Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00231
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12216| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_54208| Best HMM Match : fn3 (HMM E-Value=0) 47 2e-05
SB_30778| Best HMM Match : fn3 (HMM E-Value=1.99965e-42) 46 3e-05
SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_53570| Best HMM Match : Y_phosphatase (HMM E-Value=0) 44 1e-04
SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_29852| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 40 0.002
SB_57625| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_5079| Best HMM Match : fn3 (HMM E-Value=1.3e-35) 37 0.020
SB_1850| Best HMM Match : fn3 (HMM E-Value=7.5e-22) 36 0.027
SB_26361| Best HMM Match : fn3 (HMM E-Value=0) 36 0.036
SB_3684| Best HMM Match : fn3 (HMM E-Value=8e-11) 36 0.036
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_17577| Best HMM Match : fn3 (HMM E-Value=0) 34 0.11
SB_38971| Best HMM Match : SRCR (HMM E-Value=0) 34 0.14
SB_12046| Best HMM Match : fn3 (HMM E-Value=0) 34 0.14
SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_3077| Best HMM Match : fn3 (HMM E-Value=8e-28) 33 0.25
SB_1171| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39) 32 0.44
SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35) 32 0.58
SB_57926| Best HMM Match : I-set (HMM E-Value=3.5e-39) 31 0.76
SB_19802| Best HMM Match : fn3 (HMM E-Value=0) 31 1.0
SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_24585| Best HMM Match : Integrase (HMM E-Value=7.9) 31 1.3
SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_43390| Best HMM Match : fn3 (HMM E-Value=9.3e-30) 31 1.3
SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_5758| Best HMM Match : fn3 (HMM E-Value=6.6e-18) 30 1.8
SB_58111| Best HMM Match : fn3 (HMM E-Value=0) 30 1.8
SB_99| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11) 30 2.3
SB_2034| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_58926| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_51115| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_42991| Best HMM Match : fn3 (HMM E-Value=7.2e-08) 29 3.1
SB_9051| Best HMM Match : Y_phosphatase (HMM E-Value=0) 29 3.1
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_55420| Best HMM Match : fn3 (HMM E-Value=0) 29 4.1
SB_40750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_9448| Best HMM Match : fn3 (HMM E-Value=2.4e-09) 29 5.4
SB_19290| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17) 29 5.4
SB_20375| Best HMM Match : fn3 (HMM E-Value=3e-35) 28 7.1
SB_6778| Best HMM Match : fn3 (HMM E-Value=0.13) 28 7.1
SB_38614| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_32103| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_6306| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-05) 28 9.4
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_12216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2992
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/81 (32%), Positives = 39/81 (48%)
Frame = +1
Query: 1 VRDWQQTEHLVTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQ 180
+ + Q H++ + PY I++ A KG NV+ V + ED P PGN++L
