Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00220
(801 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 27 0.15
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 1.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 1.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.9
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 3.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 4.4
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 7.6
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 22 7.6
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 7.6
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 7.6
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 27.5 bits (58), Expect = 0.15
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 166 GWLVAFSIQPHLLYLVWYPH 225
G+L+A +QP L++ +W PH
Sbjct: 162 GFLLAGIVQPFLIHWIWTPH 181
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 178 AFSIQPHLLYLVWYPHSVTLGEGRS 252
A +Q H+ Y W S +GEG+S
Sbjct: 1276 ATDLQQHVEYQFWVTGSTRVGEGQS 1300
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/34 (29%), Positives = 13/34 (38%)
Frame = +2
Query: 134 HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSH 235
HG L SH L+C +Y + SH
Sbjct: 1445 HGNLDELQLSRHATSHELKGLLCGNTYQLYLTSH 1478
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 178 AFSIQPHLLYLVWYPHSVTLGEGRS 252
A +Q H+ Y W S +GEG+S
Sbjct: 1272 ATDLQQHVEYQFWVTGSTRVGEGQS 1296
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/34 (29%), Positives = 13/34 (38%)
Frame = +2
Query: 134 HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSH 235
HG L SH L+C +Y + SH
Sbjct: 1441 HGNLDELQLSRHATSHELKGLLCGNTYQLYLTSH 1474
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 429 CNKIYL*IGLNITIQKTLVFYS 364
C++ YL I NIT+++ +FY+
Sbjct: 227 CDEPYLDITFNITMRRKTLFYT 248
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 429 CNKIYL*IGLNITIQKTLVFYS 364
C++ YL I NIT+++ +FY+
Sbjct: 227 CDEPYLDITFNITMRRKTLFYT 248
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 429 CNKIYL*IGLNITIQKTLVFYS 364
C++ YL I NIT+++ +FY+
Sbjct: 223 CDEPYLDITFNITMRRKTLFYT 244
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 3.3
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 399 NITIQKTLVFYSHYMNIQKLPKTESEHPTFHMVLSALLLMY 277
N+T+ + S+Y I L + PT+ L LMY
Sbjct: 628 NVTLSTKCPYPSYYSYIGVLTLVATSMPTYICYLGKAYLMY 668
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 4.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 184 SIQPHLLYLVWY 219
S+ P +LYL WY
Sbjct: 803 SVIPRILYLTWY 814
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.6
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 184 SIQPHLLYLVWYPHSVTLGE 243
+I+P+ Y +W+P + G+
Sbjct: 138 NIEPYNNYYIWHPGKIVNGK 157
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 434 LNAIKSIYKLD*I*QYKKLSCF 369
L+ +KS+Y+ + Q KKL CF
Sbjct: 34 LSDLKSMYESNSEEQMKKLGCF 55
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.6
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 184 SIQPHLLYLVWYPHSVTLGE 243
+I+P+ Y +W+P + G+
Sbjct: 138 NIEPYNNYYIWHPGKIVNGK 157
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 119 GGRAALPAAPEIIQNQTRWGERRSPLS 39
GG P I+ ++ W ER P+S
Sbjct: 58 GGVQVSPVQENIVIDKRPWWERYQPIS 84
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,914
Number of Sequences: 438
Number of extensions: 5803
Number of successful extensions: 32
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -