Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00234
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              25   0.66 
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              25   0.66 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   4.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   4.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.1  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 288 ELRRIFLNLRILKKLMKEARIRSFSLKYCLSNKL 389
           EL  I+L+  ++KKL+ E  + S +  Y   NKL
Sbjct: 86  ELTSIYLDENVIKKLVAECSVISDANIYIRFNKL 119


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 288 ELRRIFLNLRILKKLMKEARIRSFSLKYCLSNKL 389
           EL  I+L+  ++KKL+ E  + S +  Y   NKL
Sbjct: 86  ELTSIYLDENVIKKLVAECSVISDANIYIRFNKL 119


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 492 SKHFCSLCTD 521
           SKH CS+C D
Sbjct: 106 SKHLCSICGD 115


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 492 SKHFCSLCTD 521
           SKH CS+C D
Sbjct: 106 SKHLCSICGD 115


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 335 EGSANKELLLKILSFK*VNMYINYHHGL 418
           +G      ++KI +F   +  INYH G+
Sbjct: 205 KGDGRHMEVIKIKNFDNCDQRINYHFGM 232


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 207 QSNVLCKRVIKWTHKK 160
           Q    C R IKWT+++
Sbjct: 469 QDREYCPRYIKWTNRE 484


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,383
Number of Sequences: 438
Number of extensions: 3937
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)