Sbjct: 2114 INNGSQLSHVLKGLKKYGPYDIRLLAFTVKGEGNVSE-SVFCRTAEDAPDGTPGNVTLES 2172
Query: 181 VTSGTSAVLSWTPVAPESLRG 243
T T L W+P+ PE G
Sbjct: 2173 STL-TELTLHWSPILPELENG 2192
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 633 KLAGLEPNTKYRIEIRAKTKAGEGKGY 713
++ GLE T Y + IRA T GEG Y
Sbjct: 2421 RIEGLESYTLYNVTIRAYTSKGEGPMY 2447
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 606 EIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
E+ P L GL+ T+YRIE+ T G+G
Sbjct: 2519 EVGPSTQSVTLTGLDIYTQYRIEVAGFTIKGDG 2551
>SB_54208| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1292
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +1
Query: 19 TEHLVTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTS 198
T+ +T + Y+I+V A KG N T + ++ +GED P QAP N++ T+ T+
Sbjct: 761 TDIKLTGLQMAEQYEIRVAAGTVKGYGNET-VHMVH-TGEDVPGQAPSNITAQNRTTLTT 818
Query: 199 AVLSWTPVAPESLRG 243
+SW PV E + G
Sbjct: 819 IPVSWVPVPTEHMNG 833
>SB_30778| Best HMM Match : fn3 (HMM E-Value=1.99965e-42)
Length = 823
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1
Query: 31 VTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVLS 210
+TN F Y +++ AVN G N T + ED P++ P N+++ V S S VL+
Sbjct: 67 LTNLAKFSDYSVRIVAVNLFGEGNKTQAYEFK-TAEDAPSEPPANVTVKAV-SKNSIVLA 124
Query: 211 WTPVAPESLRG 243
W P+ E G
Sbjct: 125 WEPIPKEGRNG 135
>SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2630
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +1
Query: 28 LVTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVL 207
+++ + Y ++V A KG+ +P V+ + +D P+ APGN+ + VTS TS L
Sbjct: 1688 VLSGLDAYTTYWMEVAAFTVKGSGPFSP-PVMATTDQDVPSTAPGNMRTTNVTS-TSVTL 1745
Query: 208 SWTPVAPESLRG 243
W PV RG
Sbjct: 1746 HWDPVPSRQTRG 1757
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 28 LVTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVL 207
+++ + Y ++V A KG + ++ + +D P+ APG++ ++VTS TS +
Sbjct: 1226 VLSGLDAYTTYWMEVAAFTVKGPGPFSS-PIMATTDQDVPSAAPGDIRATKVTS-TSMTI 1283
Query: 208 SWTPVAPESLRG 243
W PV RG
Sbjct: 1284 KWDPVPSHEARG 1295
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 16 QTEHLVTNTPTFQPYKIKVTAVNFKGTS-NVTPIEVIGWSGEDRPTQAPGNLSLSQVTSG 192
+++ ++ + F Y ++V A KGT P V+ + E PT AP N++ V S
Sbjct: 2298 RSDVIIRDLRLFTVYAVQVEAFTGKGTGPRSEPYRVL--TDEGVPTAAPYNITTEPVNS- 2354
Query: 193 TSAVLSWTPVAPESLRGHF 249
T+ ++ W V+ E L G+F
Sbjct: 2355 TAVIIQWYGVSKEHLFGYF 2373
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Frame = +3
Query: 369 VRILAYNGRFNGPASDTLSFVTPEGQPSTVRSFEAYPIGSSACCSSGEAHGGERRPHRLQ 548
V + A+ + GP S + T + PS++R+ ++ +S E H P + +
Sbjct: 847 VEVAAFTVKGPGPFSPPIMATTDQDAPSSMRT-------TNVTSTSLEVHWAPVPPQQAR 899
Query: 549 D-LLQQGDRHGRGDSEDRKKEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
LL + K + P + L GL+ T Y I + A T G G
Sbjct: 900 GVLLGYTVSFSSLNKTSHTKNVSPNSTQLVLRGLQAYTDYNITLSAFTNKGSG 952
Score = 28.7 bits (61), Expect = 5.4
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 3/157 (1%)
Frame = +3
Query: 294 LKEIFVESDATSALVXXXXXXXXXXVRILAYNGRFNGPASDTLSFVTPEGQPSTVRS-FE 470
++ I V D + ++ + + + +GPASD L+ +T + PS+ S
Sbjct: 1476 VQRIKVGPDTSQHMITGLQKFSSYWITVTGFTSIGDGPASDLLNVMTDQDVPSSPPSNVR 1535
Query: 471 AYPIGSSACCSSGEAHGGERRPHRLQDLLQQGDRHGRGDSEDRKKEIDPKFDRAKLAGLE 650
