Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00228
         (622 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF173550-1|AAL29185.1|  165|Drosophila melanogaster Tsunagi prot...    83   2e-16
AE013599-786|AAF58987.1|  165|Drosophila melanogaster CG8781-PA ...    83   2e-16
AY071005-1|AAL48627.1|  165|Drosophila melanogaster RE09075p pro...    81   9e-16

>AF173550-1|AAL29185.1|  165|Drosophila melanogaster Tsunagi
           protein.
          Length = 165

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 53/123 (43%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
 Frame = +1

Query: 256 ADVLDIENSEEFEVDEDGEQXXXXXXXXXXXXXXXXXXNEAGGGSAAERGNRGRYDSLAP 435
           ADVLDI+N+EEFEVDEDG+Q                  +++    A     R R +    
Sbjct: 2   ADVLDIDNAEEFEVDEDGDQGIVRLKEKAKHRKGRGFGSDSNTREAIHSYERVRNE---- 57

Query: 436 EGDSGTPGPQRSVEGWILLSVXXXXXXXXXXXXXIFRVW*D-KNIPLNLDRRTGFLKGYA 612
           + D   PGPQRSVEGWIL                 F  + + KNI LNLDRRTGF KGYA
Sbjct: 58  DDDELEPGPQRSVEGWILFVTSIHEEAQGDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYA 117

Query: 613 LVE 621
           LVE
Sbjct: 118 LVE 120


>AE013599-786|AAF58987.1|  165|Drosophila melanogaster CG8781-PA
           protein.
          Length = 165

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 53/123 (43%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
 Frame = +1

Query: 256 ADVLDIENSEEFEVDEDGEQXXXXXXXXXXXXXXXXXXNEAGGGSAAERGNRGRYDSLAP 435
           ADVLDI+N+EEFEVDEDG+Q                  +++    A     R R +    
Sbjct: 2   ADVLDIDNAEEFEVDEDGDQGIVRLKEKAKHRKGRGFGSDSNTREAIHSYERVRNE---- 57

Query: 436 EGDSGTPGPQRSVEGWILLSVXXXXXXXXXXXXXIFRVW*D-KNIPLNLDRRTGFLKGYA 612
           + D   PGPQRSVEGWIL                 F  + + KNI LNLDRRTGF KGYA
Sbjct: 58  DDDELEPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYA 117

Query: 613 LVE 621
           LVE
Sbjct: 118 LVE 120


>AY071005-1|AAL48627.1|  165|Drosophila melanogaster RE09075p
           protein.
          Length = 165

 Score = 81.4 bits (192), Expect = 9e-16
 Identities = 52/123 (42%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
 Frame = +1

Query: 256 ADVLDIENSEEFEVDEDGEQXXXXXXXXXXXXXXXXXXNEAGGGSAAERGNRGRYDSLAP 435
           ADVLDI+N+EEFEVDEDG+Q                  +++    A     R R +    
Sbjct: 2   ADVLDIDNAEEFEVDEDGDQGIVRLKEKAKHRKGRGFGSDSNTREAIHSYERVRNE---- 57

Query: 436 EGDSGTPGPQRSVEGWILLSVXXXXXXXXXXXXXIFRVW*D-KNIPLNLDRRTGFLKGYA 612
           + D   PGPQRSVEGWIL                 F  + + K+I LNLDRRTGF KGYA
Sbjct: 58  DDDELEPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKSIHLNLDRRTGFSKGYA 117

Query: 613 LVE 621
           LVE
Sbjct: 118 LVE 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,543,860
Number of Sequences: 53049
Number of extensions: 259789
Number of successful extensions: 967
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)