Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00226
(658 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 179 5e-44
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 176 3e-43
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 157 2e-37
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 148 1e-34
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 109 4e-23
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 77 4e-13
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 77 5e-13
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 76 7e-13
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 75 2e-12
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 75 2e-12
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 73 5e-12
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 72 1e-11
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 70 4e-11
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 69 1e-10
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 69 1e-10
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 66 7e-10
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 64 2e-09
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 63 5e-09
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 63 7e-09
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 62 9e-09
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 58 1e-07
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 49 1e-04
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 42 0.017
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 42 0.017
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 40 0.040
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 40 0.040
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 40 0.069
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 37 0.49
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 37 0.49
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 36 1.1
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 36 1.1
UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n... 35 2.0
UniRef50_Q6R7Z5 Cluster: Cathepsin B-like cysteine protease; n=8... 34 2.6
UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep: ... 34 2.6
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 34 2.6
UniRef50_Q11UJ1 Cluster: Endoglucanase, glycoside hydrolase fami... 33 4.6
UniRef50_A1IRF2 Cluster: Putative uncharacterized protein; n=3; ... 33 4.6
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 33 4.6
UniRef50_A2E755 Cluster: Dynein heavy chain family protein; n=2;... 33 4.6
UniRef50_Q4SFT0 Cluster: Chromosome 7 SCAF14601, whole genome sh... 33 6.0
UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77; Bacteri... 33 6.0
UniRef50_Q66106 Cluster: Coat protein; n=21; Ilarvirus subgroup ... 33 8.0
UniRef50_Q080D5 Cluster: Putative uncharacterized protein precur... 33 8.0
UniRef50_O52507 Cluster: Serrawettin synthase; n=1; Serratia liq... 33 8.0
UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong sub-... 33 8.0
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 33 8.0
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 179 bits (436), Expect = 5e-44
Identities = 91/117 (77%), Positives = 98/117 (83%), Gaps = 4/117 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 59 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 118
Query: 436 YDPSIGIYGLDFYVVLGGQ-VST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYDG 594
YDPSIGIYGLDFYVVLG S KK R++G H KE+AM+WFQQKYDG
Sbjct: 119 YDPSIGIYGLDFYVVLGRPGFSIADKK---RRTGCIGAKHRISKEEAMRWFQQKYDG 172
Score = 95.1 bits (226), Expect = 1e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 58
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 176 bits (429), Expect = 3e-43
Identities = 90/117 (76%), Positives = 97/117 (82%), Gaps = 4/117 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 113 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 172
Query: 436 YDPSIGIYGLDFYVVLG-GQVST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYDG 594