A GS++ + L L + G G + E P L GL+
Sbjct: 1536 ANVNGSTSIQVDWDKVPSPLVHGILMGYLVTYRKSGTGVMAE--NETAPGTTSILLTGLQ 1593
Query: 651 PNTKYRIEIRAKTKAGEG--KGYYVEQSTNNVLTAQP 755
P Y I++ A T G G G ++ +V +A P
Sbjct: 1594 PYFLYDIQVSAFTVKGCGPQSGVVSVRTEQDVPSASP 1630
>SB_53570| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 2064
Score = 44.4 bits (100), Expect = 1e-04
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 1/161 (0%)
Frame = +3
Query: 240 GALQRYKIQTWTDAEEDRLKEIFVESDATSALVXXXXXXXXXXVRILAYNGRFNGPASDT 419
G ++ Y++ D ED + F+ S S V RILAYN +GP S+
Sbjct: 474 GRIRGYRLYYSLDLLEDISQWRFMASSTNSTTVTGLTRQTTHFFRILAYNIAGDGPLSEV 533
Query: 420 LSFVTPEGQPSTVRSFEAYPIGSSACCSSGEAHGGERRPHRLQDLLQQGDRHGRGDSEDR 599
++ T +G P RS + + S+A + P D + D + +D
Sbjct: 534 VAVKTQKGVPGQPRSVQLSVLSSTAIRVTWSP------PRYPGDGIFGYDVYYNKSKQDM 587
Query: 600 KKEIDP-KFDRAKLAGLEPNTKYRIEIRAKTKAGEGKGYYV 719
I + + ++ GL P T Y++ + AK+ G G +V
Sbjct: 588 DTVIGAFQMNTKEIMGLTPYTVYKVAVAAKSDKGVGPMSFV 628
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 561 QGDRHGRGDSEDRKKEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
QG++ + K + + + L GL P T Y+IE+ A T G+G
Sbjct: 782 QGNQLRPPAQPESKDSMSEENHKVHLTGLAPETTYQIEVAAYTIKGDG 829
>SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1495
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +1
Query: 28 LVTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVL 207
+V N F YK+ + KG + E+I + ED P+ APGN+ +TS T +
Sbjct: 793 VVQNLGKFTEYKVTICGFTIKGCGAESN-ELILRTFEDVPSVAPGNVGTLNLTSMTDLRV 851
Query: 208 SWTPVAPESLRG 243
SW+ + P+ G
Sbjct: 852 SWSAIPPQHANG 863
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +1
Query: 49 FQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVLSWTPVAP 228
F Y ++ A G + + + + ED P+Q P +S T+ SW + P
Sbjct: 701 FSLYSFRILAFTSNG-NGIPSAPITAMTDEDVPSQGPTEFK-GYASSSTTLTFSWGEIPP 758
Query: 229 ESLRG 243
+S+ G
Sbjct: 759 KSIHG 763
>SB_29852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +1
Query: 16 QTEHLVTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGT 195
+T + T + Y +V A N +G + I + G+SGE P P NL + ++TS T
Sbjct: 691 KTRFTIVGTDYYVKYAFQVQAANDRGFGPKSGI-MFGFSGERYPVGRPTNLKI-EITSPT 748
Query: 196 SAVLSWTPV 222
SA+ +WT +
Sbjct: 749 SALATWTSI 757
Score = 35.5 bits (78), Expect = 0.047
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 210 LDSRGAGVTAGALQRYKIQTWTDAEEDRLKEIFVESDATSALVXXXXXXXXXXVRILAYN 389
+DSR V G L YK+ WTD + R + +S ++ V +++A+N
Sbjct: 758 VDSRE--VAGGKLLGYKVYFWTDVTDIRPGKSPFKSSIRASTVLDLDAFTSYRFQVVAFN 815
Query: 390 GRFNGPASD 416
GR +GP S+
Sbjct: 816 GRGDGPGSN 824
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 58 YKIKVTAVNFKGTS-NVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVLSWTPVAPES 234
YKI+V N +G +PI V+ +GED+P AP N+S ++S TS +SW+ + +S
Sbjct: 1022 YKIRVAGRNRRGVGIESSPIYVM--TGEDKPAIAPANISAVNLSS-TSISVSWSALPGKS 1078
Query: 235 LRG 243
+ G
Sbjct: 1079 IPG 1081
>SB_57625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1751
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +1
Query: 19 TEHLVTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTS 198
T ++ + YK++V N KG ++ E+I + ED P+Q PG++ + TS S
