Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00217
(531 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellul... 159 5e-38
UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellu... 152 4e-36
UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3; Eukaryo... 94 2e-18
UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36; Archa... 89 8e-17
UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S riboso... 88 1e-16
UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7; Archae... 86 4e-16
UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2; Thermoprote... 85 1e-15
UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10; Therm... 81 2e-14
UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcu... 60 3e-08
UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|R... 58 2e-07
UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38... 42 0.007
UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellu... 41 0.016
UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellu... 41 0.021
UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellul... 40 0.027
UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellu... 40 0.036
UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacte... 40 0.047
UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14; ... 40 0.047
UniRef50_Q9LNP8 Cluster: F1L3.27; n=14; Magnoliophyta|Rep: F1L3.... 39 0.063
UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14; ... 38 0.11
UniRef50_Q9UX96 Cluster: Putative uncharacterized protein ORF-c1... 37 0.25
UniRef50_UPI0001552A8A Cluster: PREDICTED: hypothetical protein ... 34 1.8
UniRef50_UPI0000E8063D Cluster: PREDICTED: hypothetical protein;... 34 2.4
UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthu... 33 3.1
UniRef50_Q7XDK6 Cluster: Retrotransposon protein, putative, Ty3-... 33 4.1
UniRef50_UPI00005882DA Cluster: PREDICTED: hypothetical protein;... 32 9.5
UniRef50_A6PT16 Cluster: Mammalian cell entry related domain pro... 32 9.5
UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1; Croceib... 32 9.5
UniRef50_Q9G8Z6 Cluster: Ribosomal protein L14; n=1; Ochromonas ... 32 9.5
UniRef50_A2RAW1 Cluster: Contig An18c0160, complete genome; n=1;... 32 9.5
>UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellular
organisms|Rep: 60S ribosomal protein L23 - Drosophila
melanogaster (Fruit fly)
Length = 140
Score = 159 bits (385), Expect = 5e-38
Identities = 76/82 (92%), Positives = 78/82 (95%)
Frame = +2
Query: 8 GRKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKP 187
G KFRISLGLPVGAV+NCADNTGAKNLYVIAV GI+GRLNRLPAAG GDM VATVKKGKP
Sbjct: 11 GGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKP 70
Query: 188 ELRKKVMPAVVIRQRKPFRRRD 253
ELRKKVMPAVVIRQRKPFRRRD
Sbjct: 71 ELRKKVMPAVVIRQRKPFRRRD 92
Score = 86.2 bits (204), Expect = 4e-16
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +1
Query: 256 VFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 369
VFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 94 VFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellular
organisms|Rep: 60S ribosomal protein L23 - Homo sapiens
(Human)
Length = 140
Score = 152 bits (369), Expect = 4e-36
Identities = 73/87 (83%), Positives = 81/87 (93%), Gaps = 1/87 (1%)
Frame = +2
Query: 8 GRKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKP 187
G KFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKP
Sbjct: 11 GAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKP 70
Query: 188 ELRKKVMPAVVIRQRKPFRRRD-EYLY 265
ELRKKV PAVVIRQRK +RR+D +LY
Sbjct: 71 ELRKKVHPAVVIRQRKSYRRKDGVFLY 97
Score = 85.4 bits (202), Expect = 7e-16
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 256 VFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 369
VF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 94 VFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3;