YDPSIGIYGLDFYVVLG S KK R++G H KE+AM+WFQQKY G
Sbjct: 173 YDPSIGIYGLDFYVVLGRSGFSIADKK---RRTGCIGAKHRISKEEAMRWFQQKYAG 226
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 157 bits (382), Expect = 2e-37
Identities = 79/115 (68%), Positives = 90/115 (78%), Gaps = 3/115 (2%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
+FGIRRNEKIAVH TVRG KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIK
Sbjct: 56 TFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIK 115
Query: 436 YDPSIGIYGLDFYVVL---GGQVST*HKKA*DRKSGISPPPHKEDAMKWFQQKYD 591
YDPSIGI+G+DFYVV+ G +V+ +K G S KED + WF+QKYD
Sbjct: 116 YDPSIGIFGMDFYVVMNRPGARVT--RRKRCKGTVGNSHKTTKEDTVSWFKQKYD 168
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +2
Query: 104 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
++N MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR
Sbjct: 5 AQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVR 55
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 148 bits (358), Expect = 1e-34
Identities = 76/116 (65%), Positives = 88/116 (75%), Gaps = 3/116 (2%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIK
Sbjct: 58 SFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIK 117
Query: 436 YDPSIGIYGLDFYVVL---GGQVST*HKKA*DRKSGISPPPHKEDAMKWFQQKYDG 594
YDPS GIYG+DFYVVL G +V+ ++ + GI K+DAMKWFQ KY+G
Sbjct: 118 YDPSTGIYGMDFYVVLERPGYRVA--RRRRCKTRVGIQHRVTKDDAMKWFQVKYEG 171
Score = 83.0 bits (196), Expect = 6e-15
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = +2
Query: 92 SEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
SE N MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVR
Sbjct: 3 SEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVR 57
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 109 bits (263), Expect = 4e-23
Identities = 51/72 (70%), Positives = 61/72 (84%), Gaps = 2/72 (2%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKI+V CT+RG +A +IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+K
Sbjct: 86 SFGIRRNEKISVFCTIRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLK 145
Query: 436 YDPSIGI--YGL 465
YDP GI YGL
Sbjct: 146 YDPYTGIFRYGL 157
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/54 (66%), Positives = 45/54 (83%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
++ +NVMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVR
Sbjct: 32 QETKENVMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVR 85
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 77.0 bits (181), Expect = 4e-13
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 435
FGIRR E IAV T+RG +A E L++ L+ ++++ +F GN GFGI+EHI + G +
Sbjct: 81 FGIRRGENIAVMVTLRGQRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTR 140
Query: 436 YDPSIGIYGLDFYVVL 483
YDP +GI+G+D + +
Sbjct: 141 YDPRVGIFGMDVILTI 156
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/42 (52%), Positives = 33/42 (78%)
Frame = +2
Query: 131 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIR 79
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 76.6 bits (180), Expect = 5e-13
Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GI 432
+FGIR+ E I + T+RG KA + L+ L V+E L R + G F FGI EHIDL G+
Sbjct: 63 NFGIRKGEAIGIKVTLRGEKALKFLKDALTVKENRLSRKSI-GEGYFAFGIAEHIDLPGV 121
Query: 433 KYDPSIGIYGLDFYVVL---GGQVST*HKKA*DRKSGISPPPHKEDAMKWFQ 579
YDP +GI+G+D V L G +V+ +K K S KED ++W +
Sbjct: 122 DYDPDVGIFGMDVCVSLKRRGYRVARRRRK--KAKIATSHRVTKEDTIRWLE 171
Score = 45.6 bits (103), Expect = 0.001
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Frame = +2
Query: 104 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRLLVSVVMKR 283
++N MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+ +
Sbjct: 12 NENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTI---------K 62
Query: 284 LLSIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIPQLEFMD 463
I + E + K +LRG + + +T R+ S+ + + + L +D
Sbjct: 63 NFGIRKGEAIGIKVTLRGEKALKFLKDALTVKENRLSRKSIGEGYFAFGIAEHIDLPGVD 122
Query: 464 W----------TFTSYLAARFQRSTRRRKTGKVGFPHRLTKK 559
+ S ++ + RRRK K+ HR+TK+
Sbjct: 123 YDPDVGIFGMDVCVSLKRRGYRVARRRRKKAKIATSHRVTKE 164