Sbjct: 888 TSDVIDGLAKWSSYKVQVRVYNDKGDGPLSN-ELIVRTKEDAPSQPPGSVKVI-ATSSKS 945
Query: 199 AVLSWTPVAPESLRG 243
+SW+ +S+ G
Sbjct: 946 VRISWSLPPLDSIHG 960
>SB_5079| Best HMM Match : fn3 (HMM E-Value=1.3e-35)
Length = 978
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 28 LVTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVL 207
+V+N F Y IKV + G P V+ + ED P+ P N+ + + + ++ ++
Sbjct: 185 VVSNLQEFTEYSIKVVGLTKDGIGPSNPA-VVAKTKEDVPSAPPDNMIIQDMFNISTIIV 243
Query: 208 SWTPV 222
W+PV
Sbjct: 244 KWSPV 248
>SB_1850| Best HMM Match : fn3 (HMM E-Value=7.5e-22)
Length = 461
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 VTAVNFKGTSNVT-PIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVLSWTPVAPESLRG 243
+T F N + V+ W+ E P+ P N++++ VTS T+ L W PV E G
Sbjct: 268 ITVAGFTAAGNGSWSAPVVCWTAEAAPSSYPSNITITNVTS-TTLSLQWGPVPAEYRNG 325
>SB_26361| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1898
Score = 35.9 bits (79), Expect = 0.036
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 25 HLVTNTPTFQPYKIKVTAVNF--KGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTS 198
+ VT + Y I + A N KGTSNVT + V + +D P Q P ++ +Q T
Sbjct: 688 YTVTGLMRYTRYTISIKAYNLNGKGTSNVTKL-VYFVTDQDAPDQPPSSVR-AQAQGSTQ 745
Query: 199 AVLSWTPVAPE 231
+ W P+ PE
Sbjct: 746 ILAEWGPI-PE 755
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 300 EIFVESDATSALVXXXXXXXXXXVRILAYNGRFNGPASDTLSFVTPEG--QPSTVRSFEA 473
++ E AT V V++ AYN +GP S ++ T EG P ++
Sbjct: 98 KVITEGAATQGTVDGLLLWTEYEVKVQAYNNAGSGPFSSSVIVTTGEGGSAPCIIKLIVF 157
Query: 474 YPIGSSACCSSGE 512
+ S C+ E
Sbjct: 158 IALSSHRACAKPE 170
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 636 LAGLEPNTKYRIEIRAKTKAGEG--KGYYVE 722
+ GL PNT Y + + AKT AG G K YV+
Sbjct: 387 VTGLNPNTWYTVTVAAKTGAGLGPEKKLYVQ 417
>SB_3684| Best HMM Match : fn3 (HMM E-Value=8e-11)
Length = 862
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 594 DRKKEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEGKGYYVEQSTNNVLTAQP 755
DRK + ++GL P T YR + A + GEG Y+ +TN P
Sbjct: 11 DRKLVNTTDLHQITVSGLHPGTAYRFSVAAYNEIGEGPAAYIAITTNGAQVGAP 64
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 35.1 bits (77), Expect = 0.062
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 49 FQPYKIKVTAVNFKGTSNVTPIE-VIGWSGEDRPTQAPGNLSLSQVTSGTSAVLSWTPVA 225
F Y I+V N G TP++ V + ED P+ P N++ + TS TS ++ W+PV
Sbjct: 934 FVTYAIQVAGFNKAGEG--TPLKSVFVTTNEDVPSFPPENITAAN-TSSTSLLIQWSPVP 990
Query: 226 PESLRG 243
+ G
Sbjct: 991 KDHANG 996
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +3
Query: 240 GALQRYKIQTWTDAEEDRLKEIFVESDATSALVXXXXXXXXXXVRILAYNGRFNGPASDT 419
G + YKI E +D T+ V V ++A+ + +GP S+
Sbjct: 996 GIILGYKILYRVSGSNGSFSEHRTNADTTATEVTNLTHFTVYDVSVVAFTSKGDGPGSEP 1055
Query: 420 LSFVTPEGQPS 452
L T E +PS
Sbjct: 1056 LIVKTAENRPS 1066
>SB_17577| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1690
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +1
Query: 58 YKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVLSWTPV 222
Y ++ A + KG ++P + G SGE+ P + P N++ S T+ T+ ++W +
Sbjct: 549 YTFRLLAYSLKGDGFISP-PIYGMSGENVPQEVPNNIT-SVATNSTALNVTWAHI 601
>SB_38971| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2436
