Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00231
(756 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 31 0.012
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 29 0.036
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 29 0.047
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 27 0.25
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 27 0.25
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 5.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.4
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 9.4
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 31.1 bits (67), Expect = 0.012
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 630 AKLAGLEPNTKYRIEIRAKTKAGEGK 707
A GL+P+T Y I++RAKT G G+
Sbjct: 480 ATFKGLKPSTDYAIQVRAKTTRGWGE 505
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 29.5 bits (63), Expect = 0.036
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Frame = +3
Query: 369 VRILAYNGRFNGPASDTLSFVT----PEGQPSTVR--SFEAYPIGSSACCSSGEAHGGER 530
+RI+A N SDT++ +T P G P+++R + + + + E GE
Sbjct: 950 LRIVAENEIGASDPSDTVTIITAEEAPSGPPTSIRVDDLDQHTLKVTWKPPPREDWNGEI 1009
Query: 531 RPHRLQDLLQQGDRHGRGDSEDRKKEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 704
+ + L ++ ++ D KE D K ++ L+ T+Y + ++A K G G
Sbjct: 1010 LGYYVGYRLSSSEKPYMFETVDFSKE-DGKEHHLQIMNLKTYTQYSVVVQAFNKVGSG 1066
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 636 LAGLEPNTKYRIEIRAKTKAGEG 704
L GL+ T Y +++ A T G+G
Sbjct: 1143 LHGLKKYTNYSMQVLAFTSGGDG 1165
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1
Query: 526 NGVLTGYKI 552
NGV+TGYK+
Sbjct: 1111 NGVITGYKV 1119
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 29.1 bits (62), Expect = 0.047
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 140 SSPDQPITSMGVTFDVPLKFTAVTLIL*GWKV 45
+ PDQ I +TFD+P + + I+ GW++
Sbjct: 98 AEPDQKIEINFITFDIPCEHRGLVSIIDGWEL 129
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 26.6 bits (56), Expect = 0.25
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 633 KLAGLEPNTKYRIEIRAKTKAGEG 704
+L GL P TKY + ++A + G G
Sbjct: 1073 RLTGLRPYTKYTLVVQAYNQVGSG 1096
Score = 25.4 bits (53), Expect = 0.58
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 526 NGVLTGYKIYYSKVIA 573
NG++ GYK++Y ++A
Sbjct: 1141 NGIIQGYKLHYEPILA 1156
Score = 24.6 bits (51), Expect = 1.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 636 LAGLEPNTKYRIEIRAKTKAGEG 704
L GL T Y I++ A T+ G+G
Sbjct: 1177 LTGLRKYTNYTIQVLAFTRVGDG 1199
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 514 PMEENGVLTGYKIY 555
P+E NG++T Y +Y
Sbjct: 1237 PLEPNGIITKYNLY 1250
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.6 bits (56), Expect = 0.25
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 633 KLAGLEPNTKYRIEIRAKTKAGEG 704
+L GL P TKY + ++A + G G
Sbjct: 1069 RLTGLRPYTKYTLVVQAYNQVGSG 1092
Score = 25.4 bits (53), Expect = 0.58
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 526 NGVLTGYKIYYSKVIA 573
NG++ GYK++Y ++A
Sbjct: 1137 NGIIQGYKLHYEPILA 1152
Score = 24.6 bits (51), Expect = 1.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 636 LAGLEPNTKYRIEIRAKTKAGEG 704
L GL T Y I++ A T+ G+G
Sbjct: 1173 LTGLRKYTNYTIQVLAFTRVGDG 1195
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 514 PMEENGVLTGYKIY 555
P+E NG++T Y +Y
Sbjct: 1233 PLEPNGIITKYNLY 1246
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 651 PNTKYRIEIRAKTKAGEG 704
PN + R ++R K ++GEG
Sbjct: 391 PNRRARGQLRTKIESGEG 408
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 257 QNPDLDRRRGGPAQGDLCG 313
+NP +R GGP G G
Sbjct: 402 ENPVTQKREGGPPTGATTG 420
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 257 QNPDLDRRRGGPAQGDLCG 313
+NP +R GGP G G
Sbjct: 422 ENPVTQKREGGPPTGATTG 440
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 257 QNPDLDRRRGGPAQGDLCG 313
+NP +R GGP G G
Sbjct: 371 ENPVTQKREGGPPTGATTG 389
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 202 VLSWTPVAPESLRGHF 249
VLSWTP S+ G F
Sbjct: 284 VLSWTPYGVMSMIGAF 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.312 0.128 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,904
Number of Sequences: 438
Number of extensions: 2832
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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