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 76.2 bits (179), Expect = 7e-13
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GI 432
+F I++NE I T+RG +A++ LE L + + L R F + GN FGI+EH D G+
Sbjct: 52 AFSIKKNEPIGCKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGM 111
Query: 433 KYDPSIGIYGLDFYVVL 483
KYDP+IG++G+D VV+
Sbjct: 112 KYDPNIGVFGMDVTVVI 128
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +2
Query: 110 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTV 253
NVMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+
Sbjct: 3 NVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTL 50
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 74.9 bits (176), Expect = 2e-12
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGL---KVREYELRRDNFSATGNFGFGIQEHIDL 426
+FGIR+ I + T+RG KAEE L+ K L +F GNF FG+ EHID
Sbjct: 59 AFGIRKKLPIGLKVTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDF 118
Query: 427 -GIKYDPSIGIYGLDFYVVLGGQVST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYD 591
G KYDPS+GIYG+D V + S K+ K P H K++A+++ Q K+D
Sbjct: 119 PGQKYDPSVGIYGMDICVTF--EKSGYRVKSRKVKRSHIPEKHLVTKDEAIEYIQAKFD 175
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +2
Query: 107 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT 250
K M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T
Sbjct: 9 KEPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQT 56
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GI 432
+F I++NE I T+RG +A+E L ++ E L R F + GN FGI+EH D G+
Sbjct: 52 AFSIKKNEPIGCKVTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGM 111
Query: 433 KYDPSIGIYGLDFYVVL 483
+YDP+IG++G+D VVL
Sbjct: 112 RYDPNIGVFGMDVTVVL 128
Score = 37.1 bits (82), Expect = 0.37
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +2
Query: 110 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTV 253
N MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+
Sbjct: 3 NPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTL 50
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = -2
Query: 594 TIIFLLEPLHSIFFVRRWGNPTFPXXXXXXXXXXLAAKYD-VKVQSINSN*GIVLDTQVN 418
+I+ LLEP +F F + +D V++ ++N++ +VLDTQ++
Sbjct: 10 SIVSLLEPSDGVFLGSLVRVTDFRLTSLSSGDSGTWSTHDNVEIHTVNTDTWVVLDTQID 69
Query: 417 VFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFFCFSSSDCTMDSNLFITTDTK 259
VFL+TE ++T EV Q +F D QT +DFF +++ +DSNLF+++DT+
Sbjct: 70 VFLDTETEVTGSREVSVSQLVFLDLQTSFQDFFSLWTTNSNVDSNLFVSSDTE 122
Score = 37.5 bits (83), Expect = 0.28
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = -1
Query: 262 QKTHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHYI 110
+ + + SLG L+ +L Q+LG + Q VT FTN ++Q + D++ H +
Sbjct: 122 ESSDSVSSLGLNWSLTRQLFQNLGSSGQSVTRFTNRNIQDQFLDLQFTHRV 172
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 72.1 bits (169), Expect = 1e-11
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Frame = +1
Query: 244 VYSASFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHID 423
V + FGIR+ + IA T+RG KA++ +E L+ ++ F A GN FGI+EHID
Sbjct: 47 VTNPEFGIRKRQPIACKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHID 106
Query: 424 L-GIKYDPSIGIYGLDFYVVLGGQVST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYD 591
+ G+KY+P IGI+G++ V K+ +K P H KE+ MK+ + ++
Sbjct: 107 IPGMKYNPDIGIFGMNVSVTFEKPGYRIAKRRIQQKK--VPAKHRISKEETMKYMEDNFN 164
Score = 39.5 bits (88), Expect = 0.069
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 110 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPV--FSK 238
N M + I K ++I VGE+G++L+RA +LEQ+ Q PV FSK
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSK 46
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 70.1 bits (164), Expect = 4e-11
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GI 432
+FG+R+ E IAV T+RG KA L+R L + ++ + GN FGI+EHI + G+
Sbjct: 74 AFGVRKGENIAVMVTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGV 133
Query: 433 KYDPSIGIYGLDFYVVL 483
KYDP +GI G+D + +
Sbjct: 134 KYDPRVGILGMDVAITI 150
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/50 (56%), Positives = 40/50 (80%)
Frame = +2
