Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00227
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   3.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   3.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 571 LESKLCFYIFLTFISNTEPLTPIATRFDISISSTFRVIRKVASWIL 708
           +E K   Y F  F+S   P    A  FDI  S+   V+    ++++
Sbjct: 300 MEEKQELYEFSNFVSQHLPKFSAANFFDIERSTILSVLGTACTFLI 345


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +1

Query: 535 GFIASHKFGLKPLESKLCFYIFLTFISNTEPLTPIATRFDISISSTFRVIRKVASWIL 708
           G + S    LK +E+   F  F+T + +  P+   A  + I+ S+ FR+   + ++++
Sbjct: 265 GAVYSLDLELKHIEN---FNDFVTALKDNVPVFAAARFYAINRSTIFRMFNAIVTFLI 319


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +1

Query: 535 GFIASHKFGLKPLESKLCFYIFLTFISNTEPLTPIATRFDISISSTFRVIRKVASWIL 708
           G + S    LK +E+   F  F+T + +  P+   A  + I+ S+ FR+   + ++++
Sbjct: 265 GAVYSLDLELKHIEN---FNDFVTALKDNVPVFAAARFYAINRSTIFRMFNAIVTFLI 319


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +1

Query: 535 GFIASHKFGLKPLESKLCFYIFLTFISNTEPLTPIATRFDISISSTFRVIRKVASWIL 708
           G + S    LK +E+   F  F+T + +  P+   A  + I+ S+ FR+   + ++++
Sbjct: 585 GAVYSLDLELKHIEN---FNDFVTALKDNVPVFAAARFYAINRSTIFRMFNAIVTFLI 639


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 599 NM*KHNFDSSGLSPNLCDAMNPDLSNSPIRQ 507
           N   HN+ +   +P     M PD  NS   Q
Sbjct: 294 NTSSHNYYAQNYAPTYYGQMQPDYLNSQTTQ 324


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = +2

Query: 500 TAFVLLVNWTNQDSLHHINLDLNHSSQSY 586
           T  V+L+ + N D +   + + +++++SY
Sbjct: 358 TYLVILIQFNNSDFVQRNSTEFDNATESY 386


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 364 MRTMKFFFLLCNI 402
           +R++ FF+ +CNI
Sbjct: 11  IRSLSFFYKICNI 23


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 364 MRTMKFFFLLCNI 402
           +R++ FF+ +CNI
Sbjct: 11  IRSLSFFYKICNI 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,648
Number of Sequences: 336
Number of extensions: 3416
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)