Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00229
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    25   0.58 
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    25   0.58 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   4.1  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    22   5.4  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    22   5.4  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   7.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.4  

>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 503 RHSYKGCDCETKERDRETENCLAPGQKYSRNSYRNN 610
           R + KG   +  ER+R  E  +     Y+  +Y NN
Sbjct: 282 RETSKGRSRDRTERERSKETKIISSNNYNYKNYNNN 317


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 503 RHSYKGCDCETKERDRETENCLAPGQKYSRNSYRNN 610
           R + KG   +  ER+R  E  +     Y+  +Y NN
Sbjct: 293 RETSKGRSRDRTERERSKETKIISSNNYNYKNYNNN 328


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +1

Query: 88  TFLKSLKVWVREFAI-RSSAL 147
           T  K +K+W+  FAI R SA+
Sbjct: 389 TIPKEMKIWIPAFAIHRDSAI 409


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 182 SFSLLEYVDCWTSADDRIANSLTHTFKL 99
           SF L +  D WT       N+ T TFK+
Sbjct: 36  SFELSKNGDEWTFTSSSGDNTYTKTFKM 63


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 182 SFSLLEYVDCWTSADDRIANSLTHTFKL 99
           SF L +  D WT       N+ T TFK+
Sbjct: 38  SFELSKNGDEWTFTSSSGDNTYTKTFKM 65


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 382 NYRLIRRKTHEVKCTKAIKCTMQKFK 305
           NY  I  +  +  C K I C+ +KF+
Sbjct: 74  NYLGICAEGMQCSCNKCIGCSAEKFE 99


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = -2

Query: 337 KAIKCTMQKFKMGHLTRYGMFSVKLYRSSHSALLRRSI*FYSSSFDSELSTS 182
           +A+   MQ  K G L R  +F++      H A++   + + + +FD   +T+
Sbjct: 75  EAVNEFMQLLKHGMLPRGQVFTMMNKEMRHQAVVLFRLLYSAKTFDVFYNTA 126


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 696 QPYFFKIPDYSSIVLLAFEDI 634
           Q Y+  +P+YSS +++   +I
Sbjct: 269 QLYYPHVPEYSSSIIMELHNI 289


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 696 QPYFFKIPDYSSIVLLAFEDI 634
           Q Y+  +P+YSS +++   +I
Sbjct: 284 QLYYPHVPEYSSSIIMELHNI 304


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = -2

Query: 337 KAIKCTMQKFKMGHLTRYGMFSVKLYRSSHSALLRRSI*FYSSSFDSELSTS 182
           +A+   MQ  K G L R  +F++      H A++   + + + +FD   +T+
Sbjct: 75  EAVNEFMQLLKHGMLPRGQVFTMMNKEMRHQAVVLFRLLYSAKTFDVFYNTA 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,397
Number of Sequences: 438
Number of extensions: 4263
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)