Query: 107 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
++ MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R
Sbjct: 24 RSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIR 73
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 435
+G+R+ E I V T+RG A+ +L+R L+ + + F GN+ FGI+EHID+ G+K
Sbjct: 57 WGVRKGEPIGVAVTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVK 116
Query: 436 YDPSIGIYGLDFYVVL 483
Y+PSIGI GL V L
Sbjct: 117 YEPSIGILGLGISVTL 132
Score = 41.1 bits (92), Expect = 0.023
Identities = 18/51 (35%), Positives = 35/51 (68%)
Frame = +2
Query: 104 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+++ M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R
Sbjct: 5 TESPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQR 55
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 435
FG+R+ E I T+RG A + R + + +++ +F GNF FGI EHID+ GIK
Sbjct: 53 FGVRKGEPIGAAVTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIK 112
Query: 436 YDPSIGIYGLDFYVVL 483
YDP IGI GLD + L
Sbjct: 113 YDPGIGILGLDVCMTL 128
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 66.1 bits (154), Expect = 7e-10
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Frame = +1
Query: 259 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 435
F IR + I T+R AEE L+ L + E L F TGNF FG++EH + +
Sbjct: 62 FDIREGDPIGAKVTLRDEMAEEFLQTALPLAE--LATSQFDDTGNFSFGVEEHTEFPSQE 119
Query: 436 YDPSIGIYGLDFYVVLGGQVST*HKKA*DRKSGISPPPHK---EDAMKWFQQKYD 591
YDPSIGIYGLD V L K+ D+ S P H+ DA+ + + YD
Sbjct: 120 YDPSIGIYGLDVTVNLVRPGYRVAKR--DKASRSIPTKHRLNPADAVAFIESTYD 172
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 116 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTV 253
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTV 59
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 435
FGIRR E I + T+R +A L R L ++ LR ++F+A GN FGI+EHI + G +
Sbjct: 80 FGIRRGEPIGLLVTLRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSR 138
Query: 436 YDPSIGIYGLDFYVVL 483
YDP++GI+G D V L
Sbjct: 139 YDPALGIFGFDVAVTL 154
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/47 (38%), Positives = 33/47 (70%)
Frame = +2
Query: 116 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIK 78
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
+F IRR E I+ C++ K L + LK++ + + NFS T FG GI +H++LG
Sbjct: 48 TFSIRRGEYISCFCSLSKKKGILFLYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYN 107
Query: 436 YDPSIGIYGLD 468
+D IGI+G++
Sbjct: 108 FDQKIGIHGIN 118
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 62.9 bits (146), Expect = 7e-09
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Frame = +1
Query: 262 GIRRNEKIAVHCTVRGA-KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGI-K 435
G R I T+R A K + L+ VRE L NF +GN FGI ++ D K
Sbjct: 50 GTRLGAPIGCKVTIRDADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQK 109
Query: 436 YDPSIGIYGLDFYVVL---GGQVST*HKKA*DRKSGISPPPHKEDAMKWFQQKY 588
YDP IGIYG+D VVL G +VS ++ K G+ K+++ WF+ ++
Sbjct: 110 YDPDIGIYGMDVNVVLERPGHRVSRRRRRG--VKVGVEHRVGKDESKAWFKDQF 161
Score = 40.3 bits (90), Expect = 0.040
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +2
Query: 131 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNR 47
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 62.5 bits (145), Expect = 9e-09
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Frame = +1
Query: 265 IRRNEKIAVHCTVRGAKAEEIL-ERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKY 438
IR I V T+RG KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KY
Sbjct: 55 IRPGLPIGVKVTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKY 113
Query: 439 DPSIGIYGLDFYVVLGGQVST*HKKA*DR-KSGISPPPHKEDAMKWFQQK 585
DP +G+ GL+ YV L ++ R K G +KE+ +KW Q++
Sbjct: 114 DPELGLIGLEAYVTLERPGYRVERRRIKRSKVGSRHRLNKEEIIKWAQEE 163
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +2
Query: 116 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTV 253
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRV 50
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 58.4 bits (135), Expect = 1e-07
