPPPVMRLLQHPSICSDPTEEP 888
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,134,091
Number of Sequences: 237096
Number of extensions: 2750082
Number of successful extensions: 11686
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11664
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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