Eukaryota|Rep: 60S ribosomal protein L23 -
Encephalitozoon cuniculi
Length = 146
Score = 93.9 bits (223), Expect = 2e-18
Identities = 44/80 (55%), Positives = 61/80 (76%)
Frame = +2
Query: 14 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPEL 193
+++++ G+ V ++ CADN+GAK L I V+ +GRLNRLPAA GD+ V +VKKGKPEL
Sbjct: 19 RYKMTRGIQVETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPGDICVVSVKKGKPEL 78
Query: 194 RKKVMPAVVIRQRKPFRRRD 253
RKKV A++IRQ+K +RR D
Sbjct: 79 RKKVHYAILIRQKKIWRRTD 98
Score = 58.4 bits (135), Expect = 1e-07
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = +1
Query: 262 IYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 369
I FEDNA V++NNKGE++G+ I GPV +E AD+WP+
Sbjct: 102 IMFEDNAAVLINNKGELRGAQIAGPVPREVADMWPK 137
>UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36;
Archaea|Rep: 50S ribosomal protein L14P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 132
Score = 88.6 bits (210), Expect = 8e-17
Identities = 42/83 (50%), Positives = 58/83 (69%)
Frame = +2
Query: 5 RGRKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGK 184
+G + I L GA I C DNTGAK + +I+V+ +G NR+P AG GDM V +VKKG
Sbjct: 2 KGIRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGT 61
Query: 185 PELRKKVMPAVVIRQRKPFRRRD 253
PE+RK+++ AVV+RQ++ FRR D
Sbjct: 62 PEMRKQILLAVVVRQKQEFRRPD 84
Score = 39.5 bits (88), Expect = 0.047
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 262 IYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 369
+ FEDNA VI + G KG+ I GPVA+E A+ +P+
Sbjct: 88 VSFEDNAMVITDEDGIPKGTDIKGPVAREVAERFPK 123
>UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S ribosomal
protein L23; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L23 - Macaca mulatta
Length = 98
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/63 (66%), Positives = 51/63 (80%)
Frame = +2
Query: 14 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPEL 193
KFRISLGLP GAVIN AD+TGAK+LY+I+ +GI GRLNRLPAA G M++ TVKK +
Sbjct: 13 KFRISLGLPAGAVINYADSTGAKSLYIISRKGINGRLNRLPAADVGYMVITTVKKRQTRA 72
Query: 194 RKK 202
+KK
Sbjct: 73 QKK 75
>UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7;
Archaea|Rep: 50S ribosomal protein L14P - Pyrococcus
horikoshii
Length = 141
Score = 86.2 bits (204), Expect = 4e-16
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +2
Query: 20 RISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRK 199
R + +P+GA + ADN+GAK + VI V G RL +AG GDM+VATVKKG+P++R
Sbjct: 16 RPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRH 75
Query: 200 KVMPAVVIRQRKPFRRRD 253
+V+ AV+IRQRK +RR D
Sbjct: 76 QVVRAVIIRQRKEYRRLD 93
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 262 IYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 369
+ FEDNA VIV +G +G+ I GPVA+E A+ W R
Sbjct: 97 VKFEDNAAVIVTPEGVPRGTEIRGPVAREAAEKWVR 132
>UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2;
Thermoprotei|Rep: Ribosomal protein L14 - Cenarchaeum
symbiosum
Length = 144
Score = 85.0 bits (201), Expect = 1e-15
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +2
Query: 23 ISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 202
++ LPVGA + CADN+GAK L +I VQ K R++RLPAA GD + VKKG ELRK+
Sbjct: 20 VTRALPVGARVTCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDYVNVVVKKGPAELRKQ 79
Query: 203 VMPAVVIRQRKPFRR 247
V AV+IRQ+ P RR
Sbjct: 80 VHGAVIIRQKYPVRR 94
Score = 49.2 bits (112), Expect = 6e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +1
Query: 256 VFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 369
V + FEDNA V+ +GEMKG+ I GPVA E ++ WPR
Sbjct: 98 VRVAFEDNAAVLTTPEGEMKGTDIKGPVAAEASEKWPR 135
>UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10;
Thermoprotei|Rep: 50S ribosomal protein L14P -
Pyrobaculum aerophilum
Length = 144
Score = 80.6 bits (190), Expect = 2e-14
Identities = 37/82 (45%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +2