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 259 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 435
F IR+ I V T+R A L+ ++Y++ +F GN FGI ++ D G+K
Sbjct: 57 FNIRKGLNIGVKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMK 116
Query: 436 YDPSIGIYGLDFYVVLGGQVST*HKKA*DRKSGISPPPH--KEDAMKWFQQKYD 591
YDP IGI+G+D +V + +K +K I KE+ +K+ Q+ ++
Sbjct: 117 YDPDIGIFGMDIAIVFRRRGGYRIEKRRIKKMHIPKKMRISKEETIKYLQENFN 170
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +2
Query: 98 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ ++N MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR
Sbjct: 3 ETTENSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVR 55
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = -2
Query: 489 AAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFF-CF 313
A ++DV++ +++ +VLD +VNVF +TE ++TRG EV +F F + L++
Sbjct: 75 ALQHDVEIHTVDPCGRVVLDAEVNVFADTETEVTRGAEVALEEFEFLHLEPALQNLHRLV 134
Query: 312 SSSDCTMDSNLFITTDTKR 256
++ + +LF+T + +R
Sbjct: 135 PVTNGDVRGDLFVTANAER 153
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = -1
Query: 262 QKTHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHYIFRII 98
++ H + LG+ RLL+ +LLQHL + +T N +V+ +L + PH + R++
Sbjct: 152 ERAHGVARLGEDRLLTGQLLQHLRRLREAITALANANVEHELVNADRPHRVLRLV 206
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 41.5 bits (93), Expect = 0.017
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +1
Query: 253 ASFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 414
A F +R + V T+RG K +R + +V+++ + R+ F GN+ FG+QE
Sbjct: 74 AGFKVREGMPVGVRVTLRGEKMYNFFDRLVSMALPRVKDFRGVPRNGFDGRGNYNFGLQE 133
Query: 415 HIDL-GIKYDPSIGIYGLDFYVVLGGQ 492
+ + YD + I+G++ VV +
Sbjct: 134 QLIFPEVSYDSVMQIHGMNITVVTSAE 160
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 41.5 bits (93), Expect = 0.017
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Frame = +1
Query: 253 ASFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 414
A F +R + I H T+RG + E +R L ++R++ L + F GN+ FG+ E
Sbjct: 84 AQFKLREGQPIGCHVTLRGDRMWEFADRLLTLALPRIRDFRGLNSNQFDGKGNYTFGLSE 143
Query: 415 HI-DLGIKYDPSIGIYGLDFYVVLGGQVS 498
+ L I D + I G+D V Q +
Sbjct: 144 QVMFLEIDQDKIVRIRGMDITFVTTAQTN 172
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 40.3 bits (90), Expect = 0.040
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 271 RNEKIAVHCTVRGAKAEEILERGLKVREYEL 363
R KIA + TV+G KA +LE GLKV+EYEL
Sbjct: 114 RYTKIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 40.3 bits (90), Expect = 0.040
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = -2
Query: 489 AAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKD 325
A K V+V +I+++ +VLD ++NVF + E +++ GGE QF D + L D
Sbjct: 74 ARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDAEAALDD 128
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 39.5 bits (88), Expect = 0.069
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +1
Query: 253 ASFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 414
A+F R+ + T+RG K E L+R + +++++ L F GN+ FGI+E
Sbjct: 76 ANFKTRKGTNAGLKVTLRGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKE 135
Query: 415 HIDL-GIKYDPSIGIYGLDFYVVL 483
HI + +D I GLD VV+
Sbjct: 136 HIIFPEVNFDRIDKIRGLDIVVVI 159
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 36.7 bits (81), Expect = 0.49
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +2
Query: 107 KNVMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTV 253
KNVM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V
Sbjct: 23 KNVMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNV 73
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 36.7 bits (81), Expect = 0.49
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +1
Query: 322 EILERGLKVREYELRR--DNFSATGNFGFGIQEH---IDLGIKYDPSIGIYGLDFYVVLG 486
E+LE+GLK EY + S +G G GI+ H +D GIK D +IG +D Y G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTV 253
E N KN+ + + K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++
Sbjct: 23 EFNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSI 78
Score = 33.9 bits (74), Expect = 3.5
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = +1
