Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00213
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    27   0.49 
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   3.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.0  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   8.0  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.0  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +2

Query: 53  TVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLK----VDTENFLSPDTCGGIELVAA 220
           T  +R  +T+K+L E+L G +QT+     K+   L+     D       D   G  LVA+
Sbjct: 142 TTRLRAERTEKSLKEALEGCSQTETPVNGKRGRNLRSTEEADDAKRAKNDAPSGSSLVAS 201

Query: 221 RGRIKISNTLEFAWS 265
            G     N  + +WS
Sbjct: 202 AGCGPEMNETKGSWS 216


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = -3

Query: 160 FQHNILLDLILV-VCLGFSEQGLHQSLVGLTDADG--DSGFHELEE 32
           ++H +  D I   VC+   E   + S +G  +ADG  D G  ++ +
Sbjct: 668 YRHGLPYDQIATWVCIAHRESSYNVSAIGRLNADGSEDHGLFQISD 713



 Score = 23.4 bits (48), Expect = 8.0
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 157 QHNILLDLILV-VCLGFSEQGLHQSLVGLTDADGDSGFHEL 38
           +H + ++ I   VC+ + E   + S  G  +ADG SG H L
Sbjct: 192 RHRMPIEQIATWVCIAYHESRFNTSAEGRLNADG-SGDHGL 231


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 37  PAHGTHCHHPRPSNRQGSGG 96
           P H TH HH    +  G GG
Sbjct: 278 PTHQTHHHHHHHQHGGGVGG 297


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 37  PAHGTHCHHPRPSNRQGSGG 96
           P H TH HH    +  G GG
Sbjct: 278 PTHQTHHHHHHHQHGGGVGG 297


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 37  PAHGTHCHHPRPSNRQGSGG 96
           P H TH HH    +  G GG
Sbjct: 230 PTHQTHHHHHHHQHGGGVGG 249


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,936
Number of Sequences: 2352
Number of extensions: 17683
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)