Query: 14 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRL--NRLPAAGSGDMIVATVKKGKP 187
+F ++ G+ + +++ ADN+GAK + VI V G + R+P AG GDM+V V++GKP
Sbjct: 15 RFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKP 74
Query: 188 ELRKKVMPAVVIRQRKPFRRRD 253
ELRK++ A+V+RQR+P+RR D
Sbjct: 75 ELRKQIFRAIVVRQRRPYRRPD 96
Score = 42.7 bits (96), Expect = 0.005
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 259 FIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWP 366
++ FEDNA VIV +G+ KGS I GPVA E WP
Sbjct: 99 WVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWP 134
>UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcus
tauri|Rep: Ribosomal protein L23 - Ostreococcus tauri
Length = 93
Score = 60.1 bits (139), Expect = 3e-08
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = +2
Query: 8 GRKFRISLGLPVGAVINCADNTGAKNLYVIAVQ 106
G K+++S GLPVGAV+NCADNTGAKNLY+IAV+
Sbjct: 51 GTKYKMSYGLPVGAVVNCADNTGAKNLYMIAVK 83
>UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|Rep:
Ribosomal protein L23 - Siniperca chuatsi (Chinese
perch)
Length = 46
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 8 GRKFRISLGLPVGAVINCADNTGAKNL 88
G KFRISLGLPVGAVINCADNTGAKNL
Sbjct: 20 GAKFRISLGLPVGAVINCADNTGAKNL 46
>UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 148
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/70 (45%), Positives = 37/70 (52%)
Frame = -1
Query: 246 LLNGFRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIPWTAITYRFFAPVL 67
L G+ CL+ TA T F +S PF T SP A G+L L T IT + FAP L
Sbjct: 57 LRTGYFCLIITAPYTCFLNSAGPFFTTTLQKSPTDAEGNLDALVLCLGTLITSKIFAPEL 116
Query: 66 SAQLITAPTG 37
SA I APTG
Sbjct: 117 SAHTIFAPTG 126
Score = 39.1 bits (87), Expect = 0.063
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = -2
Query: 374 AIRGHRSAHSLATGPVMAEPFISPLLLTMTPALSSK 267
A GH S S ATGP+M+ PF+SP + T ALSSK
Sbjct: 14 ATLGHFSEASAATGPLMSVPFVSPSGVINTAALSSK 49
>UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38
(Yml38), putative; n=13; Dikarya|Rep: Mitochondrial 60s
ribosomal protein l38 (Yml38), putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 149
Score = 42.3 bits (95), Expect = 0.007
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 232 ETVQKA**VFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 348
+T Q+ + F+D+A V++NNKGEM G+ I GPVA E
Sbjct: 86 KTTQRPDGSVVRFDDSAAVLLNNKGEMLGTRIVGPVASE 124
>UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellular
organisms|Rep: 50S ribosomal protein L14 - Deinococcus
radiodurans
Length = 134
Score = 41.1 bits (92), Expect = 0.016
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +1
Query: 262 IYFEDNAGVIVNNKGEMKGSAITGPVAKECAD 357
I F+ NA VI+NN+GE +G+ + GPVA+E D
Sbjct: 89 IRFDRNAAVIINNQGEPRGTRVFGPVARELRD 120
>UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellular
organisms|Rep: 50S ribosomal protein L14 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 122
Score = 40.7 bits (91), Expect = 0.021
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 53 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 223
+ ADNTGA+ + I V G G R AG GD+I +VK+ P R K + AVV+
Sbjct: 8 LEVADNTGAREVLCIKVLG--GSKRRY--AGIGDIIKVSVKEATPRGRVKKGEIYNAVVV 63
Query: 224 RQRKPFRRRD 253
R K RR+D
Sbjct: 64 RTAKGVRRQD 73
Score = 32.7 bits (71), Expect = 5.4
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 262 IYFEDNAGVIVNNKGEMKGSAITGPVAKE 348
I F+ NA V++NNK E G+ I GPV +E
Sbjct: 77 IKFDGNAAVLLNNKLEPIGTRIFGPVTRE 105
>UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellular
organisms|Rep: 50S ribosomal protein L14 - Streptococcus
pneumoniae
Length = 122
Score = 40.3 bits (90), Expect = 0.027
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +2
Query: 53 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKP--ELRK-KVMPAVVI 223
+ ADN+GA+ + I V G GR A GD+IVA+VK+ P ++K V+ AV++