Query: 253 ASFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 414
++F IR+ I + T+RGA+ L + + KVR++ L ++F GN+ FG+ E
Sbjct: 79 SNFKIRKGMPIGLKVTLRGARMYNFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFGLSE 138
Query: 415 HIDL-GIKYDPSIGIYGLDFYVV 480
+ + D I G+D +V
Sbjct: 139 QLVFPELNPDEVRRIQGMDITIV 161
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +2
Query: 110 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTV 253
NVM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++
Sbjct: 24 NVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSI 74
>UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n=5;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Chara vulgaris (Common stonewort)
Length = 189
Score = 34.7 bits (76), Expect = 2.0
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +1
Query: 253 ASFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 414
A F IR+ + V T+RG L+R + ++++++ L +F GNF FGI+E
Sbjct: 76 AGFQIRKKMPVGVCVTLRGETMYAFLDRLIHLALPRIKDFQGLNWKSFDGYGNFHFGIRE 135
Query: 415 HIDL-GIKYDPSIGIYGLDFYVVLGGQVST 501
+ I YD I G++ ++ T
Sbjct: 136 QLIFPEIHYDKIDKIRGMNISIITSCHTDT 165
>UniRef50_Q6R7Z5 Cluster: Cathepsin B-like cysteine protease; n=8;
Trypanosoma|Rep: Cathepsin B-like cysteine protease -
Trypanosoma brucei
Length = 340
Score = 34.3 bits (75), Expect = 2.6
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Frame = +2
Query: 125 LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKA--RYTVRLLVSVVMKRLLSIV 298
+H+ + C+ C+ + AA V E PV SKA RL + + ++
Sbjct: 1 MHLMRACITFCIASTAVVAVNAALVAE----DAPVLSKAFVDRVNRLNRGIWKAKYDGVM 56
Query: 299 QSEELKQKKSLRGV*KSENMNCGV------TTSPPRVILASVFKNTLTWVS-STIPQL 451
Q+ L++ K L GV K N N + T R L S F + W + TIPQ+
Sbjct: 57 QNITLREAKRLNGVIKKNN-NASILPKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQI 113
>UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep:
Serine protease - Bombyx mori (Silk moth)
Length = 392
Score = 34.3 bits (75), Expect = 2.6
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 271 RNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFG-IQEHIDLGI-KYDP 444
R+ A HCT R KAEE+ R + EY+++R N+S T NF I++H I Y
Sbjct: 193 RHVLTAAHCTRRW-KAEELFVR---LGEYDMKRTNYSRTYNFKVSEIRQHEAFQIANYKN 248
Query: 445 SIGIYGLDFYVVLGGQV 495
I I L+ V V
Sbjct: 249 DIAILKLERPAVFNAYV 265
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 34.3 bits (75), Expect = 2.6
Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Frame = +2
Query: 107 KNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTV 253
K+VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++
Sbjct: 23 KSVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSI 74
>UniRef50_Q11UJ1 Cluster: Endoglucanase, glycoside hydrolase family
9 protein; n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
Endoglucanase, glycoside hydrolase family 9 protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 854
Score = 33.5 bits (73), Expect = 4.6
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 229 YRLLSCELLQHLGGTSQPVTG-FTNTDVQAKLSDMKIPHYIFRI 101
+ + + ++ L G PVTG ++ TD+Q LSD+K Y+ R+
Sbjct: 796 FEITAKPIILDLNGREYPVTGDWSTTDIQLNLSDLKAGMYLIRL 839
>UniRef50_A1IRF2 Cluster: Putative uncharacterized protein; n=3;
Neisseria meningitidis|Rep: Putative uncharacterized
protein - Neisseria meningitidis serogroup A
Length = 457
Score = 33.5 bits (73), Expect = 4.6
Identities = 18/67 (26%), Positives = 38/67 (56%)
Frame = +2
Query: 167 SGDRLTRAAKVLEQLTGQQPVFSKARYTVRLLVSVVMKRLLSIVQSEELKQKKSLRGV*K 346
+G+ L RA K++EQ+ QQ +K ++++ + ++ + +L V+ +E +QK+ G
Sbjct: 321 NGNGLKRA-KIVEQIHNQQNNRNKQQHSLTFQIKLLFQMMLDGVEKDEFEQKRRFAGKDD 379
Query: 347 SENMNCG 367
+ N G
Sbjct: 380 AVNQMLG 386
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 33.5 bits (73), Expect = 4.6
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 181 DSCRQGVGATHRTTACIFQG*VYSASFGIRRNEKIAVHCT-VRGAKAEEILERGLKVREY 357
D + +GAT++ I Y + F I + A+ T + +E+ +R +R +
Sbjct: 153 DDASRAMGATYKGKL-IGNLDSYMSCFQINPQVQHAIASTGIILTNDDEMAKRARLIRNH 211
Query: 358 ELRRDNFSATGNFGFGIQEHIDLGIKYD 441
+ D+F GN G+ + + +D+G KYD