Score = 33.9 bits (74), Expect = 0.14
Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 3/171 (1%)
Frame = +3
Query: 201 RAQLDSRGAGVTAGALQRYKIQTWTDAEEDRLKEIFVESDATSALVXXXXXXXXXXVRIL 380
R D + G L Y + ++T ++ + AL+ +++
Sbjct: 2072 RVSWDQVPPSLVHGTLLGYSV-SFTKRGNGTMRTVKTAPAKLEALLTGLQAYSMYEIQVC 2130
Query: 381 AYNGRFNGPASDTLSFVTPEGQPSTVRSFEAY-PIGSSACCSSGEAHGGERRPHRLQDLL 557
A+ + GP S +S +T E PS + P+ S+A + + L +L
Sbjct: 2131 AFTAKGFGPKSRVISVMTDEDVPSAAPTIVGIEPVNSTAVIVQWTSVS----KNHLNGVL 2186
Query: 558 QQGDRHGRGDSEDRKKEIDPKFD--RAKLAGLEPNTKYRIEIRAKTKAGEG 704
+ G D +E+ + + R L G+ P +Y++++ A T+ G+G
Sbjct: 2187 K-GYVVTYSGQFDGSRELSVRINSVRVVLGGISPGFEYKVQVAAFTRIGDG 2236
>SB_12046| Best HMM Match : fn3 (HMM E-Value=0)
Length = 652
Score = 33.9 bits (74), Expect = 0.14
Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 3/171 (1%)
Frame = +3
Query: 201 RAQLDSRGAGVTAGALQRYKIQTWTDAEEDRLKEIFVESDATSALVXXXXXXXXXXVRIL 380
R D + G L Y + ++T ++ + AL+ +++
Sbjct: 288 RVSWDQVPPSLVHGTLLGYSV-SFTKRGNGTMRTVKTAPAKLEALLTGLQAYSMYEIQVC 346
Query: 381 AYNGRFNGPASDTLSFVTPEGQPSTVRSFEAY-PIGSSACCSSGEAHGGERRPHRLQDLL 557
A+ + GP S +S +T E PS + P+ S+A + + L +L
Sbjct: 347 AFTAKGFGPKSRVISVMTDEDVPSAAPTIVGIEPVNSTAVIVQWTSVS----KNHLNGVL 402
Query: 558 QQGDRHGRGDSEDRKKEIDPKFD--RAKLAGLEPNTKYRIEIRAKTKAGEG 704
+ G D +E+ + + R L G+ P +Y++++ A T+ G+G
Sbjct: 403 K-GYVVTYSGQFDGSRELSVRINSVRVVLGGISPGFEYKVQVAAFTRIGDG 452
>SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 58 YKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVLSWTPVAPESL 237
Y + ++A GT + ++ SGE P AP N++ + S TS + W P+ P
Sbjct: 1403 YTVSLSAFTRVGTGPWSQRYLVT-SGEQEPQDAPANIT-ATAESSTSIRVRWDPIDPSRT 1460
Query: 238 RG 243
RG
Sbjct: 1461 RG 1462
>SB_3077| Best HMM Match : fn3 (HMM E-Value=8e-28)
Length = 465
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 58 YKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVLSWTPVAPESL 237
Y ++V A KG T E+ + E P P + S + L WTP+ PE+L
Sbjct: 69 YTMQVAAFTLKGVGPWTS-EIEVTTDEAAPAYPPEDFR-GHFASSVAVKLYWTPIPPETL 126
Query: 238 RG 243
RG
Sbjct: 127 RG 128
>SB_1171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1415
Score = 32.7 bits (71), Expect = 0.33
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Frame = +3
Query: 384 YNGRFNGPASDTLSFVTPEGQPS-TVRSFEAYPIGSSACCSSGEAHGGERRPHRLQDLLQ 560
Y GP S+ + F T E PS R P+ + S E R R+
Sbjct: 392 YRNDDTGPYSEPIVFTTDEDVPSGPPRDVIIEPLKQGSIRVSWSVPDLEHRNGRIVKYEV 451
Query: 561 QGDRHGRGDSEDRKKEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
Q G S K + + + ++ GL+P KY++ +RA T+ G G
Sbjct: 452 QYALKG---SAVLKTSLTQQLQK-EINGLDPKGKYKVSVRAHTRIGPG 495
>SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39)
Length = 2865
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 615 PKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
P +LAGLEP + Y I IRA T G G
Sbjct: 2042 PDVTETRLAGLEPFSAYEISIRAFTSIGNG 2071
>SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35)
Length = 1171
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 393 RFNGPASDTLSFVTPEGQPSTVRSFEAYPIG-SSACCSSGEAHGGERRP 536
RF+GP+S + + +P T R +PI SS C+ E +G E P
Sbjct: 962 RFDGPSSSDAAHIDRPRRPRTARYVRFWPIEFSSQMCARVEIYGREASP 1010
