Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00214
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061221-1|AAL28769.1|  201|Drosophila melanogaster LD16419p pro...   130   3e-30
AE014296-3251|AAF49090.1|  201|Drosophila melanogaster CG7823-PA...   130   3e-30

>AY061221-1|AAL28769.1|  201|Drosophila melanogaster LD16419p
           protein.
          Length = 201

 Score =  130 bits (313), Expect = 3e-30
 Identities = 58/78 (74%), Positives = 67/78 (85%)
 Frame = +2

Query: 500 FYRQREIVHGLKYVQKTYRLGVPVDKMTHMVGSYPPKIEIQSYTTPPEDAPSGMMARGSY 679
           F  QREIVHGLKYVQKT RLGV VDKM HMVGSYPPK EIQ Y TP E+APSG  +RG+Y
Sbjct: 114 FIVQREIVHGLKYVQKTSRLGVNVDKMKHMVGSYPPKKEIQFYLTPAEEAPSGTFSRGTY 173

Query: 680 SVNSLFTDDDKNVHLQWE 733
           SV+S+FTDDDK++HL+W+
Sbjct: 174 SVSSVFTDDDKHIHLEWD 191



 Score =  115 bits (276), Expect = 8e-26
 Identities = 58/85 (68%), Positives = 65/85 (76%)
 Frame = +3

Query: 255 EILAADQEDESLRKYKEALLGQAQAGAVIVEPDDPRKVIVKKLALCVVGRXXXXXXXXXX 434
           EI+AADQEDESLR+YKEALLG AQ   +IVEP+DPRKVIVKKLAL V GR          
Sbjct: 32  EIMAADQEDESLRRYKEALLGAAQTEKIIVEPNDPRKVIVKKLALVVEGRDDMELDLTGD 91

Query: 435 XXXXKKQVFVIKEGVQYRIRIDFIV 509
               KKQ+FVIKEGVQY++RIDFIV
Sbjct: 92  LSQLKKQLFVIKEGVQYKVRIDFIV 116


>AE014296-3251|AAF49090.1|  201|Drosophila melanogaster CG7823-PA
           protein.
          Length = 201

 Score =  130 bits (313), Expect = 3e-30
 Identities = 58/78 (74%), Positives = 67/78 (85%)
 Frame = +2

Query: 500 FYRQREIVHGLKYVQKTYRLGVPVDKMTHMVGSYPPKIEIQSYTTPPEDAPSGMMARGSY 679
           F  QREIVHGLKYVQKT RLGV VDKM HMVGSYPPK EIQ Y TP E+APSG  +RG+Y
Sbjct: 114 FIVQREIVHGLKYVQKTSRLGVNVDKMKHMVGSYPPKKEIQFYLTPAEEAPSGTFSRGTY 173

Query: 680 SVNSLFTDDDKNVHLQWE 733
           SV+S+FTDDDK++HL+W+
Sbjct: 174 SVSSVFTDDDKHIHLEWD 191



 Score =  115 bits (276), Expect = 8e-26
 Identities = 58/85 (68%), Positives = 65/85 (76%)
 Frame = +3

Query: 255 EILAADQEDESLRKYKEALLGQAQAGAVIVEPDDPRKVIVKKLALCVVGRXXXXXXXXXX 434
           EI+AADQEDESLR+YKEALLG AQ   +IVEP+DPRKVIVKKLAL V GR          
Sbjct: 32  EIMAADQEDESLRRYKEALLGAAQTEKIIVEPNDPRKVIVKKLALVVEGRDDMELDLTGD 91

Query: 435 XXXXKKQVFVIKEGVQYRIRIDFIV 509
               KKQ+FVIKEGVQY++RIDFIV
Sbjct: 92  LSQLKKQLFVIKEGVQYKVRIDFIV 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,561,625
Number of Sequences: 53049
Number of extensions: 647430
Number of successful extensions: 1736
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)