Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00235
(816 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14823-1|CAA75100.1| 270|Drosophila melanogaster SURF-4 protein... 167 1e-41
AY118406-1|AAM48435.1| 270|Drosophila melanogaster RE62265p pro... 167 1e-41
AE014297-2017|AAN13656.1| 270|Drosophila melanogaster CG6202-PB... 167 1e-41
AE014297-2016|AAF55176.1| 270|Drosophila melanogaster CG6202-PA... 167 1e-41
BT023877-1|ABA81811.1| 864|Drosophila melanogaster SD12752p pro... 33 0.35
AE014134-668|AAF51067.1| 1131|Drosophila melanogaster CG10019-PA... 31 1.4
AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA ... 31 1.9
BT025826-1|ABF85726.1| 391|Drosophila melanogaster IP06836p pro... 29 5.8
S63550-1|AAB27433.1| 921|Drosophila melanogaster transcription ... 29 7.6
BT025195-1|ABF17886.2| 851|Drosophila melanogaster FI01125p pro... 29 7.6
AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p pro... 29 7.6
AY069807-1|AAL39952.1| 851|Drosophila melanogaster SD04735p pro... 29 7.6
AY051894-1|AAK93318.1| 931|Drosophila melanogaster LD38259p pro... 29 7.6
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P... 29 7.6
AE014296-2641|AAS64986.1| 851|Drosophila melanogaster CG5444-PD... 29 7.6
AE014296-2640|AAO41248.1| 851|Drosophila melanogaster CG5444-PC... 29 7.6
AE014296-2639|AAF49536.1| 921|Drosophila melanogaster CG5444-PB... 29 7.6
AE014296-2638|AAF49535.1| 921|Drosophila melanogaster CG5444-PA... 29 7.6
>Y14823-1|CAA75100.1| 270|Drosophila melanogaster SURF-4 protein
protein.
Length = 270
Score = 167 bits (407), Expect = 1e-41
Identities = 84/168 (50%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Frame = +2
Query: 254 AWGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFX 433
+WGCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF
Sbjct: 59 SWGCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFL 118
Query: 434 XXXXXXXXXXXXXXXXXXXXXXXC-SGRAVARREQTEDVLATRRRILLAFMFITLLRFEI 610
+G + ++ + RILLAFMFITL+RFE+
Sbjct: 119 LRNFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLIRFEL 178
Query: 611 SFLQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAV 754
S Q+IQD++GSILM+LV +GY+TK YHNAWW +
Sbjct: 179 SVWQVIQDIIGSILMVLVVLGYKTKLSALILVALLTILNLYHNAWWTI 226
Score = 103 bits (248), Expect = 2e-22
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = +3
Query: 81 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDM 254
M IPNEY++ EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDM
Sbjct: 1 MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDM 58
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 762 QPLRDFLKYDFFQTLSVI 815
+PLRDFLKYDFFQTLSVI
Sbjct: 230 KPLRDFLKYDFFQTLSVI 247
Score = 34.3 bits (75), Expect = 0.20
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 510 GVPSLGENKPKTYLQLA 560
GVPS+GENKPK ++QLA
Sbjct: 145 GVPSMGENKPKNFMQLA 161
>AY118406-1|AAM48435.1| 270|Drosophila melanogaster RE62265p
protein.
Length = 270
Score = 167 bits (407), Expect = 1e-41
Identities = 84/168 (50%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Frame = +2
Query: 254 AWGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFX 433
+WGCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF
Sbjct: 59 SWGCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFL 118
Query: 434 XXXXXXXXXXXXXXXXXXXXXXXC-SGRAVARREQTEDVLATRRRILLAFMFITLLRFEI 610
+G + ++ + RILLAFMFITL+RFE+
Sbjct: 119 LRNFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLIRFEL 178
Query: 611 SFLQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAV 754
S Q+IQD++GSILM+LV +GY+TK YHNAWW +
Sbjct: 179 SVWQVIQDIIGSILMVLVVLGYKTKLSALILVALLTILNLYHNAWWTI 226
Score = 103 bits (248), Expect = 2e-22
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = +3
Query: 81 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDM 254
M IPNEY++ EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDM
Sbjct: 1 MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDM 58
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 762 QPLRDFLKYDFFQTLSVI 815
+PLRDFLKYDFFQTLSVI
Sbjct: 230 KPLRDFLKYDFFQTLSVI 247
Score = 34.3 bits (75), Expect = 0.20
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 510 GVPSLGENKPKTYLQLA 560
GVPS+GENKPK ++QLA
Sbjct: 145 GVPSMGENKPKNFMQLA 161
>AE014297-2017|AAN13656.1| 270|Drosophila melanogaster CG6202-PB,
isoform B protein.
