Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00230
         (815 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q65ZX9 Cluster: Putative uncharacterized protein; n=3; ...    33   6.5  

>UniRef50_Q65ZX9 Cluster: Putative uncharacterized protein; n=3;
            Borrelia burgdorferi group|Rep: Putative uncharacterized
            protein - Borrelia garinii
          Length = 1466

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
 Frame = -2

Query: 646  FKVLNDKIERAYEANLSLQNLTKWMAFNMT*LTYNKDLI*YYYDKGLYALMICDRVPY-- 473
            F   + K +  + +NL+++    +  FNMT + Y+   + Y+Y  G Y+ ++ D +P   
Sbjct: 890  FSFRDIKYKDEFLSNLTVEFSNDFEKFNMTSIDYDLINVLYHYSSGEYSFILKDYLPLSF 949

Query: 472  -HHGKIKRYLLRGQLNYI*YNNRV 404
               GKI +  + G +  I +++++
Sbjct: 950  NSSGKIIKNKILGNVRDIKFDSKI 973


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,439,795
Number of Sequences: 1657284
Number of extensions: 12437510
Number of successful extensions: 19873
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 19331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19873
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)