Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00213
(777 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U38951-1|AAB09739.1| 226|Drosophila melanogaster vacuolar ATPas... 92 9e-19
U38198-1|AAB09738.1| 226|Drosophila melanogaster V-ATPase subun... 92 9e-19
AF145618-1|AAD38593.1| 226|Drosophila melanogaster BcDNA.GH0368... 92 9e-19
AE014297-290|AAF51997.1| 226|Drosophila melanogaster CG1088-PB,... 92 9e-19
AE014297-289|AAF51998.1| 226|Drosophila melanogaster CG1088-PA,... 92 9e-19
AE014296-161|AAF47434.1| 841|Drosophila melanogaster CG13908-PA... 33 0.33
>U38951-1|AAB09739.1| 226|Drosophila melanogaster vacuolar ATPase
subunit E protein.
Length = 226
Score = 91.9 bits (218), Expect = 9e-19
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +2
Query: 5 LLVTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLS 184
+L LIVQ LFQ+MEP V +R R+ D LV ++L A YK +I ++V L +D ++FLS
Sbjct: 115 VLTKLIVQGLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLS 174
Query: 185 PDTCGGIELVAARGRIKISNTLE 253
DTCGG+EL+A GRIK+ NTLE
Sbjct: 175 ADTCGGVELLALNGRIKVPNTLE 197
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 256 RLELIAQQLLPEIRNALFGRNPNRKFTD 339
RL+LI+QQL+PEIRNALFGRN NRKFTD
Sbjct: 199 RLDLISQQLVPEIRNALFGRNVNRKFTD 226
>U38198-1|AAB09738.1| 226|Drosophila melanogaster V-ATPase subunit
E protein.
Length = 226
Score = 91.9 bits (218), Expect = 9e-19
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +2
Query: 5 LLVTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLS 184
+L LIVQ LFQ+MEP V +R R+ D LV ++L A YK +I ++V L +D ++FLS
Sbjct: 115 VLTKLIVQGLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLS 174
Query: 185 PDTCGGIELVAARGRIKISNTLE 253
DTCGG+EL+A GRIK+ NTLE
Sbjct: 175 ADTCGGVELLALNGRIKVPNTLE 197
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 256 RLELIAQQLLPEIRNALFGRNPNRKFTD 339
RL+LI+QQL+PEIRNALFGRN NRKFTD
Sbjct: 199 RLDLISQQLVPEIRNALFGRNVNRKFTD 226
>AF145618-1|AAD38593.1| 226|Drosophila melanogaster BcDNA.GH03683
protein.
Length = 226
Score = 91.9 bits (218), Expect = 9e-19
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +2
Query: 5 LLVTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLS 184
+L LIVQ LFQ+MEP V +R R+ D LV ++L A YK +I ++V L +D ++FLS
Sbjct: 115 VLTKLIVQGLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLS 174
Query: 185 PDTCGGIELVAARGRIKISNTLE 253
DTCGG+EL+A GRIK+ NTLE
Sbjct: 175 ADTCGGVELLALNGRIKVPNTLE 197
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 256 RLELIAQQLLPEIRNALFGRNPNRKFTD 339
RL+LI+QQL+PEIRNALFGRN NRKFTD
Sbjct: 199 RLDLISQQLVPEIRNALFGRNVNRKFTD 226
>AE014297-290|AAF51997.1| 226|Drosophila melanogaster CG1088-PB,
isoform B protein.
Length = 226
Score = 91.9 bits (218), Expect = 9e-19
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +2
Query: 5 LLVTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLS 184
+L LIVQ LFQ+MEP V +R R+ D LV ++L A YK +I ++V L +D ++FLS
Sbjct: 115 VLTKLIVQGLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLS 174
Query: 185 PDTCGGIELVAARGRIKISNTLE 253
DTCGG+EL+A GRIK+ NTLE
Sbjct: 175 ADTCGGVELLALNGRIKVPNTLE 197
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 256 RLELIAQQLLPEIRNALFGRNPNRKFTD 339
RL+LI+QQL+PEIRNALFGRN NRKFTD
Sbjct: 199 RLDLISQQLVPEIRNALFGRNVNRKFTD 226
>AE014297-289|AAF51998.1| 226|Drosophila melanogaster CG1088-PA,
isoform A protein.
Length = 226
Score = 91.9 bits (218), Expect = 9e-19
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +2
Query: 5 LLVTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLS 184
+L LIVQ LFQ+MEP V +R R+ D LV ++L A YK +I ++V L +D ++FLS
Sbjct: 115 VLTKLIVQGLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLS 174
Query: 185 PDTCGGIELVAARGRIKISNTLE 253
DTCGG+EL+A GRIK+ NTLE
Sbjct: 175 ADTCGGVELLALNGRIKVPNTLE 197
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 256 RLELIAQQLLPEIRNALFGRNPNRKFTD 339
RL+LI+QQL+PEIRNALFGRN NRKFTD
Sbjct: 199 RLDLISQQLVPEIRNALFGRNVNRKFTD 226
>AE014296-161|AAF47434.1| 841|Drosophila melanogaster CG13908-PA
protein.
Length = 841
Score = 33.5 bits (73), Expect = 0.33
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 43 HGTHCHHPRPSNRQGSGGVPARKSPNRLQE*DQEGCCVESRHREL 177
H H H R S RQGSG +P + + C RHR +
Sbjct: 178 HSHHSRHSRRSRRQGSGSLPGAHQGSANHSVMRPSICTSRRHRSV 222
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,627,252
Number of Sequences: 53049
Number of extensions: 791549
Number of successful extensions: 2234
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2234
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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