>SB_57926| Best HMM Match : I-set (HMM E-Value=3.5e-39)
Length = 788
Score = 31.5 bits (68), Expect = 0.76
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 16 QTEHLVTNTPTFQPYKIKVTAVNFKGT---SNVTPIEVIGWSGEDRPTQAPGNLSLSQVT 186
Q ++T+ F YK +V AVN GT S+ TP + +S P+ AP ++ Q +
Sbjct: 644 QVAAVITDLSPFTRYKFRVRAVNEVGTGLPSDATPF-ITTFSAP--PSGAPTSVK-GQPS 699
Query: 187 SGTSAVLSWTPVAPESLRG 243
+ + V+SW P ++ G
Sbjct: 700 AAQAFVVSWQPPPADTHNG 718
>SB_19802| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1075
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 369 VRILAYNGRFNGPASDTLSFVTPEGQPSTVRSFEAYPIGSS 491
+R+ + G + +L ++TPE QPS+ R+F A I SS
Sbjct: 652 IRVAGVTSKGRGHEA-SLDYLTPEAQPSSPRNFTALAINSS 691
>SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 579 RGDSEDRKKEIDPKFDR--AKLAGLEPNTKYRIEIRAKTKAGEG 704
RG D ++ DR + + L+P+T+YRIE+ A T G G
Sbjct: 120 RGAGNDTTLHVNVTIDRNTSVITDLQPSTEYRIEVSAFTGGGYG 163
>SB_24585| Best HMM Match : Integrase (HMM E-Value=7.9)
Length = 124
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 627 RAKLAGLEPNTKYRIEIRAKTKAGEGKG-YYVEQSTNNVLTAQP 755
R L GLEP T Y+I + T G+G G + E +T ++ +P
Sbjct: 28 RMTLHGLEPLTTYKIWVAGFTSKGKGPGSKHTEATTLKIVPGKP 71
>SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 508 EKPMEENGVLTGYKIYYSKVIA 573
+ PME NG++ Y++ YSKV++
Sbjct: 623 DTPMEPNGIIREYRVLYSKVVS 644
>SB_43390| Best HMM Match : fn3 (HMM E-Value=9.3e-30)
Length = 1043
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 633 KLAGLEPNTKYRIEIRAKTKAGEGK 707
+++GL P T+Y +IRA T GEG+
Sbjct: 536 EISGLVPGTRYEFKIRALTLCGEGE 560
>SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 57 LQDQGDGGELQRNIERDSH*SDRLVRRGP---THSGSGQPQPVPGD-VRHQRR 203
+QD+ D G IER+ S+ VRR P + G P VPGD R RR
Sbjct: 198 VQDEYDPGTAHTTIEREYATSEAYVRRAPGSQSSEGPRTPSYVPGDEYRSPRR 250
>SB_5758| Best HMM Match : fn3 (HMM E-Value=6.6e-18)
Length = 1191
Score = 30.3 bits (65), Expect = 1.8
Identities = 41/163 (25%), Positives = 62/163 (38%), Gaps = 8/163 (4%)
Frame = +3
Query: 240 GALQRYKIQTWTDAEEDRLKEIFVES--DATSALVXXXXXXXXXXVRILAYNGRFNGPAS 413
G +Q Y + T+ + + ++ VES D S ++ VRILA+ NGP S
Sbjct: 846 GVIQGYLLNL-TNLNKTKAPDVVVESGSDVISMVISGLEKLTLYCVRILAFTEVGNGPYS 904
Query: 414 DTLSFV--TPEGQPSTVRSFEAYPIGSSACCSSGEAHGGERRPHRLQDLLQQGDRHGRG- 584
D + T + P+ + P A EA G H L G
Sbjct: 905 DCYEVLTWTEDYLPTMTITNRTSPY---ALDIQWEALPGYLLGHLTGYALSYTPVSKTGV 961
Query: 585 ---DSEDRKKEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
++ R I + ++AGL T YR+ +R T G G
Sbjct: 962 KVTGAKPRLVNITANTTQYRIAGLSAYTTYRVLVRPLTSTGLG 1004
>SB_58111| Best HMM Match : fn3 (HMM E-Value=0)
Length = 934
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +3
Query: 579 RGDSE----DRKKEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
RGDSE R++ I +AGLEP + Y+I +RA T G G
Sbjct: 149 RGDSELRSRRRRRSIQSVERNYTIAGLEPYSLYQIAVRAFTIKGYG 194
>SB_99| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 591 EDRKKEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEGK 707
++ ++++ +++GL P T+Y +IRA T G+G+
Sbjct: 367 QETEEQVSRTATTREISGLVPGTRYEFKIRALTLCGDGE 405
>SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1189
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/92 (25%), Positives = 41/92 (44%)