Sbjct: 212 AIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_A2E755 Cluster: Dynein heavy chain family protein; n=2;
Eukaryota|Rep: Dynein heavy chain family protein -
Trichomonas vaginalis G3
Length = 4660
Score = 33.5 bits (73), Expect = 4.6
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 368 VTTSPPRVILASVFKNTLTWVSSTIPQLEFMDWTFTSYLAARFQRSTR-RRKTGKVGF 538
+T PP A++ + L+ TI QLE +W Y+ A F + + RRK G +G+
Sbjct: 4124 LTNEPPAGAKANLKRTILSLNQQTIEQLEVSEWRRLIYVLAFFNTTVQERRKFGPLGW 4181
>UniRef50_Q4SFT0 Cluster: Chromosome 7 SCAF14601, whole genome
shotgun sequence; n=8; Euteleostei|Rep: Chromosome 7
SCAF14601, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 762
Score = 33.1 bits (72), Expect = 6.0
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = -2
Query: 432 DTQVNVFLNTEAKITRGGEV-VTPQFIFSDFQTPLKDFFCFSSSDCTMDSNLFITTDTKR 256
D + L+ E T ++ VT FI + QTP +D CT DS + + +
Sbjct: 646 DECIRYALDAEGIKTTNPKIPVTDNFICTGGQTPFRDHIA-----CTGDSGGAVFKNYEH 700
Query: 255 RTVYLALENTGCCPVSCSNTLAARVSLSPDSPTQMFK 145
RTV +AL + G + S L V S D +FK
Sbjct: 701 RTVQVALVSWGTKSLCKSGELKESVKNSRDFHLNLFK 737
>UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77;
Bacteria|Rep: 50S ribosomal protein L5 - Desulfotalea
psychrophila
Length = 179
Score = 33.1 bits (72), Expect = 6.0
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1
Query: 253 ASFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 414
A+F +R I T+RG K + L + + +VR++ + F GN+ GIQE
Sbjct: 75 ATFKLREGMPIGCRVTLRGEKMYDFLSKLVNIALPRVRDFRGVSPKGFDGRGNYSMGIQE 134
Query: 415 HIDL-GIKYDPSIGIYGLDFYVVLGGQVS 498
I I YD I G + +V + +
Sbjct: 135 QIIFPEIDYDKIDKIKGFNITIVTSAKTN 163
>UniRef50_Q66106 Cluster: Coat protein; n=21; Ilarvirus subgroup
2|Rep: Coat protein - Citrus leaf rugose virus
Length = 217
Score = 32.7 bits (71), Expect = 8.0
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +2
Query: 344 KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIPQL-EFMDWTF-TSYLAARFQRSTRRR 517
+S N G + P R+++ S+ +T+TW S Q EF ++F ++ +A+ ++ R
Sbjct: 35 RSRNWAQGQRSQPQRMVVGSMPIDTITWKSFPGEQWHEFSGFSFPDAWGSAKIAYASMRT 94
Query: 518 KTGKVGFPHRLTK 556
+ GK+ H TK
Sbjct: 95 ELGKIKSLHHTTK 107
>UniRef50_Q080D5 Cluster: Putative uncharacterized protein
precursor; n=1; Shewanella frigidimarina NCIMB 400|Rep:
Putative uncharacterized protein precursor - Shewanella
frigidimarina (strain NCIMB 400)
Length = 416
Score = 32.7 bits (71), Expect = 8.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 244 VYSASFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATG 390
+Y+ASF I +N K+ +HC ILE+ LK + L + + TG
Sbjct: 223 IYNASFSINKNAKVIIHCGY-----SHILEKNLKDKRIWLANELANITG 266
>UniRef50_O52507 Cluster: Serrawettin synthase; n=1; Serratia
liquefaciens|Rep: Serrawettin synthase - Serratia
liquefaciens
Length = 895
Score = 32.7 bits (71), Expect = 8.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +3
Query: 423 LGYQVRSLNWNLWTGLLRRTWRPGFNVAQEGVRQEK 530
LG RS W+ LLRR PGF+ QEG K
Sbjct: 699 LGLDTRSRAWSTVVALLRRDTSPGFDEGQEGAAAVK 734
>UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong
sub-class; n=2; Oryza sativa|Rep: Transposon protein,
putative, Pong sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 596
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 277 EKIAVHCTVRGAKAEEILERGLK 345
EKIA + TVRG KA ++LE GLK
Sbjct: 280 EKIACYVTVRGEKAMQLLESGLK 302
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 32.7 bits (71), Expect = 8.0
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 107 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTV 253
KN+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++
Sbjct: 21 KNIMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSI 68
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,766,768
Number of Sequences: 1657284
Number of extensions: 12275001
Number of successful extensions: 32888
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 31759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32850
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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