Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00213
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.68 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   2.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +3

Query: 75   KPTRLWWSPCSEKPKQTTRIRSRRMLC*KSTPRTFCRPT 191
            KP+  WWS  +  P  TT    R      +T  T  RPT
Sbjct: 1038 KPST-WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPT 1075


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 57  TVGSMSWKRACTISVTSS 4
           T  S+SW   C+I+ TSS
Sbjct: 173 TGNSLSWNNPCSINSTSS 190


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 8   LVTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVV 154
           LV++  + L +L E     + R+ DKA  E L    ++   NK++K VV
Sbjct: 530 LVSVTKEGL-ELPEDEEEKKKREEDKAKFEGLCKVMKSILDNKVEKVVV 577


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 423 YDNVEISVFFFLCLI 467
           Y NV    FF+ CLI
Sbjct: 180 YTNVSTDAFFYTCLI 194


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 46  GTHCHHPRPSNRQGSGGVPARKSPNRLQ 129
           G H     PS   G+GG+P +    R Q
Sbjct: 255 GLHATGSAPSPTAGAGGLPPQVPSPRSQ 282


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 585 SGIRNIQGHTITHFLEGQREHTSVN 511
           + +RN+Q HT    ++ ++ H   N
Sbjct: 102 NSVRNVQQHTFADLIQLEQIHLDDN 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,341
Number of Sequences: 336
Number of extensions: 4288
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)