Frame = +3
Query: 429 VTPEGQPSTVRSFEAYPIGSSACCSSGEAHGGERRPHRLQDLLQQGDRHGRGDSEDRKKE 608
+ P+G P+ + + +A G++ S H ++ L+ G + + E
Sbjct: 555 IVPKGPPTGL-TLQAAQSGTALIVSWNPPHHSLANGRIIKYALEY---RRSGKTMFNRVE 610
Query: 609 IDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
+ DR + L+PNTKY + I A T +G G
Sbjct: 611 LGDVLDRT-ITRLQPNTKYEVRIAAGTSSGFG 641
>SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11)
Length = 1033
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 64 IKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVLSWTPV 222
+K+ A++ G + I V G+SG+D+P +P L ++ VT + L+W V
Sbjct: 626 VKLQAISPVGAGPESAI-VSGYSGQDKPNVSPTQLIITNVTE-RAVSLTWDNV 676
>SB_2034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1003
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 597 RKKEIDPKFDRAKLAG-LEPNTKYRIEIRAKTKAGEGK 707
++ ID K KL + NTKY + I+A+ KAG G+
Sbjct: 383 KEATIDDKKQMFKLESKFQRNTKYNVSIQARNKAGPGE 420
>SB_58926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2371
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 618 KFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
KF L GL NT Y ++IRA + GEG
Sbjct: 1749 KFRSRILKGLRANTTYSVQIRAVSIVGEG 1777
>SB_51115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1088
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +1
Query: 49 FQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVLSWTPVAP 228
F Y + KG ++ + V + ED P+ P L + +TS ++ L+W+PV
Sbjct: 518 FTEYTLAACGYTSKGCGVISHVTVR--THEDVPSLPPQQLFAANLTSQSTITLTWSPVPR 575
Query: 229 ESLRG 243
+ G
Sbjct: 576 GHVNG 580
>SB_42991| Best HMM Match : fn3 (HMM E-Value=7.2e-08)
Length = 769
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +3
Query: 324 TSALVXXXXXXXXXXVRILAYNGRFNGPASDTLSFVTPEGQPSTVRSFEAYPIGSSA 494
T A++ +++AY +GP SD +S T P + AYP +++
Sbjct: 694 THAVIYDLLPATKYYFKVMAYTAVGDGPFSDVVSATTNSTAPGIPENLHAYPTSATS 750
>SB_9051| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 1831
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 615 PKFDRAKLAGLEPNTKYRIEIRAKTKAGEGKGYYVEQSTNNVLTAQP 755
P + L GL P T YR+ + A ++ G G +E T + L +P
Sbjct: 343 PNVTSSDLEGLAPYTNYRVRVCAVSEVGRGLEGVIEFVTLSSLPERP 389
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 636 LAGLEPNTKYRIEIRAKTKAGEG 704
L GLEP T+Y I ++A T G+G
Sbjct: 1733 LGGLEPYTEYVITVKAYTNIGDG 1755
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 29.1 bits (62), Expect = 4.1
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Frame = +3
Query: 456 VRSFEAYPIGSSACCSSGEAHGGER-----RPHRLQD------LLQQGDRHGRGDSEDRK 602
+RS + P G SA S+ GG P LQ+ +++ D G+ D +
Sbjct: 1770 MRSGQGDPQGLSAPTSAVPLKGGRTASVTWNPPTLQNGLITHYVIRAYDAFASGNPVDFR 1829
Query: 603 KEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEGKG 710
DP + L P T YR+++ A T+ G +G
Sbjct: 1830 VS-DPALLNVTITNLTPYTTYRVQVAAYTQGGSAEG 1864
>SB_55420| Best HMM Match : fn3 (HMM E-Value=0)
Length = 789
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 369 VRILAYNGRFNGPASDTLSFVTPEGQPS 452
VR+ AYN G SD +S +T E PS
Sbjct: 403 VRVTAYNSAGEGRGSDVISVMTDEDAPS 430
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 145 PTQAPGNLSLSQVTSGTSAVLSWTPVAPESLRGHFK 252
P+ P NL+ VT TS LSW P+A + G K