Length = 270
Score = 167 bits (407), Expect = 1e-41
Identities = 84/168 (50%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Frame = +2
Query: 254 AWGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFX 433
+WGCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF
Sbjct: 59 SWGCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFL 118
Query: 434 XXXXXXXXXXXXXXXXXXXXXXXC-SGRAVARREQTEDVLATRRRILLAFMFITLLRFEI 610
+G + ++ + RILLAFMFITL+RFE+
Sbjct: 119 LRNFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLIRFEL 178
Query: 611 SFLQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAV 754
S Q+IQD++GSILM+LV +GY+TK YHNAWW +
Sbjct: 179 SVWQVIQDIIGSILMVLVVLGYKTKLSALILVALLTILNLYHNAWWTI 226
Score = 103 bits (248), Expect = 2e-22
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = +3
Query: 81 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDM 254
M IPNEY++ EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDM
Sbjct: 1 MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDM 58
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 762 QPLRDFLKYDFFQTLSVI 815
+PLRDFLKYDFFQTLSVI
Sbjct: 230 KPLRDFLKYDFFQTLSVI 247
Score = 34.3 bits (75), Expect = 0.20
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 510 GVPSLGENKPKTYLQLA 560
GVPS+GENKPK ++QLA
Sbjct: 145 GVPSMGENKPKNFMQLA 161
>AE014297-2016|AAF55176.1| 270|Drosophila melanogaster CG6202-PA,
isoform A protein.
Length = 270
Score = 167 bits (407), Expect = 1e-41
Identities = 84/168 (50%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Frame = +2
Query: 254 AWGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFX 433
+WGCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF
Sbjct: 59 SWGCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFL 118
Query: 434 XXXXXXXXXXXXXXXXXXXXXXXC-SGRAVARREQTEDVLATRRRILLAFMFITLLRFEI 610
+G + ++ + RILLAFMFITL+RFE+
Sbjct: 119 LRNFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLIRFEL 178
Query: 611 SFLQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAV 754
S Q+IQD++GSILM+LV +GY+TK YHNAWW +
Sbjct: 179 SVWQVIQDIIGSILMVLVVLGYKTKLSALILVALLTILNLYHNAWWTI 226
Score = 103 bits (248), Expect = 2e-22
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = +3
Query: 81 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDM 254
M IPNEY++ EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDM
Sbjct: 1 MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDM 58
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +3
Query: 762 QPLRDFLKYDFFQTLSVI 815
+PLRDFLKYDFFQTLSVI
Sbjct: 230 KPLRDFLKYDFFQTLSVI 247
Score = 34.3 bits (75), Expect = 0.20
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 510 GVPSLGENKPKTYLQLA 560
GVPS+GENKPK ++QLA
Sbjct: 145 GVPSMGENKPKNFMQLA 161
>BT023877-1|ABA81811.1| 864|Drosophila melanogaster SD12752p protein.
Length = 864
Score = 33.5 bits (73), Expect = 0.35
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = -1
Query: 399 NVCNTTMKNSTPQAISTLSLPSTITHPPN*PNKFTITNIVARNLPQPQACPCSLSALTTG 220
NV + T+K T + + T S P + T T T I ++ P P + +A T
Sbjct: 794 NVTSNTIKTKTTKPVKTASEPRSPTPKAGGSVTTTTTTITTKSSPSPAPASPTTAAPPTS 853
Query: 219 TTCGDRPPG 193
PPG
Sbjct: 854 APASSAPPG 862
>AE014134-668|AAF51067.1| 1131|Drosophila melanogaster CG10019-PA
protein.
Length = 1131
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -3
Query: 787 YLRKSLSGCRMHRPPRVMVQIENCQYEDKHQSRQLRPVA-HRHQYHQDAPEKILYDLQE* 611
Y +++GC P + Q+ D H ++Q PVA H+H HQ P+ L D
Sbjct: 264 YANPNINGCCYMYNPMPPAHQSHHQH-DHHHAQQHHPVAQHQHHPHQYGPQYCLCDNWYH 322
Query: 610 DFKS*ERDEHEGQQDA 563
++ +H QQ A
Sbjct: 323 QPPPTQQQQHHHQQRA 338
>AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA
protein.
Length = 3166
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = -1
Query: 399 NVCNTTMKNSTPQAISTLSLPSTITHPPN*PNKFTITNIVARNLPQPQACPCSLSALTTG 220
NV + T+K T + + T S P + T T T I ++ P P + +A T
Sbjct: 835 NVTSNTIKTKTTKPVKTASEPRSPTPKAGGSVTTTTTTITTKSSPSPAPASPTTAAPPTS 894
Query: 219 TTCGDRPP 196
PP
Sbjct: 895 APASSAPP 902
>BT025826-1|ABF85726.1| 391|Drosophila melanogaster IP06836p
protein.