Sbjct: 8 LKVADNSGAREILTIKVLGGSGR----KFANIGDVIVASVKQATPGGAVKKGDVVKAVIV 63
Query: 224 RQRKPFRRRD 253
R + RR D
Sbjct: 64 RTKSGARRAD 73
>UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellular
organisms|Rep: 50S ribosomal protein L14 - Leptospira
interrogans
Length = 130
Score = 39.9 bits (89), Expect = 0.036
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 259 FIYFEDNAGVIVNNKGEMKGSAITGPVAKECAD 357
+I F+DNA I+++KG KG+ I GPVA+E D
Sbjct: 84 YIRFDDNACAIIDDKGNPKGTRIFGPVARELRD 116
>UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacter
autotrophicus Py2|Rep: Ribosomal protein L14 -
Xanthobacter sp. (strain Py2)
Length = 144
Score = 39.5 bits (88), Expect = 0.047
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 53 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 223
++ ADN+GA+ + I V G R A GD+IV +VK+ P R K VM AVV+
Sbjct: 8 LDVADNSGARRVMCIKVLGGSKR----KYAHVGDIIVVSVKEAIPRGRVKKGDVMKAVVV 63
Query: 224 RQRKPFRRRD 253
R K RR D
Sbjct: 64 RTAKDIRRVD 73
>UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14;
n=151; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Arabidopsis thaliana (Mouse-ear cress)
Length = 122
Score = 39.5 bits (88), Expect = 0.047
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 53 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPEL---RKKVMPAVVI 223
+N ADN+GA+ L I + G R A GD+IVA +K+ P R +V+ AV++
Sbjct: 8 LNVADNSGARELMCIRIIGASNR----RYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIV 63
Query: 224 RQRKPFRRRD 253
R K +R +
Sbjct: 64 RTCKELKRNN 73
>UniRef50_Q9LNP8 Cluster: F1L3.27; n=14; Magnoliophyta|Rep: F1L3.27
- Arabidopsis thaliana (Mouse-ear cress)
Length = 201
Score = 39.1 bits (87), Expect = 0.063
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +2
Query: 35 LPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKV 205
+ +G ++ C DN+ AK V+ +Q ++G+ A GD+IV +VK+ P ++KKV
Sbjct: 54 IQMGTILKCVDNSCAKE--VMCIQSLRGK----KGARLGDIIVGSVKEANPIVQKKV 104
>UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14;
n=64; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Guillardia theta (Cryptomonas phi)
Length = 121
Score = 38.3 bits (85), Expect = 0.11
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 53 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPEL---RKKVMPAVVI 223
+ ADN+GAK + I + G G NR A GD+I+ VK P + R V+ AV++
Sbjct: 8 LTVADNSGAKKIMCIRILG--G--NR-KYASIGDVIIGVVKDATPNMPVKRSDVVRAVIM 62
Query: 224 RQRKPFRRRD 253
R + RR+D
Sbjct: 63 RTKNTIRRKD 72
Score = 37.5 bits (83), Expect = 0.19
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 235 TVQKA**VFIYFEDNAGVIVNNKGEMKGSAITGPVAKECAD 357
T+++ + I F+DNA VI+N + +G+ + GP+A+E D
Sbjct: 67 TIRRKDGMSIRFDDNAAVIINKENNPRGTRVFGPIARELRD 107
>UniRef50_Q9UX96 Cluster: Putative uncharacterized protein
ORF-c10_023; n=2; Archaea|Rep: Putative uncharacterized
protein ORF-c10_023 - Sulfolobus solfataricus
Length = 107
Score = 37.1 bits (82), Expect = 0.25
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = -2
Query: 374 AIRGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYIN 258
AI GH SA SLA GP+ + PF P +T ALSSK I+
Sbjct: 20 AIFGHLSAASLAIGPLTSVPFGVPSGFIITTALSSKEIH 58
Score = 33.5 bits (73), Expect = 3.1
Identities = 22/58 (37%), Positives = 28/58 (48%)
Frame = -1
Query: 285 TRIVLKVYKYSSRLLNGFRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPL 112
T + K S LL G CL TA F +SG+PFL +S A G+L + PL
Sbjct: 50 TALSSKEIHVPSGLLYGILCLTITALNFCFLTSGVPFLIDTITISAMLANGTLLKTPL 107
>UniRef50_UPI0001552A8A Cluster: PREDICTED: hypothetical protein
LOC78256; n=1; Mus musculus|Rep: PREDICTED: hypothetical
protein LOC78256 - Mus musculus
Length = 191
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -1
Query: 273 LKVYKYSSRLLNGFRCLMTTAGITFFRSSGLPF-LTVATIMSPEPAAGSLFRRPLIPWTA 97
LK + + L F T+ SS P + +AT+ SP P + + +RPL +T
Sbjct: 76 LKRHYRNKGLFTWFYSWCLTSSSAHVGSSARPCAIKIATVYSPSPGSSAWTQRPL-AFTL 134
Query: 96 ITYRFFAPVLS 64
