Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00226
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 179 7e-45
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 179 7e-45
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 179 7e-45
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 179 7e-45
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 179 7e-45
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 179 7e-45
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 172 8e-43
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 171 1e-42
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 154 2e-37
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 2e-13
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 30 8.3
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 30 8.3
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 30 8.3
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 179 bits (436), Expect = 7e-45
Identities = 91/117 (77%), Positives = 98/117 (83%), Gaps = 4/117 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 59 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 118
Query: 436 YDPSIGIYGLDFYVVLGGQ-VST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYDG 594
YDPSIGIYGLDFYVVLG S KK R++G H KE+AM+WFQQKYDG
Sbjct: 119 YDPSIGIYGLDFYVVLGRPGFSIADKK---RRTGCIGAKHRISKEEAMRWFQQKYDG 172
Score = 95.1 bits (226), Expect = 2e-19
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 58
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 179 bits (436), Expect = 7e-45
Identities = 91/117 (77%), Positives = 98/117 (83%), Gaps = 4/117 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 58 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 117
Query: 436 YDPSIGIYGLDFYVVLGGQ-VST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYDG 594
YDPSIGIYGLDFYVVLG S KK R++G H KE+AM+WFQQKYDG
Sbjct: 118 YDPSIGIYGLDFYVVLGRPGFSIADKK---RRTGCIGAKHRISKEEAMRWFQQKYDG 171
Score = 95.1 bits (226), Expect = 2e-19
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 4 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 57
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 179 bits (436), Expect = 7e-45
Identities = 91/117 (77%), Positives = 98/117 (83%), Gaps = 4/117 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 58 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 117
Query: 436 YDPSIGIYGLDFYVVLGGQ-VST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYDG 594
YDPSIGIYGLDFYVVLG S KK R++G H KE+AM+WFQQKYDG
Sbjct: 118 YDPSIGIYGLDFYVVLGRPGFSIADKK---RRTGCIGAKHRISKEEAMRWFQQKYDG 171
Score = 93.1 bits (221), Expect = 8e-19
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ +N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 4 QGEKENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVR 57
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 179 bits (436), Expect = 7e-45
Identities = 91/117 (77%), Positives = 98/117 (83%), Gaps = 4/117 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 59 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 118
Query: 436 YDPSIGIYGLDFYVVLGGQ-VST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYDG 594
YDPSIGIYGLDFYVVLG S KK R++G H KE+AM+WFQQKYDG
Sbjct: 119 YDPSIGIYGLDFYVVLGRPGFSIADKK---RRTGCIGAKHRISKEEAMRWFQQKYDG 172
Score = 95.1 bits (226), Expect = 2e-19
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 58
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 179 bits (436), Expect = 7e-45
Identities = 91/117 (77%), Positives = 98/117 (83%), Gaps = 4/117 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 57 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 116
Query: 436 YDPSIGIYGLDFYVVLGGQ-VST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYDG 594
YDPSIGIYGLDFYVVLG S KK R++G H KE+AM+WFQQKYDG
Sbjct: 117 YDPSIGIYGLDFYVVLGRPGFSIADKK---RRTGCIGAKHRISKEEAMRWFQQKYDG 170
Score = 95.1 bits (226), Expect = 2e-19
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 3 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 56
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 179 bits (436), Expect = 7e-45
Identities = 91/117 (77%), Positives = 98/117 (83%), Gaps = 4/117 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 58 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 117
Query: 436 YDPSIGIYGLDFYVVLGGQ-VST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYDG 594
YDPSIGIYGLDFYVVLG S KK R++G H KE+AM+WFQQKYDG
Sbjct: 118 YDPSIGIYGLDFYVVLGRPGFSIADKK---RRTGCIGAKHRISKEEAMRWFQQKYDG 171
Score = 95.1 bits (226), Expect = 2e-19
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 4 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 57
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 172 bits (419), Expect = 8e-43
Identities = 88/117 (75%), Positives = 96/117 (82%), Gaps = 4/117 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHC VRGAKAEEILE+GLKVRE ELR++NFS TGNFGFGIQEHIDLGI+
Sbjct: 59 SFGIRRNEKIAVHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIE 118
Query: 436 YDPSIGIYGLDFYVVLGGQ-VST*HKKA*DRKSGISPPPH---KEDAMKWFQQKYDG 594
YDPSIGIYGLDFYVVLG S KK R++G H KE+AM+WFQQKYDG
Sbjct: 119 YDPSIGIYGLDFYVVLGRPGFSIADKK---RRTGCIGAKHRISKEEAMRWFQQKYDG 172
Score = 92.3 bits (219), Expect = 1e-18
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ +N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVR 58
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 171 bits (417), Expect = 1e-42
Identities = 88/114 (77%), Positives = 95/114 (83%), Gaps = 4/114 (3%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 57 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 116
Query: 436 YDPSIGIYGLDFYVVLGGQ-VST*HKKA*DRKSGISPPPH---KEDAMKWFQQK 585
YDPSIGIYGLDFYVVLG S KK R++G H KE+AM+WFQQK
Sbjct: 117 YDPSIGIYGLDFYVVLGRPGFSIADKK---RRTGCIGAKHRISKEEAMRWFQQK 167
Score = 95.1 bits (226), Expect = 2e-19
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 3 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 56
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 154 bits (374), Expect = 2e-37
Identities = 71/75 (94%), Positives = 74/75 (98%)
Frame = +1
Query: 256 SFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 435
SFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIK
Sbjct: 57 SFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIK 116
Query: 436 YDPSIGIYGLDFYVV 480
YDPSIGIYGLDFYVV
Sbjct: 117 YDPSIGIYGLDFYVV 131
Score = 95.1 bits (226), Expect = 2e-19
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 95 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 256
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVR
Sbjct: 3 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVR 56
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 2e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2
Query: 131 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 238
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 443 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 294
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1737 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1786
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 443 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 294
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 386 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 435
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 443 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 294
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1478 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1527
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 443 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 294
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1560 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1609
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,568,974
Number of Sequences: 237096
Number of extensions: 1885754
Number of successful extensions: 3678
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3662
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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