Length = 391
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -2
Query: 509 PNRLRPQLGPPPTPAVALRSMPNCGEGTVRPIVYCTRMSVIQL*RTARRKR 357
P R RPQ P P P ++R + +VRP R I++ R RR R
Sbjct: 255 PTRPRPQFHPQPLPLASVRMTLRRSDCSVRPA--AKRRRPIRMARRRRRMR 303
>S63550-1|AAB27433.1| 921|Drosophila melanogaster transcription
initiation factorTFIID 110 kda protein.
Length = 921
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 560 GELQVRLRFVLSERRHAPNRLRPQLGPPPTPAVALRSMPNCGEGTVRPI 414
G+ Q++ ++ H P+ GPPPTP +++ S N T PI
Sbjct: 514 GQTQIK---AITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 559
>BT025195-1|ABF17886.2| 851|Drosophila melanogaster FI01125p
protein.
Length = 851
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 560 GELQVRLRFVLSERRHAPNRLRPQLGPPPTPAVALRSMPNCGEGTVRPI 414
G+ Q++ ++ H P+ GPPPTP +++ S N T PI
Sbjct: 444 GQTQIK---AITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 489
>AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p
protein.
Length = 1272
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 757 MHRPPRVMVQIENCQYEDKHQSRQLRPVAHRHQYHQDAPE 638
M PP MVQ EN Q +Q++P H H +HQ P+
Sbjct: 724 MEAPP-TMVQ-ENWDRHHPQQQQQMQP-HHHHHHHQQQPQ 760
>AY069807-1|AAL39952.1| 851|Drosophila melanogaster SD04735p
protein.
Length = 851
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 560 GELQVRLRFVLSERRHAPNRLRPQLGPPPTPAVALRSMPNCGEGTVRPI 414
G+ Q++ ++ H P+ GPPPTP +++ S N T PI
Sbjct: 444 GQTQIK---AITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 489
>AY051894-1|AAK93318.1| 931|Drosophila melanogaster LD38259p
protein.
Length = 931
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 483 PELRAQSVRGVPSLGENKPKTYLQLAVASCWP 578
P + V G P++ N+PK ASCWP
Sbjct: 885 PGIDVPRVTGFPTVSYNQPKIPAARHAASCWP 916
>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
protein.
Length = 3539
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 757 MHRPPRVMVQIENCQYEDKHQSRQLRPVAHRHQYHQDAPE 638
M PP MVQ EN Q +Q++P H H +HQ P+
Sbjct: 2991 MEAPP-TMVQ-ENWDRHHPQQQQQMQP-HHHHHHHQQQPQ 3027
>AE014296-2641|AAS64986.1| 851|Drosophila melanogaster CG5444-PD,
isoform D protein.
Length = 851
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 560 GELQVRLRFVLSERRHAPNRLRPQLGPPPTPAVALRSMPNCGEGTVRPI 414
G+ Q++ ++ H P+ GPPPTP +++ S N T PI
Sbjct: 444 GQTQIK---AITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 489
>AE014296-2640|AAO41248.1| 851|Drosophila melanogaster CG5444-PC,
isoform C protein.
Length = 851
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 560 GELQVRLRFVLSERRHAPNRLRPQLGPPPTPAVALRSMPNCGEGTVRPI 414
G+ Q++ ++ H P+ GPPPTP +++ S N T PI
Sbjct: 444 GQTQIK---AITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 489
>AE014296-2639|AAF49536.1| 921|Drosophila melanogaster CG5444-PB,
isoform B protein.
Length = 921
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 560 GELQVRLRFVLSERRHAPNRLRPQLGPPPTPAVALRSMPNCGEGTVRPI 414
G+ Q++ ++ H P+ GPPPTP +++ S N T PI
Sbjct: 514 GQTQIK---AITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 559
>AE014296-2638|AAF49535.1| 921|Drosophila melanogaster CG5444-PA,
isoform A protein.
Length = 921
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 560 GELQVRLRFVLSERRHAPNRLRPQLGPPPTPAVALRSMPNCGEGTVRPI 414
G+ Q++ ++ H P+ GPPPTP +++ S N T PI
Sbjct: 514 GQTQIK---AITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 559
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,865,949
Number of Sequences: 53049
Number of extensions: 863880
Number of successful extensions: 3323
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3300
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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