Sbjct: 16 PSSPPVNLTAINVTK-TSITLSWGPIAEKHKNGIIK 50
>SB_40750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 633 KLAGLEPNTKYRIEIRAKTKAGEG 704
+++GLEPN+ Y +E+ A T G G
Sbjct: 14 EISGLEPNSAYSVEVAAFTIKGSG 37
>SB_9448| Best HMM Match : fn3 (HMM E-Value=2.4e-09)
Length = 195
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 130 SGEDRPTQAPGNLSLSQVTSGTSAVLSWTPVAPESLRG 243
+GED P AP ++S++ V+ G ++ W+ + P + G
Sbjct: 91 TGEDAPGVAPNSVSVTNVSVGV-VLVEWSAIDPVHILG 127
>SB_19290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 642 GLEPNTKYRIEIRAKTKAG 698
GLEP+T YR IR K AG
Sbjct: 67 GLEPSTDYRYRIRCKNDAG 85
>SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17)
Length = 321
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 597 RKKEIDPKFDRAK-LAGLEPNTKYRIEIRAKTKAGEG 704
R E D R+K +AGL NT Y EIRA + G G
Sbjct: 119 RLSETDGSGSRSKVIAGLLANTSYTAEIRAIHRFGRG 155
>SB_20375| Best HMM Match : fn3 (HMM E-Value=3e-35)
Length = 320
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 588 SEDRKKEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
S R++ I +AGLEP + Y+I +RA T G G
Sbjct: 156 SRRRRRSIQSVERNYTIAGLEPYSLYQIAVRAFTIKGYG 194
>SB_6778| Best HMM Match : fn3 (HMM E-Value=0.13)
Length = 464
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 636 LAGLEPNTKYRIEIRAKTKAGEGK 707
L L P T+Y +RA T+ GEG+
Sbjct: 62 LTRLVPGTRYEFRVRAVTECGEGR 85
>SB_38614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 636 LAGLEPNTKYRIEIRAKTKAGEGK 707
L L P T+Y +RA T+ GEG+
Sbjct: 30 LTRLVPGTRYEFRVRAVTECGEGR 53
>SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +3
Query: 492 ACCSSGEAHGGERRPHRLQDLLQQGDRHGRGDSEDRKKEIDPKFDRAKLAGL 647
AC S G G R PH+ QQG + P F +LAG+
Sbjct: 734 ACASQGYPFSGTRMPHQANWPTQQGTKAVPSSMPSLPSMPGPAFQVPQLAGM 785
>SB_32103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 135 RGPTHSGSGQPQPVPGDVRHQRRAQLDSRGAGVTAGALQRYKIQTWTDAEEDRL 296
R H G Q Q +P R QR++Q+ A + +YKI WT E D L
Sbjct: 156 RARYHGGKRQSQ-IP---REQRKSQIPPWTAQKPYPPVDKYKIAPWTAPEPDFL 205
>SB_6306| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-05)
Length = 471
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = +1
Query: 25 HLVTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAV 204
+LV NT T+ Y ++ S + + +IG+ + T+ P L+ S
Sbjct: 191 YLVCNTSTYAVYLSRIVIHYAASFSTLATLNMIGYDRYEALTKFPAQRKLTITRSCVFVA 250
Query: 205 LSW 213
L+W
Sbjct: 251 LAW 253
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 508 EKPMEENGVLTGYKIYY 558
+KP++ NG++T Y IYY
Sbjct: 1373 DKPLQPNGIITEYIIYY 1389
>SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2021
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 49 FQPYKIKVTAVNFKGTSNVTPIEVIGWSGEDRPTQAPGNLSLSQVTSGTSAVLSWTPVAP 228
+ Y I V A G V ++ + ED PTQAP + S T ++W+PV
Sbjct: 1692 YTEYTITVLAFTRIG-DGVESGQIYVRTDEDIPTQAPPSASSIDRDGPTHIPITWSPVHS 1750
Query: 229 ESLRG 243
+ G
Sbjct: 1751 GQIHG 1755
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.128 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,226,488
Number of Sequences: 59808
Number of extensions: 324179
Number of successful extensions: 1156
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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