Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00223
         (801 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20979-1|AAA76736.1|  938|Homo sapiens chromatin assembly factor...    45   4e-04
BC067093-1|AAH67093.1|  956|Homo sapiens chromatin assembly fact...    45   4e-04
AF190465-2|AAF04291.1|  938|Homo sapiens chromatin assembly fact...    45   4e-04

>U20979-1|AAA76736.1|  938|Homo sapiens chromatin assembly factor-I
           p150 subunit protein.
          Length = 938

 Score = 44.8 bits (101), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = +3

Query: 513 YWGTWRKKTTFVKPRKPFGQDEKQLXXXXXXXXXXXXXXXXXSIDGSAVGSDDEQDGDEY 692
           YWGTW KKT  ++ R P+ QD K L                 S+  S    DD+   DE 
Sbjct: 552 YWGTWNKKTALIRARDPWAQDTKLLDYEVDSDEEWEEEEPGESLSHSEGDDDDDMGEDED 611

Query: 693 EVD 701
           E D
Sbjct: 612 EDD 614


>BC067093-1|AAH67093.1|  956|Homo sapiens chromatin assembly factor
           1, subunit A (p150) protein.
          Length = 956

 Score = 44.8 bits (101), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = +3

Query: 513 YWGTWRKKTTFVKPRKPFGQDEKQLXXXXXXXXXXXXXXXXXSIDGSAVGSDDEQDGDEY 692
           YWGTW KKT  ++ R P+ QD K L                 S+  S    DD+   DE 
Sbjct: 570 YWGTWNKKTALIRARDPWAQDTKLLDYEVDSDEEWEEEEPGESLSHSEGDDDDDMGEDED 629

Query: 693 EVD 701
           E D
Sbjct: 630 EDD 632


>AF190465-2|AAF04291.1|  938|Homo sapiens chromatin assembly
           factor-I p150 subunit protein.
          Length = 938

 Score = 44.8 bits (101), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = +3

Query: 513 YWGTWRKKTTFVKPRKPFGQDEKQLXXXXXXXXXXXXXXXXXSIDGSAVGSDDEQDGDEY 692
           YWGTW KKT  ++ R P+ QD K L                 S+  S    DD+   DE 
Sbjct: 552 YWGTWNKKTALIRARDPWAQDTKLLDYEVDSDEEWEEEEPGESLSHSEGDDDDDMGEDED 611

Query: 693 EVD 701
           E D
Sbjct: 612 EDD 614


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,700,135
Number of Sequences: 237096
Number of extensions: 1745898
Number of successful extensions: 7622
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7622
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)