Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00217
         (531 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.1  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   5.1  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.8  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 46   SHWETQGDTEFPPA 5
            ++W TQG T  PPA
Sbjct: 1077 TNWPTQGTTIPPPA 1090


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
 Frame = +2

Query: 341 PKNVLICGRVLPQTRALSLEYTFKIS----SCVLLSFPSTSKSNPKNY 472
           P   +IC RVL    AL + Y          C +     T+K N K +
Sbjct: 134 PNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTH 181


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = +2

Query: 101 VQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 223
           +QG       +   G+   ++  VKK KPE+    + A ++
Sbjct: 144 IQGTASEATLVALLGAKARMIDRVKKEKPEMSDSEIVAKLV 184


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 96  ITYRFFAPVLSAQLITAPTGRP 31
           I  RF +  + A L+T+P  RP
Sbjct: 225 IVERFTSDRVHAALVTSPRARP 246


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 401 YTFKISSCVLLSFPSTSKSNPK 466
           Y F++    +L  PS++ S+P+
Sbjct: 272 YNFRVPQHQVLQSPSSTSSSPE 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,360
Number of Sequences: 336
Number of extensions: 2781
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)