+TY+F+ +L+
Sbjct: 135 VTYQFYTDLLT 145
>UniRef50_UPI0000E8063D Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 350
Score = 33.9 bits (74), Expect = 2.4
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +1
Query: 34 SPSGSSNQLRRQHRGKESVCDRCPRYQRSPEQTAGGRFRGHDCGHSQKG*T*TPEKGNAG 213
+P +N++RR RG + V D+C + T G G D G S+ PE+G G
Sbjct: 198 APLSPANEMRRGGRGSDPVTDKCGEANGKRQLTGRGPI-GGDAGESE-----APERGGVG 251
Query: 214 SGHQA 228
+A
Sbjct: 252 VAERA 256
>UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthus
orientalis|Rep: HUELLENLOS-like protein - Hyacinthus
orientalis (Common hyacinth)
Length = 171
Score = 33.5 bits (73), Expect = 3.1
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 262 IYFEDNAGVIVNNKGEMKGSAITGPVAKE 348
I F+DNA V+VN +GE G+ + GPV E
Sbjct: 126 IKFDDNAVVLVNKQGEPIGTRVFGPVPHE 154
>UniRef50_Q7XDK6 Cluster: Retrotransposon protein, putative,
Ty3-gypsy subclass; n=15; Oryza sativa|Rep:
Retrotransposon protein, putative, Ty3-gypsy subclass -
Oryza sativa subsp. japonica (Rice)
Length = 1734
Score = 33.1 bits (72), Expect = 4.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 4 PREEIPYLPGSPSGSSNQLRRQHRGKESVCDRCPRYQRSPEQTAGGRFRGHDCGH 168
P+++ P GS GS+N R+H+ +E V P Y++ P + C H
Sbjct: 522 PKKDAPTAGGS--GSNNHKDRKHKPEELVATTSPSYRQRPRVNTFDKIMNSQCPH 574
>UniRef50_UPI00005882DA Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 365
Score = 31.9 bits (69), Expect = 9.5
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 413 ISSCVLLSFPSTSKSNPKNYNLRNRH 490
I+SC+ S+ +TS +NP++YN + H
Sbjct: 170 ITSCIYSSYDNTSSNNPRSYNTSSYH 195
>UniRef50_A6PT16 Cluster: Mammalian cell entry related domain
protein precursor; n=1; Victivallis vadensis ATCC
BAA-548|Rep: Mammalian cell entry related domain protein
precursor - Victivallis vadensis ATCC BAA-548
Length = 326
Score = 31.9 bits (69), Expect = 9.5
Identities = 25/86 (29%), Positives = 34/86 (39%)
Frame = -1
Query: 258 YSSRLLNGFRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIPWTAITYRFF 79
+ S L G RC + AGIT R + PEP AG+ IP ++R
Sbjct: 108 FRSELEQGMRCRLEYAGITGMRYIDFDYFATPGQELPEPPAGTGPEVLYIPAVPSSFRDI 167
Query: 78 APVLSAQLITAPTGRPREIRNFLPRN 1
L+ L R EI + L R+
Sbjct: 168 LKALNTSLDRISRIRFEEISDGLERS 193
>UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1;
Croceibacter atlanticus HTCC2559|Rep: 50S ribosomal
protein L14 - Croceibacter atlanticus HTCC2559
Length = 135
Score = 31.9 bits (69), Expect = 9.5
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -2
Query: 356 SAHSLATGPVMAEPFISPLLLTMTPALSSKYI 261
S SLATGP P ISP+ T ALSSK I
Sbjct: 27 SRSSLATGPKTRVPLISPVGFNNTHALSSKRI 58
>UniRef50_Q9G8Z6 Cluster: Ribosomal protein L14; n=1; Ochromonas
danica|Rep: Ribosomal protein L14 - Ochromonas danica
Length = 127
Score = 31.9 bits (69), Expect = 9.5
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 44 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 223
G+ +N DN+G K + I V G G R A SGD+I+A++K K + K+ V+
Sbjct: 5 GSYLNVIDNSGVKQIACIHVFG--GYRKRY--AKSGDLIMASIKSIKYKQNIKLKKGDVV 60
Query: 224 R 226
R
Sbjct: 61 R 61
>UniRef50_A2RAW1 Cluster: Contig An18c0160, complete genome; n=1;
Aspergillus niger|Rep: Contig An18c0160, complete genome
- Aspergillus niger
Length = 757
Score = 31.9 bits (69), Expect = 9.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -1
Query: 369 TRPQISTFFGYRPCDGRAL---HFALVIDYDTRIVLKVYKYSSRLLNGFRCLMTTAGITF 199
TRP +S +PC GR + H+ ++D +T + L + S + R LM TF
Sbjct: 509 TRPPLSI----KPCPGRIITEQHWYRIVDPETNMYLPQFNVCSACVRNLRVLMPQHRDTF 564
Query: 198 FRSS 187
RSS
Sbjct: 565 KRSS 568
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,128,243
Number of Sequences: 1657284
Number of extensions: 11052849
Number of successful extensions: 30481
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30474
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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