Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00218
(775 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 3.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 5.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 5.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 5.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 5.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 5.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 5.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 5.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 5.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 5.5
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 5.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 7.3
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 22 7.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 7.3
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 9.6
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.6
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 9.6
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 9.6
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 140 CNIQHNKNDLKREIHGSDTGHTPTCIVNIHTN 235
C + HN KR IH + HT + + H N
Sbjct: 573 CEMIHNAQVNKRSIHNNYPVHTFGRLTSKHDN 604
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 761 KFLLSITYTQQKNSFHNNYMIIYF 690
K + S++ N+++NNY +Y+
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYY 103
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 761 KFLLSITYTQQKNSFHNNYMIIYF 690
K + S++ N+++NNY +Y+
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYY 103
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 761 KFLLSITYTQQKNSFHNNYMIIYF 690
K + S++ N+++NNY +Y+
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYY 103
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 761 KFLLSITYTQQKNSFHNNYMIIYF 690
K + S++ N+++NNY +Y+
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYY 103
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 761 KFLLSITYTQQKNSFHNNYMIIYF 690
K + S++ N+++NNY +Y+
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLYY 336
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 761 KFLLSITYTQQKNSFHNNYMIIYF 690
K + S++ N+++NNY +Y+
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLYY 336
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 761 KFLLSITYTQQKNSFHNNYMIIYF 690
K + S++ N+++NNY +Y+
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLYY 336
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 761 KFLLSITYTQQKNSFHNNYMIIYF 690
K + S++ N+++NNY +Y+
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLYY 336
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 761 KFLLSITYTQQKNSFHNNYMIIYF 690
K + S++ N+++NNY +Y+
Sbjct: 302 KIISSLSNNYNYNNYNNNYKPLYY 325
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 22.2 bits (45), Expect = 5.5
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -2
Query: 234 LVWIFTIHVGVCPVSEPWISRF--RSFLLCC 148
L+W +TI + PV W RF FL C
Sbjct: 168 LIWTYTIPWALMPVMGVW-GRFVPEGFLTSC 197
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 192 SEPWISRFRSFLLC 151
+E WI ++R FL C
Sbjct: 419 TEVWIPKWRQFLYC 432
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 228 ILINVYNAK*VGLFVTLSPLKYATN 302
+L + Y+AK F+T+ L + TN
Sbjct: 370 LLFSKYDAKKRNFFITMFDLDFLTN 394
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 7.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 740 YTQQKNSFHNNYMIIYF 690
Y N+++NNY +Y+
Sbjct: 337 YNNYNNNYNNNYKKLYY 353
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 104 SNIN*VVLNCRRCNIQHNKNDLKREIH 184
+N+N ++LN R N +++ K IH
Sbjct: 405 ANVNELILNTRCENPDNDRTPFKISIH 431
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 200 VLYLNHGSRASGHFYYVVCYIVCNLTLLNL 111
VL L+ S AS + ++C + LTL+ L
Sbjct: 19 VLSLSLTSLASSLIFTILCILTLALTLVTL 48
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 200 VLYLNHGSRASGHFYYVVCYIVCNLTLLNL 111
VL L+ S AS + ++C + LTL+ L
Sbjct: 19 VLSLSLTSLASSLIFTILCILTLALTLVTL 48
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 200 VLYLNHGSRASGHFYYVVCYIVCNLTLLNL 111
VL L+ S AS + ++C + LTL+ L
Sbjct: 19 VLSLSLTSLASSLIFTILCILTLALTLVTL 48
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 200 VLYLNHGSRASGHFYYVVCYIVCNLTLLNL 111
VL L+ S AS + ++C + LTL+ L
Sbjct: 19 VLSLSLTSLASSLIFTILCILTLALTLVTL 48
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 104 SNIN*VVLNCRRCNIQHNKNDLKREIH 184
+N+N ++LN R N +++ K IH
Sbjct: 405 ANVNELILNTRCENPDNDRTPFKISIH 431
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 104 SNIN*VVLNCRRCNIQHNKNDLKREIH 184
+N+N ++LN R N +++ K IH
Sbjct: 405 ANVNELILNTRCENPDNDRTPFKISIH 431
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,781
Number of Sequences: 438
Number of extensions: 4687
Number of successful extensions: 27
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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