Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00224
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   2.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.4  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 529 IAEGRDHLLYHLRTQISLHPF 467
           I E + HL YHLR      PF
Sbjct: 239 ITEYKHHLEYHLRNHAGSKPF 259


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu
          protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 37 NSNLEVNHGHQQVVYHQV 90
          N N E N+ H   +YH+V
Sbjct: 32 NQNTEQNYTHNNEMYHRV 49


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
          transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 37 NSNLEVNHGHQQVVYHQV 90
          N N E N+ H   +YH+V
Sbjct: 32 NQNTEQNYTHNNEMYHRV 49


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 37 NSNLEVNHGHQQVVYHQV 90
          N N E N+ H   +YH V
Sbjct: 32 NQNTEHNYTHNNEMYHSV 49


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 517 RDHLLYHLRTQISLHPF 467
           + HL YHLR      PF
Sbjct: 1   KHHLEYHLRNHAGSKPF 17


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 280 LFNFNLKTKNILFVVTLF*NDNTLLL 357
           L++FN   K ++FVV+L  N    ++
Sbjct: 72  LYSFNTFAKLLIFVVSLSGNSAVFIM 97


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 199 DRLCSIENKKNRFFKAFLNASLNFKSLY 116
           + + +++ K N F KAFL+A     S+Y
Sbjct: 187 EEVTALKIKYNPFAKAFLDAKERPDSIY 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,055
Number of Sequences: 336
Number of extensions: 3453
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)